Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
TRAV5A0A0B4J249 BID-213ENST00000615414 2236 ntTSL 5 BASIC12.68□□□□□ -0.38
TRAV5A0A0B4J249 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TRAV5A0A0B4J249 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TRAV5A0A0B4J249 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRAV5A0A0B4J249 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC12.67□□□□□ -0.38
TRAV5A0A0B4J249 AC006058.4-201ENST00000624016 1670 ntBASIC12.67□□□□□ -0.38
TRAV5A0A0B4J249 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRAV5A0A0B4J249 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC12.67□□□□□ -0.38
TRAV5A0A0B4J249 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC12.67□□□□□ -0.38
TRAV5A0A0B4J249 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TRAV5A0A0B4J249 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TRAV5A0A0B4J249 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRAV5A0A0B4J249 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC12.67□□□□□ -0.38
TRAV5A0A0B4J249 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRAV5A0A0B4J249 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC12.67□□□□□ -0.38
TRAV5A0A0B4J249 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRAV5A0A0B4J249 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC12.67□□□□□ -0.38
TRAV5A0A0B4J249 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRAV5A0A0B4J249 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRAV5A0A0B4J249 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TRAV5A0A0B4J249 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRAV5A0A0B4J249 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TRAV5A0A0B4J249 AC023157.3-201ENST00000619086 2088 ntBASIC12.67□□□□□ -0.38
TRAV5A0A0B4J249 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TRAV5A0A0B4J249 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRAV5A0A0B4J249 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC12.67□□□□□ -0.38
TRAV5A0A0B4J249 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRAV5A0A0B4J249 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRAV5A0A0B4J249 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRAV5A0A0B4J249 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC12.67□□□□□ -0.38
TRAV5A0A0B4J249 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC12.67□□□□□ -0.38
TRAV5A0A0B4J249 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC12.67□□□□□ -0.38
TRAV5A0A0B4J249 ELK2BP-201ENST00000415014 1224 ntBASIC12.67□□□□□ -0.38
TRAV5A0A0B4J249 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRAV5A0A0B4J249 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TRAV5A0A0B4J249 STARD13-205ENST00000439831 945 ntTSL 2 BASIC12.67□□□□□ -0.38
TRAV5A0A0B4J249 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC12.67□□□□□ -0.38
TRAV5A0A0B4J249 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC12.67□□□□□ -0.38
TRAV5A0A0B4J249 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
TRAV5A0A0B4J249 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC12.67□□□□□ -0.38
TRAV5A0A0B4J249 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC12.67□□□□□ -0.38
TRAV5A0A0B4J249 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TRAV5A0A0B4J249 MSRA-206ENST00000521209 814 ntTSL 3 BASIC12.67□□□□□ -0.38
TRAV5A0A0B4J249 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC12.67□□□□□ -0.38
TRAV5A0A0B4J249 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
TRAV5A0A0B4J249 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
TRAV5A0A0B4J249 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
TRAV5A0A0B4J249 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC12.67□□□□□ -0.38
TRAV5A0A0B4J249 AP000550.4-202ENST00000639755 178 ntBASIC12.67□□□□□ -0.38
TRAV5A0A0B4J249 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRAV5A0A0B4J249 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TRAV5A0A0B4J249 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRAV5A0A0B4J249 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC12.67□□□□□ -0.38
TRAV5A0A0B4J249 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
TRAV5A0A0B4J249 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TRAV5A0A0B4J249 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC12.67□□□□□ -0.38
TRAV5A0A0B4J249 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC12.67□□□□□ -0.38
TRAV5A0A0B4J249 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRAV5A0A0B4J249 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TRAV5A0A0B4J249 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRAV5A0A0B4J249 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRAV5A0A0B4J249 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRAV5A0A0B4J249 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC12.67□□□□□ -0.38
TRAV5A0A0B4J249 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRAV5A0A0B4J249 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRAV5A0A0B4J249 CICP13-201ENST00000422015 2789 ntBASIC12.67□□□□□ -0.38
TRAV5A0A0B4J249 TPO-203ENST00000346956 2923 ntTSL 5 BASIC12.67□□□□□ -0.38
TRAV5A0A0B4J249 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRAV5A0A0B4J249 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
TRAV5A0A0B4J249 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC12.67□□□□□ -0.38
TRAV5A0A0B4J249 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TRAV5A0A0B4J249 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
TRAV5A0A0B4J249 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC12.67□□□□□ -0.38
TRAV5A0A0B4J249 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TRAV5A0A0B4J249 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC12.67□□□□□ -0.38
TRAV5A0A0B4J249 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRAV5A0A0B4J249 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
TRAV5A0A0B4J249 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
TRAV5A0A0B4J249 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC12.66□□□□□ -0.38
TRAV5A0A0B4J249 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRAV5A0A0B4J249 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC12.66□□□□□ -0.38
TRAV5A0A0B4J249 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRAV5A0A0B4J249 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
TRAV5A0A0B4J249 AC092919.2-201ENST00000623631 1645 ntBASIC12.66□□□□□ -0.38
TRAV5A0A0B4J249 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRAV5A0A0B4J249 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
TRAV5A0A0B4J249 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRAV5A0A0B4J249 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRAV5A0A0B4J249 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRAV5A0A0B4J249 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
TRAV5A0A0B4J249 GSN-206ENST00000394353 2311 ntTSL 2 BASIC12.66□□□□□ -0.38
TRAV5A0A0B4J249 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
TRAV5A0A0B4J249 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TRAV5A0A0B4J249 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC12.66□□□□□ -0.38
TRAV5A0A0B4J249 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC12.66□□□□□ -0.38
TRAV5A0A0B4J249 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TRAV5A0A0B4J249 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRAV5A0A0B4J249 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRAV5A0A0B4J249 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms