RNA–Protein interactions for RNA: ENST00000529318.5

SAAL1-204, Transcript of serum amyloid A like 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SAAL1, Length 1,503 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAAL1-204ENST00000529318 NISCHQ9Y2I1 1504 aa47.12■■■■■ 5.13
SAAL1-204ENST00000529318 CCDC180Q9P1Z9 1646 aa41.77■■■■■ 4.28
SAAL1-204ENST00000529318 ABCC9O60706 1549 aa40.65■■■■■ 4.1
SAAL1-204ENST00000529318 DCAF8L2P0C7V8 631 aa39.38■■■■□ 3.89
SAAL1-204ENST00000529318 ZCCHC6Q5VYS8 1495 aaKnown RBP39.29■■■■□ 3.88
SAAL1-204ENST00000529318 NACADO15069 1562 aa39.23■■■■□ 3.87
SAAL1-204ENST00000529318 RB1CC1Q8TDY2 1594 aa39.22■■■■□ 3.87
SAAL1-204ENST00000529318 MYO15BQ96JP2 1530 aa39.06■■■■□ 3.84
SAAL1-204ENST00000529318 DCAF1Q9Y4B6 1507 aa38.99■■■■□ 3.83
SAAL1-204ENST00000529318 UNC13AQ9UPW8 1703 aa38.28■■■■□ 3.72
SAAL1-204ENST00000529318 SCRIBQ14160 1630 aa38.15■■■■□ 3.7
SAAL1-204ENST00000529318 PABPN1Q86U42 306 aaKnown RBP eCLIP38.04■■■■□ 3.68
SAAL1-204ENST00000529318 BICRAQ9NZM4 1560 aa37.96■■■■□ 3.67
SAAL1-204ENST00000529318 SHROOM4Q9ULL8 1493 aa37.63■■■■□ 3.61
SAAL1-204ENST00000529318 DNAJC5BQ9UF47 199 aa37.02■■■■□ 3.52
SAAL1-204ENST00000529318 EIF4G1Q04637 1599 aaKnown RBP36.97■■■■□ 3.51
SAAL1-204ENST00000529318 CC2D2AQ9P2K1 1620 aa36.76■■■■□ 3.48
SAAL1-204ENST00000529318 CECR2Q9BXF3 1484 aa36.66■■■■□ 3.46
SAAL1-204ENST00000529318 BAZ1AQ9NRL2 1556 aaPredicted RBP36.53■■■■□ 3.44
SAAL1-204ENST00000529318 SMARCA4P51532 1647 aa36.51■■■■□ 3.43
SAAL1-204ENST00000529318 MROH2BQ7Z745 1585 aa36.31■■■■□ 3.4
SAAL1-204ENST00000529318 SMARCA2P51531 1590 aa36.24■■■■□ 3.39
SAAL1-204ENST00000529318 ATAD2BQ9ULI0 1458 aa36.24■■■■□ 3.39
SAAL1-204ENST00000529318 NCAPD3P42695 1498 aa36.19■■■■□ 3.38
SAAL1-204ENST00000529318 PEG3Q9GZU2 1588 aa36.12■■■■□ 3.37
SAAL1-204ENST00000529318 HMGXB3Q12766 1538 aa36.03■■■■□ 3.36
SAAL1-204ENST00000529318 RSF1Q96T23 1441 aaPredicted RBP36■■■■□ 3.35
SAAL1-204ENST00000529318 BAZ1BQ9UIG0 1483 aaKnown RBP35.99■■■■□ 3.35
SAAL1-204ENST00000529318 WIZO95785 1651 aa35.94■■■■□ 3.34
SAAL1-204ENST00000529318 TOP2AP11388 1531 aaKnown RBP35.58■■■■□ 3.29
SAAL1-204ENST00000529318 SUPT5HO00267 1087 aaKnown RBP35.38■■■■□ 3.25
SAAL1-204ENST00000529318 NESP48681 1621 aa35.23■■■■□ 3.23
SAAL1-204ENST00000529318 LAMC3Q9Y6N6 1575 aa35.21■■■■□ 3.23
SAAL1-204ENST00000529318 CCDC88BA6NC98 1476 aa35.17■■■■□ 3.22
SAAL1-204ENST00000529318 CADPSQ9ULU8 1353 aa35.17■■■■□ 3.22
SAAL1-204ENST00000529318 ERCC6Q03468 1493 aa35.06■■■■□ 3.2
SAAL1-204ENST00000529318 CFTRP13569 1480 aa34.99■■■■□ 3.19
SAAL1-204ENST00000529318 PDS5BQ9NTI5 1447 aa34.99■■■■□ 3.19
SAAL1-204ENST00000529318 KIF21AQ7Z4S6 1674 aa34.82■■■■□ 3.16
SAAL1-204ENST00000529318 FANCD2Q9BXW9 1451 aa34.76■■■■□ 3.16
SAAL1-204ENST00000529318 PRDM2Q13029 1718 aa34.75■■■■□ 3.15
SAAL1-204ENST00000529318 CEP164Q9UPV0 1460 aa34.71■■■■□ 3.15
SAAL1-204ENST00000529318 THOC2Q8NI27 1593 aaKnown RBP34.61■■■■□ 3.13
SAAL1-204ENST00000529318 MRC2Q9UBG0 1479 aa34.59■■■■□ 3.13
SAAL1-204ENST00000529318 CUX2O14529 1486 aa34.55■■■■□ 3.12
SAAL1-204ENST00000529318 WDR62O43379 1518 aa34.43■■■■□ 3.1
SAAL1-204ENST00000529318 URB2Q14146 1524 aaKnown RBP34.37■■■■□ 3.09
SAAL1-204ENST00000529318 ABCC8Q09428 1581 aa34.28■■■■□ 3.08
SAAL1-204ENST00000529318 TOPBP1Q92547 1522 aa34.22■■■■□ 3.07
SAAL1-204ENST00000529318 DNMBPQ6XZF7 1577 aa34.21■■■■□ 3.07
SAAL1-204ENST00000529318 CUX1P39880 1505 aa34.05■■■■□ 3.04
SAAL1-204ENST00000529318 WRNQ14191 1432 aaPredicted RBP eCLIP33.98■■■■□ 3.03
SAAL1-204ENST00000529318 IFT140Q96RY7 1462 aa33.96■■■■□ 3.03
SAAL1-204ENST00000529318 POLA1P09884 1462 aaPredicted RBP33.95■■■■□ 3.02
SAAL1-204ENST00000529318 FGD5Q6ZNL6 1462 aa33.92■■■■□ 3.02
SAAL1-204ENST00000529318 SOGA1O94964 1423 aa33.85■■■■□ 3.01
SAAL1-204ENST00000529318 TOP2BQ02880 1626 aa33.84■■■■□ 3.01
SAAL1-204ENST00000529318 BIVM-ERCC5R4GMW8 1640 aa33.83■■■■□ 3.01
SAAL1-204ENST00000529318 SYNJ1O43426 1573 aa33.83■■■■□ 3.01
SAAL1-204ENST00000529318 TARBP1Q13395 1621 aaKnown RBP33.8■■■■□ 3
SAAL1-204ENST00000529318 RAD54L2Q9Y4B4 1467 aa33.8■■■■□ 3
SAAL1-204ENST00000529318 ZNF608Q9ULD9 1512 aaPredicted RBP33.75■■■□□ 2.99
SAAL1-204ENST00000529318 EIF4G3O43432 1585 aaKnown RBP33.64■■■□□ 2.98
SAAL1-204ENST00000529318 TDRD9Q8NDG6 1382 aaKnown RBP33.62■■■□□ 2.97
SAAL1-204ENST00000529318 AQRO60306 1485 aaKnown RBP eCLIP33.62■■■□□ 2.974e-8■■□□□ 13.7
SAAL1-204ENST00000529318 ABCA10Q8WWZ4 1543 aa33.59■■■□□ 2.97
SAAL1-204ENST00000529318 WDR97A6NE52 1622 aa33.58■■■□□ 2.97
SAAL1-204ENST00000529318 GAPVD1Q14C86 1478 aa33.46■■■□□ 2.95
SAAL1-204ENST00000529318 GRIN2BQ13224 1484 aa33.42■■■□□ 2.94
SAAL1-204ENST00000529318 TRIM41Q8WV44 630 aa33.42■■■□□ 2.94
SAAL1-204ENST00000529318 ABCA5Q8WWZ7 1642 aa33.42■■■□□ 2.94
SAAL1-204ENST00000529318 PBRM1Q86U86 1689 aa33.35■■■□□ 2.93
SAAL1-204ENST00000529318 SNAPC4Q5SXM2 1469 aa33.32■■■□□ 2.92
SAAL1-204ENST00000529318 MAGI1Q96QZ7 1491 aaPredicted RBP33.29■■■□□ 2.92
SAAL1-204ENST00000529318 KIF27Q86VH2 1401 aa33.27■■■□□ 2.92
SAAL1-204ENST00000529318 FBLN2P98095 1184 aa33.24■■■□□ 2.91
SAAL1-204ENST00000529318 OSCARQ8IYS5 282 aa33.22■■■□□ 2.91
SAAL1-204ENST00000529318 ERICH3Q5RHP9 1530 aa33.21■■■□□ 2.91
SAAL1-204ENST00000529318 CHMP7Q8WUX9 453 aaPredicted RBP33.18■■■□□ 2.9
SAAL1-204ENST00000529318 DNAJC5Q9H3Z4 198 aa33.18■■■□□ 2.9
SAAL1-204ENST00000529318 CHD1O14646 1710 aa33.17■■■□□ 2.9
SAAL1-204ENST00000529318 SYNJ2O15056 1496 aa33.16■■■□□ 2.9
SAAL1-204ENST00000529318 CHIC1Q5VXU3 224 aa33.13■■■□□ 2.89
SAAL1-204ENST00000529318 ADAMTS12P58397 1594 aa33.09■■■□□ 2.89
SAAL1-204ENST00000529318 FHAD1B1AJZ9 1412 aa33.08■■■□□ 2.89
SAAL1-204ENST00000529318 IGF1RP08069 1367 aa33.06■■■□□ 2.88
SAAL1-204ENST00000529318 RUSC2Q8N2Y8 1516 aa32.99■■■□□ 2.87
SAAL1-204ENST00000529318 GRIN2AQ12879 1464 aa32.97■■■□□ 2.87
SAAL1-204ENST00000529318 CUL7Q14999 1698 aa32.97■■■□□ 2.87
SAAL1-204ENST00000529318 CARMIL1Q5VZK9 1371 aa32.89■■■□□ 2.86
SAAL1-204ENST00000529318 EEA1Q15075 1411 aa32.81■■■□□ 2.84
SAAL1-204ENST00000529318 NUP160Q12769 1436 aa32.79■■■□□ 2.84
SAAL1-204ENST00000529318 CLASP1Q7Z460 1538 aa32.79■■■□□ 2.84
SAAL1-204ENST00000529318 CEP170Q5SW79 1584 aa32.77■■■□□ 2.84
SAAL1-204ENST00000529318 CSRNP3Q8WYN3 585 aa32.74■■■□□ 2.83
SAAL1-204ENST00000529318 RAPGEF2Q9Y4G8 1499 aa32.72■■■□□ 2.83
SAAL1-204ENST00000529318 FAM9AQ8IZU1 332 aaPredicted RBP32.71■■■□□ 2.83
SAAL1-204ENST00000529318 PRXQ9BXM0 1461 aa32.64■■■□□ 2.82
SAAL1-204ENST00000529318 ARHGEF11O15085 1522 aa32.62■■■□□ 2.81
SAAL1-204ENST00000529318 RIMBP3CA6NJZ7 1639 aa32.59■■■□□ 2.81
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms