Protein–RNA interactions for Protein: Q8N9Q2

SREK1IP1, Protein SREK1IP1, humanhuman

Predicted RBP Predictions only

Length 155 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1IP1Q8N9Q2 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC13.5□□□□□ -0.25
SREK1IP1Q8N9Q2 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC13.5□□□□□ -0.25
SREK1IP1Q8N9Q2 PPP1R14BP3-201ENST00000509033 445 ntBASIC13.5□□□□□ -0.25
SREK1IP1Q8N9Q2 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC13.5□□□□□ -0.25
SREK1IP1Q8N9Q2 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC13.5□□□□□ -0.25
SREK1IP1Q8N9Q2 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SREK1IP1Q8N9Q2 IKBKGP1-201ENST00000612193 1073 ntBASIC13.5□□□□□ -0.25
SREK1IP1Q8N9Q2 CREBL2-201ENST00000228865 3754 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SREK1IP1Q8N9Q2 SPG11-202ENST00000427534 6935 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
SREK1IP1Q8N9Q2 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC13.5□□□□□ -0.25
SREK1IP1Q8N9Q2 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC13.5□□□□□ -0.25
SREK1IP1Q8N9Q2 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC13.5□□□□□ -0.25
SREK1IP1Q8N9Q2 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SREK1IP1Q8N9Q2 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
SREK1IP1Q8N9Q2 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
SREK1IP1Q8N9Q2 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SREK1IP1Q8N9Q2 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SREK1IP1Q8N9Q2 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
SREK1IP1Q8N9Q2 HSPA12A-205ENST00000635765 5841 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
SREK1IP1Q8N9Q2 USP24-201ENST00000294383 10549 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
SREK1IP1Q8N9Q2 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SREK1IP1Q8N9Q2 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
SREK1IP1Q8N9Q2 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SREK1IP1Q8N9Q2 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
SREK1IP1Q8N9Q2 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SREK1IP1Q8N9Q2 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC13.49□□□□□ -0.25
SREK1IP1Q8N9Q2 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
SREK1IP1Q8N9Q2 FZD7-201ENST00000286201 3859 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
SREK1IP1Q8N9Q2 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
SREK1IP1Q8N9Q2 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC13.49□□□□□ -0.25
SREK1IP1Q8N9Q2 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
SREK1IP1Q8N9Q2 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SREK1IP1Q8N9Q2 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SREK1IP1Q8N9Q2 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
SREK1IP1Q8N9Q2 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SREK1IP1Q8N9Q2 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SREK1IP1Q8N9Q2 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC13.49□□□□□ -0.25
SREK1IP1Q8N9Q2 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
SREK1IP1Q8N9Q2 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SREK1IP1Q8N9Q2 PPT1-213ENST00000641319 2388 ntBASIC13.49□□□□□ -0.25
SREK1IP1Q8N9Q2 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
SREK1IP1Q8N9Q2 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
SREK1IP1Q8N9Q2 LPCAT2-201ENST00000262134 5391 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SREK1IP1Q8N9Q2 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC13.49□□□□□ -0.25
SREK1IP1Q8N9Q2 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SREK1IP1Q8N9Q2 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
SREK1IP1Q8N9Q2 TSPY6P-201ENST00000448518 926 ntBASIC13.49□□□□□ -0.25
SREK1IP1Q8N9Q2 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC13.49□□□□□ -0.25
SREK1IP1Q8N9Q2 RGMA-211ENST00000557420 989 ntTSL 3 BASIC13.49□□□□□ -0.25
SREK1IP1Q8N9Q2 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SREK1IP1Q8N9Q2 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
SREK1IP1Q8N9Q2 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC13.49□□□□□ -0.25
SREK1IP1Q8N9Q2 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SREK1IP1Q8N9Q2 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
SREK1IP1Q8N9Q2 TMC5-204ENST00000541464 3581 ntTSL 2 BASIC13.49□□□□□ -0.25
SREK1IP1Q8N9Q2 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SREK1IP1Q8N9Q2 TRPM2-201ENST00000300481 5627 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SREK1IP1Q8N9Q2 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC13.49□□□□□ -0.25
SREK1IP1Q8N9Q2 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC13.49□□□□□ -0.25
SREK1IP1Q8N9Q2 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
SREK1IP1Q8N9Q2 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
SREK1IP1Q8N9Q2 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC13.49□□□□□ -0.25
SREK1IP1Q8N9Q2 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC13.49□□□□□ -0.25
SREK1IP1Q8N9Q2 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
SREK1IP1Q8N9Q2 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SREK1IP1Q8N9Q2 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SREK1IP1Q8N9Q2 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
SREK1IP1Q8N9Q2 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SREK1IP1Q8N9Q2 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SREK1IP1Q8N9Q2 PML-210ENST00000563500 4502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
SREK1IP1Q8N9Q2 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SREK1IP1Q8N9Q2 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
SREK1IP1Q8N9Q2 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC13.48□□□□□ -0.25
SREK1IP1Q8N9Q2 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
SREK1IP1Q8N9Q2 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
SREK1IP1Q8N9Q2 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
SREK1IP1Q8N9Q2 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC13.48□□□□□ -0.25
SREK1IP1Q8N9Q2 SIRPA-203ENST00000400068 4201 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
SREK1IP1Q8N9Q2 ABCA3-202ENST00000382381 6446 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SREK1IP1Q8N9Q2 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SREK1IP1Q8N9Q2 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
SREK1IP1Q8N9Q2 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SREK1IP1Q8N9Q2 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
SREK1IP1Q8N9Q2 NCF1B-203ENST00000435988 1254 ntBASIC13.48□□□□□ -0.25
SREK1IP1Q8N9Q2 KRT18P16-201ENST00000510337 1294 ntBASIC13.48□□□□□ -0.25
SREK1IP1Q8N9Q2 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC13.48□□□□□ -0.25
SREK1IP1Q8N9Q2 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SREK1IP1Q8N9Q2 TK2-208ENST00000545043 1120 ntTSL 2 BASIC13.48□□□□□ -0.25
SREK1IP1Q8N9Q2 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC13.48□□□□□ -0.25
SREK1IP1Q8N9Q2 SOX15-203ENST00000570788 1093 ntBASIC13.48□□□□□ -0.25
SREK1IP1Q8N9Q2 AC008687.6-201ENST00000596318 630 ntBASIC13.48□□□□□ -0.25
SREK1IP1Q8N9Q2 WT1-AS_3.1-201ENST00000613262 234 ntBASIC13.48□□□□□ -0.25
SREK1IP1Q8N9Q2 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
SREK1IP1Q8N9Q2 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC13.48□□□□□ -0.25
SREK1IP1Q8N9Q2 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SREK1IP1Q8N9Q2 NTRK2-203ENST00000323115 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SREK1IP1Q8N9Q2 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC13.48□□□□□ -0.25
SREK1IP1Q8N9Q2 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SREK1IP1Q8N9Q2 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
SREK1IP1Q8N9Q2 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms