Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC15.62■□□□□ 0.09
RAB43Q86YS6 BAD-207ENST00000544785 525 ntTSL 3 BASIC15.62■□□□□ 0.09
RAB43Q86YS6 DUX4L27-201ENST00000554796 1261 ntBASIC15.62■□□□□ 0.09
RAB43Q86YS6 AC026150.2-201ENST00000564693 1156 ntBASIC15.62■□□□□ 0.09
RAB43Q86YS6 AC051619.7-201ENST00000568314 623 ntBASIC15.62■□□□□ 0.09
RAB43Q86YS6 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC15.62■□□□□ 0.09
RAB43Q86YS6 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC15.62■□□□□ 0.09
RAB43Q86YS6 CYP2A7P1-201ENST00000595391 815 ntBASIC15.62■□□□□ 0.09
RAB43Q86YS6 MIR6080-201ENST00000617359 66 ntBASIC15.62■□□□□ 0.09
RAB43Q86YS6 AC084121.4-201ENST00000641598 221 ntBASIC15.62■□□□□ 0.09
RAB43Q86YS6 AF228730.8-201ENST00000642140 221 ntBASIC15.62■□□□□ 0.09
RAB43Q86YS6 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC15.62■□□□□ 0.09
RAB43Q86YS6 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RAB43Q86YS6 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
RAB43Q86YS6 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RAB43Q86YS6 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RAB43Q86YS6 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
RAB43Q86YS6 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
RAB43Q86YS6 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
RAB43Q86YS6 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RAB43Q86YS6 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC15.62■□□□□ 0.09
RAB43Q86YS6 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
RAB43Q86YS6 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RAB43Q86YS6 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RAB43Q86YS6 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC15.62■□□□□ 0.09
RAB43Q86YS6 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RAB43Q86YS6 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC15.62■□□□□ 0.09
RAB43Q86YS6 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RAB43Q86YS6 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RAB43Q86YS6 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RAB43Q86YS6 AC023824.1-201ENST00000562945 2975 ntBASIC15.61■□□□□ 0.09
RAB43Q86YS6 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RAB43Q86YS6 AC016027.1-202ENST00000607927 1699 ntBASIC15.61■□□□□ 0.09
RAB43Q86YS6 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
RAB43Q86YS6 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
RAB43Q86YS6 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC15.61■□□□□ 0.09
RAB43Q86YS6 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RAB43Q86YS6 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RAB43Q86YS6 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RAB43Q86YS6 MIR943-201ENST00000401286 94 ntBASIC15.61■□□□□ 0.09
RAB43Q86YS6 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC15.61■□□□□ 0.09
RAB43Q86YS6 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RAB43Q86YS6 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
RAB43Q86YS6 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RAB43Q86YS6 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
RAB43Q86YS6 SLC25A39P2-201ENST00000537614 270 ntBASIC15.61■□□□□ 0.09
RAB43Q86YS6 AQP6-203ENST00000551733 849 ntTSL 3 BASIC15.61■□□□□ 0.09
RAB43Q86YS6 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC15.61■□□□□ 0.09
RAB43Q86YS6 AJ011932.1-201ENST00000621707 465 ntBASIC15.61■□□□□ 0.09
RAB43Q86YS6 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RAB43Q86YS6 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RAB43Q86YS6 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.61■□□□□ 0.09
RAB43Q86YS6 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RAB43Q86YS6 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
RAB43Q86YS6 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC15.61■□□□□ 0.09
RAB43Q86YS6 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC15.61■□□□□ 0.09
RAB43Q86YS6 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
RAB43Q86YS6 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
RAB43Q86YS6 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RAB43Q86YS6 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.6■□□□□ 0.09
RAB43Q86YS6 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
RAB43Q86YS6 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RAB43Q86YS6 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC15.6■□□□□ 0.09
RAB43Q86YS6 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RAB43Q86YS6 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RAB43Q86YS6 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
RAB43Q86YS6 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
RAB43Q86YS6 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC15.6■□□□□ 0.09
RAB43Q86YS6 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC15.6■□□□□ 0.09
RAB43Q86YS6 SLC9A3P2-201ENST00000447821 2021 ntBASIC15.6■□□□□ 0.09
RAB43Q86YS6 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
RAB43Q86YS6 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RAB43Q86YS6 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.6■□□□□ 0.09
RAB43Q86YS6 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
RAB43Q86YS6 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
RAB43Q86YS6 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
RAB43Q86YS6 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RAB43Q86YS6 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.6■□□□□ 0.09
RAB43Q86YS6 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
RAB43Q86YS6 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RAB43Q86YS6 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RAB43Q86YS6 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
RAB43Q86YS6 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
RAB43Q86YS6 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC15.6■□□□□ 0.09
RAB43Q86YS6 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC15.6■□□□□ 0.09
RAB43Q86YS6 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
RAB43Q86YS6 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC15.6■□□□□ 0.09
RAB43Q86YS6 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC15.6■□□□□ 0.09
RAB43Q86YS6 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC15.6■□□□□ 0.09
RAB43Q86YS6 KRT18P34-201ENST00000488218 1270 ntBASIC15.6■□□□□ 0.09
RAB43Q86YS6 INGX-202ENST00000489074 768 ntBASIC15.6■□□□□ 0.09
RAB43Q86YS6 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RAB43Q86YS6 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC15.6■□□□□ 0.09
RAB43Q86YS6 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC15.6■□□□□ 0.09
RAB43Q86YS6 AC140878.1-201ENST00000565277 250 ntBASIC15.6■□□□□ 0.09
RAB43Q86YS6 AP000842.3-202ENST00000569238 1080 ntBASIC15.6■□□□□ 0.09
RAB43Q86YS6 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC15.6■□□□□ 0.09
RAB43Q86YS6 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC15.6■□□□□ 0.09
RAB43Q86YS6 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
RAB43Q86YS6 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms