Protein–RNA interactions for Protein: P18564

ITGB6, Integrin beta-6, humanhuman

Predictions only

Length 788 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB6P18564 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ITGB6P18564 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.31■□□□□ 0.2
ITGB6P18564 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.31■□□□□ 0.2
ITGB6P18564 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ITGB6P18564 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.31■□□□□ 0.2
ITGB6P18564 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ITGB6P18564 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ITGB6P18564 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ITGB6P18564 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ITGB6P18564 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.31■□□□□ 0.2
ITGB6P18564 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ITGB6P18564 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
ITGB6P18564 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ITGB6P18564 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
ITGB6P18564 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ITGB6P18564 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ITGB6P18564 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
ITGB6P18564 PTMS-202ENST00000389462 773 ntTSL 2 BASIC16.31■□□□□ 0.2
ITGB6P18564 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.31■□□□□ 0.2
ITGB6P18564 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.31■□□□□ 0.2
ITGB6P18564 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC16.31■□□□□ 0.2
ITGB6P18564 AC092474.2-201ENST00000424288 719 ntBASIC16.31■□□□□ 0.2
ITGB6P18564 FAM58CP-201ENST00000435741 640 ntBASIC16.31■□□□□ 0.2
ITGB6P18564 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC16.31■□□□□ 0.2
ITGB6P18564 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ITGB6P18564 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC16.31■□□□□ 0.2
ITGB6P18564 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
ITGB6P18564 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC16.31■□□□□ 0.2
ITGB6P18564 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC16.31■□□□□ 0.2
ITGB6P18564 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.31■□□□□ 0.2
ITGB6P18564 AC020765.3-201ENST00000613051 740 ntBASIC16.31■□□□□ 0.2
ITGB6P18564 AC091812.2-201ENST00000619081 385 ntBASIC16.31■□□□□ 0.2
ITGB6P18564 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC16.31■□□□□ 0.2
ITGB6P18564 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.31■□□□□ 0.2
ITGB6P18564 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
ITGB6P18564 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
ITGB6P18564 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.31■□□□□ 0.2
ITGB6P18564 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC16.31■□□□□ 0.2
ITGB6P18564 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ITGB6P18564 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
ITGB6P18564 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ITGB6P18564 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
ITGB6P18564 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
ITGB6P18564 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
ITGB6P18564 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
ITGB6P18564 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
ITGB6P18564 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ITGB6P18564 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.3■□□□□ 0.2
ITGB6P18564 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.3■□□□□ 0.2
ITGB6P18564 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.3■□□□□ 0.2
ITGB6P18564 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ITGB6P18564 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ITGB6P18564 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ITGB6P18564 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.3■□□□□ 0.2
ITGB6P18564 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ITGB6P18564 AL139400.1-201ENST00000366220 510 ntBASIC16.3■□□□□ 0.2
ITGB6P18564 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ITGB6P18564 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ITGB6P18564 PNKD-204ENST00000436005 978 ntTSL 5 BASIC16.3■□□□□ 0.2
ITGB6P18564 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC16.3■□□□□ 0.2
ITGB6P18564 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ITGB6P18564 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ITGB6P18564 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC16.3■□□□□ 0.2
ITGB6P18564 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
ITGB6P18564 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
ITGB6P18564 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16.3■□□□□ 0.2
ITGB6P18564 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
ITGB6P18564 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ITGB6P18564 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
ITGB6P18564 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.3■□□□□ 0.2
ITGB6P18564 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
ITGB6P18564 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ITGB6P18564 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.3■□□□□ 0.2
ITGB6P18564 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC16.3■□□□□ 0.2
ITGB6P18564 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.3■□□□□ 0.2
ITGB6P18564 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ITGB6P18564 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.3■□□□□ 0.2
ITGB6P18564 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ITGB6P18564 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.3■□□□□ 0.2
ITGB6P18564 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ITGB6P18564 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ITGB6P18564 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
ITGB6P18564 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.29■□□□□ 0.2
ITGB6P18564 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ITGB6P18564 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ITGB6P18564 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
ITGB6P18564 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.29■□□□□ 0.2
ITGB6P18564 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
ITGB6P18564 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ITGB6P18564 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ITGB6P18564 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ITGB6P18564 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ITGB6P18564 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.29■□□□□ 0.2
ITGB6P18564 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
ITGB6P18564 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC16.29■□□□□ 0.2
ITGB6P18564 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
ITGB6P18564 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ITGB6P18564 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.29■□□□□ 0.2
ITGB6P18564 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC16.29■□□□□ 0.2
ITGB6P18564 LINC01144-201ENST00000626198 1710 ntBASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms