Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC14.49□□□□□ -0.09
HOXC12P31275 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HOXC12P31275 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
HOXC12P31275 AMT-206ENST00000458307 1860 ntTSL 2 BASIC14.48□□□□□ -0.09
HOXC12P31275 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HOXC12P31275 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
HOXC12P31275 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC14.48□□□□□ -0.09
HOXC12P31275 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC14.48□□□□□ -0.09
HOXC12P31275 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
HOXC12P31275 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
HOXC12P31275 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HOXC12P31275 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HOXC12P31275 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
HOXC12P31275 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC14.48□□□□□ -0.09
HOXC12P31275 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC14.48□□□□□ -0.09
HOXC12P31275 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC14.48□□□□□ -0.09
HOXC12P31275 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
HOXC12P31275 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
HOXC12P31275 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC14.48□□□□□ -0.09
HOXC12P31275 KLF2P3-201ENST00000451977 1087 ntBASIC14.48□□□□□ -0.09
HOXC12P31275 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC14.48□□□□□ -0.09
HOXC12P31275 PRYP6-201ENST00000514804 343 ntBASIC14.48□□□□□ -0.09
HOXC12P31275 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC14.48□□□□□ -0.09
HOXC12P31275 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC14.48□□□□□ -0.09
HOXC12P31275 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC14.48□□□□□ -0.09
HOXC12P31275 AP001059.3-201ENST00000619053 235 ntBASIC14.48□□□□□ -0.09
HOXC12P31275 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HOXC12P31275 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HOXC12P31275 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC14.48□□□□□ -0.09
HOXC12P31275 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
HOXC12P31275 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC14.48□□□□□ -0.09
HOXC12P31275 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HOXC12P31275 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
HOXC12P31275 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC14.48□□□□□ -0.09
HOXC12P31275 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HOXC12P31275 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
HOXC12P31275 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HOXC12P31275 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
HOXC12P31275 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
HOXC12P31275 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
HOXC12P31275 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
HOXC12P31275 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HOXC12P31275 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HOXC12P31275 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HOXC12P31275 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HOXC12P31275 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HOXC12P31275 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HOXC12P31275 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC14.47□□□□□ -0.09
HOXC12P31275 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HOXC12P31275 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HOXC12P31275 NARF-206ENST00000457415 1668 ntTSL 5 BASIC14.47□□□□□ -0.09
HOXC12P31275 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HOXC12P31275 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC14.47□□□□□ -0.09
HOXC12P31275 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HOXC12P31275 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HOXC12P31275 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HOXC12P31275 RPL30-202ENST00000396070 440 ntTSL 2 BASIC14.47□□□□□ -0.09
HOXC12P31275 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC14.47□□□□□ -0.09
HOXC12P31275 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC14.47□□□□□ -0.09
HOXC12P31275 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC14.47□□□□□ -0.09
HOXC12P31275 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC14.47□□□□□ -0.09
HOXC12P31275 AC105233.2-201ENST00000523697 349 ntBASIC14.47□□□□□ -0.09
HOXC12P31275 AF228730.5-201ENST00000530288 346 ntBASIC14.47□□□□□ -0.09
HOXC12P31275 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC14.47□□□□□ -0.09
HOXC12P31275 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC14.47□□□□□ -0.09
HOXC12P31275 AC008761.3-201ENST00000624803 892 ntBASIC14.47□□□□□ -0.09
HOXC12P31275 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC14.47□□□□□ -0.09
HOXC12P31275 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HOXC12P31275 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HOXC12P31275 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC14.47□□□□□ -0.09
HOXC12P31275 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
HOXC12P31275 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HOXC12P31275 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HOXC12P31275 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
HOXC12P31275 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HOXC12P31275 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
HOXC12P31275 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC14.47□□□□□ -0.09
HOXC12P31275 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
HOXC12P31275 GPAA1P2-202ENST00000606848 1787 ntBASIC14.47□□□□□ -0.09
HOXC12P31275 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
HOXC12P31275 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
HOXC12P31275 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
HOXC12P31275 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HOXC12P31275 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC14.47□□□□□ -0.09
HOXC12P31275 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
HOXC12P31275 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC14.46□□□□□ -0.09
HOXC12P31275 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
HOXC12P31275 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC14.46□□□□□ -0.09
HOXC12P31275 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HOXC12P31275 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
HOXC12P31275 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
HOXC12P31275 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HOXC12P31275 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
HOXC12P31275 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
HOXC12P31275 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.46□□□□□ -0.09
HOXC12P31275 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HOXC12P31275 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
HOXC12P31275 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
HOXC12P31275 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC14.46□□□□□ -0.09
HOXC12P31275 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms