Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
RAB5BP61020 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RAB5BP61020 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC12.72□□□□□ -0.37
RAB5BP61020 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RAB5BP61020 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RAB5BP61020 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
RAB5BP61020 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
RAB5BP61020 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
RAB5BP61020 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC12.72□□□□□ -0.37
RAB5BP61020 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC12.72□□□□□ -0.37
RAB5BP61020 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC12.72□□□□□ -0.37
RAB5BP61020 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC12.72□□□□□ -0.37
RAB5BP61020 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RAB5BP61020 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC12.72□□□□□ -0.37
RAB5BP61020 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RAB5BP61020 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RAB5BP61020 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RAB5BP61020 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RAB5BP61020 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RAB5BP61020 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC12.72□□□□□ -0.37
RAB5BP61020 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC12.72□□□□□ -0.37
RAB5BP61020 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC12.72□□□□□ -0.37
RAB5BP61020 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC12.72□□□□□ -0.37
RAB5BP61020 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RAB5BP61020 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
RAB5BP61020 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RAB5BP61020 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC12.72□□□□□ -0.37
RAB5BP61020 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
RAB5BP61020 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
RAB5BP61020 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC12.72□□□□□ -0.37
RAB5BP61020 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RAB5BP61020 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RAB5BP61020 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC12.72□□□□□ -0.37
RAB5BP61020 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RAB5BP61020 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
RAB5BP61020 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC12.72□□□□□ -0.37
RAB5BP61020 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RAB5BP61020 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC12.72□□□□□ -0.37
RAB5BP61020 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RAB5BP61020 USP47-202ENST00000339865 7775 ntTSL 2 BASIC12.72□□□□□ -0.37
RAB5BP61020 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
RAB5BP61020 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
RAB5BP61020 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RAB5BP61020 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RAB5BP61020 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
RAB5BP61020 KRT8P7-201ENST00000533003 1432 ntBASIC12.71□□□□□ -0.37
RAB5BP61020 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
RAB5BP61020 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC12.71□□□□□ -0.37
RAB5BP61020 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
RAB5BP61020 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RAB5BP61020 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC12.71□□□□□ -0.37
RAB5BP61020 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RAB5BP61020 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RAB5BP61020 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
RAB5BP61020 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC12.71□□□□□ -0.37
RAB5BP61020 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC12.71□□□□□ -0.37
RAB5BP61020 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RAB5BP61020 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RAB5BP61020 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC12.71□□□□□ -0.37
RAB5BP61020 HSCB-202ENST00000398941 955 ntTSL 2 BASIC12.71□□□□□ -0.37
RAB5BP61020 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC12.71□□□□□ -0.37
RAB5BP61020 MDH2-205ENST00000461263 648 ntTSL 2 BASIC12.71□□□□□ -0.37
RAB5BP61020 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC12.71□□□□□ -0.37
RAB5BP61020 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC12.71□□□□□ -0.37
RAB5BP61020 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC12.71□□□□□ -0.37
RAB5BP61020 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RAB5BP61020 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC12.71□□□□□ -0.37
RAB5BP61020 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC12.71□□□□□ -0.37
RAB5BP61020 AC089987.1-201ENST00000551654 2209 ntBASIC12.71□□□□□ -0.37
RAB5BP61020 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RAB5BP61020 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RAB5BP61020 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
RAB5BP61020 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC12.71□□□□□ -0.37
RAB5BP61020 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
RAB5BP61020 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.38
RAB5BP61020 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC12.71□□□□□ -0.38
RAB5BP61020 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
RAB5BP61020 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
RAB5BP61020 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
RAB5BP61020 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC12.71□□□□□ -0.38
RAB5BP61020 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
RAB5BP61020 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC12.71□□□□□ -0.38
RAB5BP61020 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
RAB5BP61020 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.38
RAB5BP61020 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
RAB5BP61020 RET-205ENST00000615310 4337 ntTSL 5 BASIC12.71□□□□□ -0.38
RAB5BP61020 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
RAB5BP61020 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
RAB5BP61020 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RAB5BP61020 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC12.7□□□□□ -0.38
RAB5BP61020 STK38L-201ENST00000389032 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RAB5BP61020 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
RAB5BP61020 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
RAB5BP61020 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RAB5BP61020 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC12.7□□□□□ -0.38
RAB5BP61020 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
RAB5BP61020 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RAB5BP61020 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
RAB5BP61020 IL21R-204ENST00000564089 3009 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
RAB5BP61020 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms