Protein–RNA interactions for Protein: P02656

APOC3, Apolipoprotein C-III, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3P02656 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
APOC3P02656 SERPINH1P1-201ENST00000419794 1249 ntBASIC13.09□□□□□ -0.31
APOC3P02656 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC13.09□□□□□ -0.31
APOC3P02656 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC13.09□□□□□ -0.31
APOC3P02656 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC13.09□□□□□ -0.31
APOC3P02656 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC13.09□□□□□ -0.31
APOC3P02656 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC13.09□□□□□ -0.31
APOC3P02656 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
APOC3P02656 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC13.09□□□□□ -0.31
APOC3P02656 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
APOC3P02656 AC069544.1-201ENST00000609399 999 ntBASIC13.09□□□□□ -0.31
APOC3P02656 AC120498.8-201ENST00000614275 531 ntBASIC13.09□□□□□ -0.31
APOC3P02656 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC13.09□□□□□ -0.31
APOC3P02656 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC13.09□□□□□ -0.31
APOC3P02656 HSPA7-201ENST00000445535 1927 ntBASIC13.09□□□□□ -0.31
APOC3P02656 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
APOC3P02656 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
APOC3P02656 PC-208ENST00000529047 1607 ntTSL 3 BASIC13.09□□□□□ -0.31
APOC3P02656 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC13.09□□□□□ -0.31
APOC3P02656 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
APOC3P02656 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
APOC3P02656 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
APOC3P02656 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC13.09□□□□□ -0.31
APOC3P02656 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
APOC3P02656 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
APOC3P02656 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
APOC3P02656 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
APOC3P02656 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
APOC3P02656 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
APOC3P02656 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.31
APOC3P02656 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
APOC3P02656 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
APOC3P02656 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC13.08□□□□□ -0.31
APOC3P02656 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC13.08□□□□□ -0.31
APOC3P02656 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
APOC3P02656 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
APOC3P02656 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
APOC3P02656 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
APOC3P02656 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
APOC3P02656 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC13.08□□□□□ -0.32
APOC3P02656 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
APOC3P02656 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC13.08□□□□□ -0.32
APOC3P02656 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
APOC3P02656 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC13.08□□□□□ -0.32
APOC3P02656 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
APOC3P02656 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
APOC3P02656 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
APOC3P02656 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
APOC3P02656 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
APOC3P02656 AC073869.1-201ENST00000415574 2762 ntBASIC13.08□□□□□ -0.32
APOC3P02656 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
APOC3P02656 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
APOC3P02656 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
APOC3P02656 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
APOC3P02656 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
APOC3P02656 NME6-213ENST00000451657 871 ntTSL 2 BASIC13.08□□□□□ -0.32
APOC3P02656 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC13.08□□□□□ -0.32
APOC3P02656 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC13.08□□□□□ -0.32
APOC3P02656 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
APOC3P02656 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC13.08□□□□□ -0.32
APOC3P02656 SPI1-203ENST00000533030 661 ntTSL 2 BASIC13.08□□□□□ -0.32
APOC3P02656 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
APOC3P02656 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
APOC3P02656 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC13.08□□□□□ -0.32
APOC3P02656 KRT18P61-201ENST00000585825 1298 ntBASIC13.08□□□□□ -0.32
APOC3P02656 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
APOC3P02656 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC13.08□□□□□ -0.32
APOC3P02656 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
APOC3P02656 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC13.08□□□□□ -0.32
APOC3P02656 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
APOC3P02656 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
APOC3P02656 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
APOC3P02656 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
APOC3P02656 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
APOC3P02656 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
APOC3P02656 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC13.08□□□□□ -0.32
APOC3P02656 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
APOC3P02656 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC13.08□□□□□ -0.32
APOC3P02656 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
APOC3P02656 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
APOC3P02656 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
APOC3P02656 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC13.08□□□□□ -0.32
APOC3P02656 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
APOC3P02656 TBR1-201ENST00000389554 4009 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
APOC3P02656 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
APOC3P02656 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
APOC3P02656 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
APOC3P02656 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
APOC3P02656 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
APOC3P02656 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
APOC3P02656 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
APOC3P02656 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC13.07□□□□□ -0.32
APOC3P02656 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC13.07□□□□□ -0.32
APOC3P02656 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
APOC3P02656 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
APOC3P02656 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC13.07□□□□□ -0.32
APOC3P02656 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC13.07□□□□□ -0.32
APOC3P02656 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
APOC3P02656 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC13.07□□□□□ -0.32
APOC3P02656 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms