Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC15.15■□□□□ 0.02
PER3P56645 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15.15■□□□□ 0.02
PER3P56645 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
PER3P56645 LINC02228-204ENST00000642115 2962 ntBASIC15.15■□□□□ 0.02
PER3P56645 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC15.15■□□□□ 0.02
PER3P56645 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PER3P56645 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PER3P56645 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PER3P56645 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
PER3P56645 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PER3P56645 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
PER3P56645 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC15.15■□□□□ 0.02
PER3P56645 FO538757.1-201ENST00000623083 1397 ntBASIC15.15■□□□□ 0.02
PER3P56645 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
PER3P56645 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PER3P56645 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
PER3P56645 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PER3P56645 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC15.15■□□□□ 0.02
PER3P56645 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
PER3P56645 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
PER3P56645 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC15.15■□□□□ 0.02
PER3P56645 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
PER3P56645 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC15.15■□□□□ 0.02
PER3P56645 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC15.15■□□□□ 0.02
PER3P56645 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC15.15■□□□□ 0.02
PER3P56645 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PER3P56645 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC15.15■□□□□ 0.02
PER3P56645 CR383656.12-201ENST00000549567 513 ntBASIC15.15■□□□□ 0.02
PER3P56645 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC15.15■□□□□ 0.02
PER3P56645 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PER3P56645 AL359881.2-201ENST00000602973 570 ntBASIC15.15■□□□□ 0.02
PER3P56645 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC15.15■□□□□ 0.02
PER3P56645 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC15.15■□□□□ 0.02
PER3P56645 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PER3P56645 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC15.15■□□□□ 0.02
PER3P56645 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC15.15■□□□□ 0.02
PER3P56645 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
PER3P56645 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PER3P56645 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC15.15■□□□□ 0.02
PER3P56645 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
PER3P56645 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
PER3P56645 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PER3P56645 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PER3P56645 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
PER3P56645 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC15.15■□□□□ 0.02
PER3P56645 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC15.15■□□□□ 0.02
PER3P56645 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PER3P56645 CYP51A1P2-201ENST00000419457 1499 ntBASIC15.14■□□□□ 0.01
PER3P56645 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PER3P56645 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PER3P56645 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
PER3P56645 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PER3P56645 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC15.14■□□□□ 0.01
PER3P56645 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
PER3P56645 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PER3P56645 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC15.14■□□□□ 0.01
PER3P56645 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
PER3P56645 UXT-AS1-201ENST00000590504 1525 ntBASIC15.14■□□□□ 0.01
PER3P56645 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC15.14■□□□□ 0.01
PER3P56645 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PER3P56645 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PER3P56645 GRAP-202ENST00000395635 834 ntTSL 2 BASIC15.14■□□□□ 0.01
PER3P56645 WRB-204ENST00000398753 699 ntTSL 3 BASIC15.14■□□□□ 0.01
PER3P56645 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PER3P56645 TREML5P-201ENST00000421694 576 ntBASIC15.14■□□□□ 0.01
PER3P56645 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC15.14■□□□□ 0.01
PER3P56645 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC15.14■□□□□ 0.01
PER3P56645 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC15.14■□□□□ 0.01
PER3P56645 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC15.14■□□□□ 0.01
PER3P56645 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC15.14■□□□□ 0.01
PER3P56645 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC15.14■□□□□ 0.01
PER3P56645 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
PER3P56645 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
PER3P56645 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC15.14■□□□□ 0.01
PER3P56645 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PER3P56645 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PER3P56645 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
PER3P56645 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
PER3P56645 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.14■□□□□ 0.01
PER3P56645 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC15.14■□□□□ 0.01
PER3P56645 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
PER3P56645 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
PER3P56645 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
PER3P56645 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.14■□□□□ 0.01
PER3P56645 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PER3P56645 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PER3P56645 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
PER3P56645 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PER3P56645 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC15.13■□□□□ 0.01
PER3P56645 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
PER3P56645 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PER3P56645 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PER3P56645 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PER3P56645 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PER3P56645 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
PER3P56645 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
PER3P56645 HNRNPRP1-201ENST00000453465 1695 ntBASIC15.13■□□□□ 0.01
PER3P56645 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
PER3P56645 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
PER3P56645 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms