Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLIP2Q9UDT6 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CLIP2Q9UDT6 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CLIP2Q9UDT6 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CLIP2Q9UDT6 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CLIP2Q9UDT6 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
CLIP2Q9UDT6 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLIP2Q9UDT6 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CLIP2Q9UDT6 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLIP2Q9UDT6 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC19.28■□□□□ 0.68
CLIP2Q9UDT6 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLIP2Q9UDT6 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC19.27■□□□□ 0.68
CLIP2Q9UDT6 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC19.27■□□□□ 0.68
CLIP2Q9UDT6 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC19.27■□□□□ 0.68
CLIP2Q9UDT6 GOLGA2P9-201ENST00000596977 1937 ntBASIC19.27■□□□□ 0.68
CLIP2Q9UDT6 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CLIP2Q9UDT6 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
CLIP2Q9UDT6 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC19.27■□□□□ 0.68
CLIP2Q9UDT6 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CLIP2Q9UDT6 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CLIP2Q9UDT6 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
CLIP2Q9UDT6 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CLIP2Q9UDT6 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
CLIP2Q9UDT6 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
CLIP2Q9UDT6 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CLIP2Q9UDT6 CENPM-205ENST00000404067 905 ntTSL 3 BASIC19.27■□□□□ 0.68
CLIP2Q9UDT6 VMO1-203ENST00000416307 712 ntTSL 2 BASIC19.27■□□□□ 0.68
CLIP2Q9UDT6 AC098859.1-201ENST00000502915 1238 ntBASIC19.27■□□□□ 0.68
CLIP2Q9UDT6 FHL2-212ENST00000607522 759 ntTSL 2 BASIC19.27■□□□□ 0.68
CLIP2Q9UDT6 AC020765.3-201ENST00000613051 740 ntBASIC19.27■□□□□ 0.68
CLIP2Q9UDT6 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC19.27■□□□□ 0.68
CLIP2Q9UDT6 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC19.27■□□□□ 0.68
CLIP2Q9UDT6 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CLIP2Q9UDT6 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CLIP2Q9UDT6 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
CLIP2Q9UDT6 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC19.27■□□□□ 0.68
CLIP2Q9UDT6 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CLIP2Q9UDT6 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.67
CLIP2Q9UDT6 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC19.27■□□□□ 0.67
CLIP2Q9UDT6 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC19.27■□□□□ 0.67
CLIP2Q9UDT6 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CLIP2Q9UDT6 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CLIP2Q9UDT6 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
CLIP2Q9UDT6 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
CLIP2Q9UDT6 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC19.27■□□□□ 0.67
CLIP2Q9UDT6 HYMAI-201ENST00000635591 3347 ntBASIC19.27■□□□□ 0.67
CLIP2Q9UDT6 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
CLIP2Q9UDT6 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC19.26■□□□□ 0.67
CLIP2Q9UDT6 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CLIP2Q9UDT6 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC19.26■□□□□ 0.67
CLIP2Q9UDT6 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CLIP2Q9UDT6 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLIP2Q9UDT6 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLIP2Q9UDT6 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLIP2Q9UDT6 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CLIP2Q9UDT6 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CLIP2Q9UDT6 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLIP2Q9UDT6 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CLIP2Q9UDT6 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC19.26■□□□□ 0.67
CLIP2Q9UDT6 AL513523.2-202ENST00000427283 2040 ntBASIC19.26■□□□□ 0.67
CLIP2Q9UDT6 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC19.26■□□□□ 0.67
CLIP2Q9UDT6 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CLIP2Q9UDT6 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLIP2Q9UDT6 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC19.26■□□□□ 0.67
CLIP2Q9UDT6 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC19.26■□□□□ 0.67
CLIP2Q9UDT6 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLIP2Q9UDT6 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC19.26■□□□□ 0.67
CLIP2Q9UDT6 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC19.26■□□□□ 0.67
CLIP2Q9UDT6 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC19.26■□□□□ 0.67
CLIP2Q9UDT6 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC19.26■□□□□ 0.67
CLIP2Q9UDT6 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC19.26■□□□□ 0.67
CLIP2Q9UDT6 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC19.26■□□□□ 0.67
CLIP2Q9UDT6 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CLIP2Q9UDT6 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLIP2Q9UDT6 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLIP2Q9UDT6 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CLIP2Q9UDT6 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CLIP2Q9UDT6 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLIP2Q9UDT6 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC19.26■□□□□ 0.67
CLIP2Q9UDT6 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLIP2Q9UDT6 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
CLIP2Q9UDT6 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLIP2Q9UDT6 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLIP2Q9UDT6 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
CLIP2Q9UDT6 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLIP2Q9UDT6 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLIP2Q9UDT6 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CLIP2Q9UDT6 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLIP2Q9UDT6 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC19.25■□□□□ 0.67
CLIP2Q9UDT6 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
CLIP2Q9UDT6 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
CLIP2Q9UDT6 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CLIP2Q9UDT6 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CLIP2Q9UDT6 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CLIP2Q9UDT6 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CLIP2Q9UDT6 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC19.25■□□□□ 0.67
CLIP2Q9UDT6 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC19.25■□□□□ 0.67
CLIP2Q9UDT6 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CLIP2Q9UDT6 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLIP2Q9UDT6 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms