Protein–RNA interactions for Protein: O43761

SYNGR3, Synaptogyrin-3, humanhuman

Predictions only

Length 229 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3O43761 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC14.25□□□□□ -0.13
SYNGR3O43761 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
SYNGR3O43761 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SYNGR3O43761 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SYNGR3O43761 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SYNGR3O43761 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SYNGR3O43761 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SYNGR3O43761 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
SYNGR3O43761 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC14.24□□□□□ -0.13
SYNGR3O43761 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC14.24□□□□□ -0.13
SYNGR3O43761 AC022188.1-201ENST00000620960 1664 ntBASIC14.24□□□□□ -0.13
SYNGR3O43761 KRT18P28-201ENST00000453838 1332 ntBASIC14.24□□□□□ -0.13
SYNGR3O43761 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SYNGR3O43761 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.24□□□□□ -0.13
SYNGR3O43761 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SYNGR3O43761 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SYNGR3O43761 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SYNGR3O43761 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SYNGR3O43761 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC14.24□□□□□ -0.13
SYNGR3O43761 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SYNGR3O43761 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SYNGR3O43761 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
SYNGR3O43761 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SYNGR3O43761 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC14.24□□□□□ -0.13
SYNGR3O43761 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC14.24□□□□□ -0.13
SYNGR3O43761 LBH-203ENST00000404397 543 ntTSL 4 BASIC14.24□□□□□ -0.13
SYNGR3O43761 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC14.24□□□□□ -0.13
SYNGR3O43761 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC14.24□□□□□ -0.13
SYNGR3O43761 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SYNGR3O43761 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC14.24□□□□□ -0.13
SYNGR3O43761 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC14.24□□□□□ -0.13
SYNGR3O43761 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
SYNGR3O43761 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC14.24□□□□□ -0.13
SYNGR3O43761 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
SYNGR3O43761 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
SYNGR3O43761 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC14.24□□□□□ -0.13
SYNGR3O43761 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SYNGR3O43761 AL365330.1-201ENST00000607459 531 ntBASIC14.24□□□□□ -0.13
SYNGR3O43761 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC14.24□□□□□ -0.13
SYNGR3O43761 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SYNGR3O43761 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC14.24□□□□□ -0.13
SYNGR3O43761 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SYNGR3O43761 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SYNGR3O43761 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
SYNGR3O43761 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC14.24□□□□□ -0.13
SYNGR3O43761 AL365203.3-201ENST00000609742 2057 ntBASIC14.24□□□□□ -0.13
SYNGR3O43761 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SYNGR3O43761 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
SYNGR3O43761 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC14.23□□□□□ -0.13
SYNGR3O43761 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
SYNGR3O43761 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SYNGR3O43761 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC14.23□□□□□ -0.13
SYNGR3O43761 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC14.23□□□□□ -0.13
SYNGR3O43761 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14.23□□□□□ -0.13
SYNGR3O43761 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.23□□□□□ -0.13
SYNGR3O43761 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SYNGR3O43761 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SYNGR3O43761 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
SYNGR3O43761 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SYNGR3O43761 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC14.23□□□□□ -0.13
SYNGR3O43761 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SYNGR3O43761 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SYNGR3O43761 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
SYNGR3O43761 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC14.23□□□□□ -0.13
SYNGR3O43761 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
SYNGR3O43761 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SYNGR3O43761 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
SYNGR3O43761 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SYNGR3O43761 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC14.23□□□□□ -0.13
SYNGR3O43761 GGCT-205ENST00000409436 954 ntTSL 3 BASIC14.23□□□□□ -0.13
SYNGR3O43761 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC14.23□□□□□ -0.13
SYNGR3O43761 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC14.23□□□□□ -0.13
SYNGR3O43761 AL138918.1-201ENST00000568306 659 ntBASIC14.23□□□□□ -0.13
SYNGR3O43761 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC14.23□□□□□ -0.13
SYNGR3O43761 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC14.23□□□□□ -0.13
SYNGR3O43761 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
SYNGR3O43761 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SYNGR3O43761 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
SYNGR3O43761 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
SYNGR3O43761 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
SYNGR3O43761 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SYNGR3O43761 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SYNGR3O43761 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC14.23□□□□□ -0.13
SYNGR3O43761 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14.23□□□□□ -0.13
SYNGR3O43761 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
SYNGR3O43761 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SYNGR3O43761 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SYNGR3O43761 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
SYNGR3O43761 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14.23□□□□□ -0.13
SYNGR3O43761 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SYNGR3O43761 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SYNGR3O43761 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SYNGR3O43761 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
SYNGR3O43761 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SYNGR3O43761 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
SYNGR3O43761 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
SYNGR3O43761 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SYNGR3O43761 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC14.22□□□□□ -0.13
SYNGR3O43761 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SYNGR3O43761 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms