Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14.33□□□□□ -0.12
ATF1P18846 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC14.32□□□□□ -0.12
ATF1P18846 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
ATF1P18846 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ATF1P18846 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
ATF1P18846 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
ATF1P18846 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.32□□□□□ -0.12
ATF1P18846 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
ATF1P18846 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ATF1P18846 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
ATF1P18846 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ATF1P18846 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ATF1P18846 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
ATF1P18846 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
ATF1P18846 AC020658.6-201ENST00000623564 1870 ntBASIC14.32□□□□□ -0.12
ATF1P18846 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ATF1P18846 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ATF1P18846 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
ATF1P18846 CDK2AP2P3-201ENST00000422476 372 ntBASIC14.32□□□□□ -0.12
ATF1P18846 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ATF1P18846 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC14.32□□□□□ -0.12
ATF1P18846 AC005412.3-201ENST00000580309 715 ntBASIC14.32□□□□□ -0.12
ATF1P18846 TBCB-205ENST00000585746 875 ntTSL 3 BASIC14.32□□□□□ -0.12
ATF1P18846 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ATF1P18846 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
ATF1P18846 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ATF1P18846 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ATF1P18846 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ATF1P18846 AC092919.2-201ENST00000623631 1645 ntBASIC14.32□□□□□ -0.12
ATF1P18846 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ATF1P18846 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
ATF1P18846 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ATF1P18846 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ATF1P18846 AC129492.6-201ENST00000611383 1305 ntBASIC14.32□□□□□ -0.12
ATF1P18846 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ATF1P18846 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ATF1P18846 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
ATF1P18846 AL009178.2-201ENST00000597278 2719 ntBASIC14.32□□□□□ -0.12
ATF1P18846 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ATF1P18846 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ATF1P18846 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ATF1P18846 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ATF1P18846 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
ATF1P18846 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ATF1P18846 AL109954.1-202ENST00000564051 2148 ntBASIC14.32□□□□□ -0.12
ATF1P18846 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
ATF1P18846 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC14.31□□□□□ -0.12
ATF1P18846 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ATF1P18846 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ATF1P18846 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
ATF1P18846 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ATF1P18846 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.31□□□□□ -0.12
ATF1P18846 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
ATF1P18846 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ATF1P18846 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ATF1P18846 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
ATF1P18846 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
ATF1P18846 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
ATF1P18846 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ATF1P18846 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ATF1P18846 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ATF1P18846 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC14.31□□□□□ -0.12
ATF1P18846 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ATF1P18846 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ATF1P18846 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC14.31□□□□□ -0.12
ATF1P18846 HCG4-201ENST00000418983 998 ntBASIC14.31□□□□□ -0.12
ATF1P18846 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ATF1P18846 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC14.31□□□□□ -0.12
ATF1P18846 OR7E14P-202ENST00000530490 1290 ntBASIC14.31□□□□□ -0.12
ATF1P18846 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC14.31□□□□□ -0.12
ATF1P18846 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC14.31□□□□□ -0.12
ATF1P18846 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ATF1P18846 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ATF1P18846 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ATF1P18846 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
ATF1P18846 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ATF1P18846 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC14.31□□□□□ -0.12
ATF1P18846 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC14.31□□□□□ -0.12
ATF1P18846 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
ATF1P18846 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC14.31□□□□□ -0.12
ATF1P18846 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ATF1P18846 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ATF1P18846 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.31□□□□□ -0.12
ATF1P18846 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ATF1P18846 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
ATF1P18846 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC14.31□□□□□ -0.12
ATF1P18846 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ATF1P18846 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
ATF1P18846 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ATF1P18846 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.31□□□□□ -0.12
ATF1P18846 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ATF1P18846 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ATF1P18846 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
ATF1P18846 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ATF1P18846 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
ATF1P18846 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.3□□□□□ -0.12
ATF1P18846 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC14.3□□□□□ -0.12
ATF1P18846 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ATF1P18846 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ATF1P18846 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms