Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC66A2RUB6 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC66A2RUB6 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC17.71■□□□□ 0.43
CCDC66A2RUB6 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC66A2RUB6 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC66A2RUB6 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC66A2RUB6 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CCDC66A2RUB6 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CCDC66A2RUB6 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
CCDC66A2RUB6 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC17.71■□□□□ 0.43
CCDC66A2RUB6 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC66A2RUB6 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CCDC66A2RUB6 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC17.71■□□□□ 0.43
CCDC66A2RUB6 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.71■□□□□ 0.43
CCDC66A2RUB6 AP001269.4-201ENST00000609611 512 ntBASIC17.71■□□□□ 0.43
CCDC66A2RUB6 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC66A2RUB6 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC66A2RUB6 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CCDC66A2RUB6 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC66A2RUB6 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CCDC66A2RUB6 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC17.71■□□□□ 0.43
CCDC66A2RUB6 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC66A2RUB6 AL359183.1-201ENST00000623796 2132 ntBASIC17.71■□□□□ 0.42
CCDC66A2RUB6 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CCDC66A2RUB6 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC17.71■□□□□ 0.42
CCDC66A2RUB6 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC17.7■□□□□ 0.42
CCDC66A2RUB6 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC66A2RUB6 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC17.7■□□□□ 0.42
CCDC66A2RUB6 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CCDC66A2RUB6 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC17.7■□□□□ 0.42
CCDC66A2RUB6 AC007292.2-201ENST00000593524 1812 ntBASIC17.7■□□□□ 0.42
CCDC66A2RUB6 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.7■□□□□ 0.42
CCDC66A2RUB6 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CCDC66A2RUB6 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC66A2RUB6 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC66A2RUB6 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC66A2RUB6 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC66A2RUB6 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC66A2RUB6 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC66A2RUB6 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC66A2RUB6 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC17.7■□□□□ 0.42
CCDC66A2RUB6 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC66A2RUB6 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.7■□□□□ 0.42
CCDC66A2RUB6 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC66A2RUB6 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.7■□□□□ 0.42
CCDC66A2RUB6 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC66A2RUB6 AC092119.3-201ENST00000612618 583 ntBASIC17.7■□□□□ 0.42
CCDC66A2RUB6 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC66A2RUB6 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17.7■□□□□ 0.42
CCDC66A2RUB6 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CCDC66A2RUB6 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC66A2RUB6 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC17.7■□□□□ 0.42
CCDC66A2RUB6 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC66A2RUB6 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC66A2RUB6 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC66A2RUB6 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CCDC66A2RUB6 AC015656.1-201ENST00000624209 3578 ntBASIC17.7■□□□□ 0.42
CCDC66A2RUB6 AC023157.3-201ENST00000619086 2088 ntBASIC17.7■□□□□ 0.42
CCDC66A2RUB6 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.7■□□□□ 0.42
CCDC66A2RUB6 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC66A2RUB6 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC66A2RUB6 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC17.7■□□□□ 0.42
CCDC66A2RUB6 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
CCDC66A2RUB6 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC17.7■□□□□ 0.42
CCDC66A2RUB6 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CCDC66A2RUB6 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC66A2RUB6 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC66A2RUB6 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC66A2RUB6 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
CCDC66A2RUB6 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC66A2RUB6 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC66A2RUB6 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC66A2RUB6 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC66A2RUB6 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC66A2RUB6 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC66A2RUB6 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CCDC66A2RUB6 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC17.69■□□□□ 0.42
CCDC66A2RUB6 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC66A2RUB6 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC66A2RUB6 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC66A2RUB6 AC132008.2-207ENST00000454517 770 ntBASIC17.69■□□□□ 0.42
CCDC66A2RUB6 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC66A2RUB6 AC106795.1-205ENST00000512851 1056 ntBASIC17.69■□□□□ 0.42
CCDC66A2RUB6 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.69■□□□□ 0.42
CCDC66A2RUB6 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC66A2RUB6 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.69■□□□□ 0.42
CCDC66A2RUB6 AL022326.1-202ENST00000641533 845 ntBASIC17.69■□□□□ 0.42
CCDC66A2RUB6 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CCDC66A2RUB6 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC66A2RUB6 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC17.69■□□□□ 0.42
CCDC66A2RUB6 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC17.69■□□□□ 0.42
CCDC66A2RUB6 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.69■□□□□ 0.42
CCDC66A2RUB6 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC17.69■□□□□ 0.42
CCDC66A2RUB6 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.69■□□□□ 0.42
CCDC66A2RUB6 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC66A2RUB6 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC17.68■□□□□ 0.42
CCDC66A2RUB6 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC66A2RUB6 TOP3BP1-201ENST00000420768 1380 ntBASIC17.68■□□□□ 0.42
CCDC66A2RUB6 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
CCDC66A2RUB6 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms