Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SNED1Q8TER0 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SNED1Q8TER0 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC19.55■□□□□ 0.72
SNED1Q8TER0 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SNED1Q8TER0 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SNED1Q8TER0 AC004987.2-201ENST00000395959 1148 ntBASIC19.55■□□□□ 0.72
SNED1Q8TER0 AC012441.1-201ENST00000446669 685 ntBASIC19.55■□□□□ 0.72
SNED1Q8TER0 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC19.55■□□□□ 0.72
SNED1Q8TER0 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SNED1Q8TER0 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SNED1Q8TER0 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC19.55■□□□□ 0.72
SNED1Q8TER0 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC19.55■□□□□ 0.72
SNED1Q8TER0 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC19.55■□□□□ 0.72
SNED1Q8TER0 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC19.55■□□□□ 0.72
SNED1Q8TER0 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
SNED1Q8TER0 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC19.55■□□□□ 0.72
SNED1Q8TER0 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC19.55■□□□□ 0.72
SNED1Q8TER0 KRT8P37-201ENST00000451609 1420 ntBASIC19.55■□□□□ 0.72
SNED1Q8TER0 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SNED1Q8TER0 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
SNED1Q8TER0 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SNED1Q8TER0 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SNED1Q8TER0 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SNED1Q8TER0 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SNED1Q8TER0 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC19.54■□□□□ 0.72
SNED1Q8TER0 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC19.54■□□□□ 0.72
SNED1Q8TER0 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
SNED1Q8TER0 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SNED1Q8TER0 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SNED1Q8TER0 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SNED1Q8TER0 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC19.54■□□□□ 0.72
SNED1Q8TER0 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC19.54■□□□□ 0.72
SNED1Q8TER0 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SNED1Q8TER0 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SNED1Q8TER0 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
SNED1Q8TER0 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC19.54■□□□□ 0.72
SNED1Q8TER0 GOLGA2P4-201ENST00000441462 777 ntBASIC19.54■□□□□ 0.72
SNED1Q8TER0 RIT1-205ENST00000539040 919 ntTSL 2 BASIC19.54■□□□□ 0.72
SNED1Q8TER0 ENPP7P5-201ENST00000541031 1031 ntBASIC19.54■□□□□ 0.72
SNED1Q8TER0 PTP4A1P2-201ENST00000546033 454 ntBASIC19.54■□□□□ 0.72
SNED1Q8TER0 AC103810.3-201ENST00000583567 96 ntBASIC19.54■□□□□ 0.72
SNED1Q8TER0 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC19.54■□□□□ 0.72
SNED1Q8TER0 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
SNED1Q8TER0 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SNED1Q8TER0 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SNED1Q8TER0 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
SNED1Q8TER0 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC19.54■□□□□ 0.72
SNED1Q8TER0 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC19.54■□□□□ 0.72
SNED1Q8TER0 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
SNED1Q8TER0 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SNED1Q8TER0 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SNED1Q8TER0 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SNED1Q8TER0 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SNED1Q8TER0 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC19.54■□□□□ 0.72
SNED1Q8TER0 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SNED1Q8TER0 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SNED1Q8TER0 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SNED1Q8TER0 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC19.53■□□□□ 0.72
SNED1Q8TER0 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC19.53■□□□□ 0.72
SNED1Q8TER0 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SNED1Q8TER0 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC19.53■□□□□ 0.72
SNED1Q8TER0 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SNED1Q8TER0 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SNED1Q8TER0 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SNED1Q8TER0 GPAA1P2-201ENST00000417923 928 ntBASIC19.53■□□□□ 0.72
SNED1Q8TER0 AC026954.1-201ENST00000429771 1293 ntBASIC19.53■□□□□ 0.72
SNED1Q8TER0 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SNED1Q8TER0 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC19.53■□□□□ 0.72
SNED1Q8TER0 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC19.53■□□□□ 0.72
SNED1Q8TER0 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC19.53■□□□□ 0.72
SNED1Q8TER0 FAM86HP-204ENST00000513466 959 ntBASIC19.53■□□□□ 0.72
SNED1Q8TER0 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC19.53■□□□□ 0.72
SNED1Q8TER0 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC19.53■□□□□ 0.72
SNED1Q8TER0 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC19.53■□□□□ 0.72
SNED1Q8TER0 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC19.53■□□□□ 0.72
SNED1Q8TER0 AL049840.4-201ENST00000602422 811 ntBASIC19.53■□□□□ 0.72
SNED1Q8TER0 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC19.53■□□□□ 0.72
SNED1Q8TER0 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC19.53■□□□□ 0.72
SNED1Q8TER0 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC19.53■□□□□ 0.72
SNED1Q8TER0 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SNED1Q8TER0 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SNED1Q8TER0 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SNED1Q8TER0 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC19.53■□□□□ 0.72
SNED1Q8TER0 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC19.53■□□□□ 0.72
SNED1Q8TER0 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SNED1Q8TER0 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC19.53■□□□□ 0.72
SNED1Q8TER0 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
SNED1Q8TER0 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SNED1Q8TER0 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SNED1Q8TER0 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SNED1Q8TER0 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC19.53■□□□□ 0.72
SNED1Q8TER0 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC19.53■□□□□ 0.72
SNED1Q8TER0 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC19.53■□□□□ 0.72
SNED1Q8TER0 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SNED1Q8TER0 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SNED1Q8TER0 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
SNED1Q8TER0 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
SNED1Q8TER0 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC19.52■□□□□ 0.72
SNED1Q8TER0 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
SNED1Q8TER0 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms