Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
SYNPO2Q9UMS6 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SYNPO2Q9UMS6 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
SYNPO2Q9UMS6 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SYNPO2Q9UMS6 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SYNPO2Q9UMS6 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
SYNPO2Q9UMS6 AC009053.2-201ENST00000563701 2365 ntBASIC18.62■□□□□ 0.57
SYNPO2Q9UMS6 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SYNPO2Q9UMS6 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
SYNPO2Q9UMS6 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC18.62■□□□□ 0.57
SYNPO2Q9UMS6 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
SYNPO2Q9UMS6 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
SYNPO2Q9UMS6 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SYNPO2Q9UMS6 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC18.62■□□□□ 0.57
SYNPO2Q9UMS6 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC18.62■□□□□ 0.57
SYNPO2Q9UMS6 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC18.62■□□□□ 0.57
SYNPO2Q9UMS6 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC18.62■□□□□ 0.57
SYNPO2Q9UMS6 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SYNPO2Q9UMS6 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
SYNPO2Q9UMS6 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC18.62■□□□□ 0.57
SYNPO2Q9UMS6 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC18.62■□□□□ 0.57
SYNPO2Q9UMS6 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC18.62■□□□□ 0.57
SYNPO2Q9UMS6 AL391069.4-201ENST00000609583 481 ntBASIC18.62■□□□□ 0.57
SYNPO2Q9UMS6 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SYNPO2Q9UMS6 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SYNPO2Q9UMS6 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SYNPO2Q9UMS6 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SYNPO2Q9UMS6 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC18.62■□□□□ 0.57
SYNPO2Q9UMS6 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SYNPO2Q9UMS6 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
SYNPO2Q9UMS6 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SYNPO2Q9UMS6 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
SYNPO2Q9UMS6 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
SYNPO2Q9UMS6 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC18.62■□□□□ 0.57
SYNPO2Q9UMS6 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC18.62■□□□□ 0.57
SYNPO2Q9UMS6 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SYNPO2Q9UMS6 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SYNPO2Q9UMS6 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SYNPO2Q9UMS6 HTR7P1-202ENST00000624664 4411 ntBASIC18.61■□□□□ 0.57
SYNPO2Q9UMS6 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.61■□□□□ 0.57
SYNPO2Q9UMS6 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SYNPO2Q9UMS6 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
SYNPO2Q9UMS6 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SYNPO2Q9UMS6 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SYNPO2Q9UMS6 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SYNPO2Q9UMS6 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SYNPO2Q9UMS6 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC18.61■□□□□ 0.57
SYNPO2Q9UMS6 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC18.61■□□□□ 0.57
SYNPO2Q9UMS6 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SYNPO2Q9UMS6 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SYNPO2Q9UMS6 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SYNPO2Q9UMS6 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SYNPO2Q9UMS6 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
SYNPO2Q9UMS6 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SYNPO2Q9UMS6 AC136604.1-201ENST00000418535 575 ntBASIC18.61■□□□□ 0.57
SYNPO2Q9UMS6 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SYNPO2Q9UMS6 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SYNPO2Q9UMS6 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC18.61■□□□□ 0.57
SYNPO2Q9UMS6 CFL1-212ENST00000531413 636 ntTSL 3 BASIC18.61■□□□□ 0.57
SYNPO2Q9UMS6 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC18.61■□□□□ 0.57
SYNPO2Q9UMS6 AC023310.3-201ENST00000557027 670 ntBASIC18.61■□□□□ 0.57
SYNPO2Q9UMS6 AC100756.1-201ENST00000562736 682 ntBASIC18.61■□□□□ 0.57
SYNPO2Q9UMS6 RARRES2P5-201ENST00000564013 466 ntBASIC18.61■□□□□ 0.57
SYNPO2Q9UMS6 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC18.61■□□□□ 0.57
SYNPO2Q9UMS6 AC138749.3-201ENST00000567691 622 ntBASIC18.61■□□□□ 0.57
SYNPO2Q9UMS6 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC18.61■□□□□ 0.57
SYNPO2Q9UMS6 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC18.61■□□□□ 0.57
SYNPO2Q9UMS6 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC18.61■□□□□ 0.57
SYNPO2Q9UMS6 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
SYNPO2Q9UMS6 AC116165.1-201ENST00000611806 668 ntBASIC18.61■□□□□ 0.57
SYNPO2Q9UMS6 SRP9-204ENST00000619790 377 ntTSL 2 BASIC18.61■□□□□ 0.57
SYNPO2Q9UMS6 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SYNPO2Q9UMS6 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC18.61■□□□□ 0.57
SYNPO2Q9UMS6 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.61■□□□□ 0.57
SYNPO2Q9UMS6 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SYNPO2Q9UMS6 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC18.6■□□□□ 0.57
SYNPO2Q9UMS6 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
SYNPO2Q9UMS6 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SYNPO2Q9UMS6 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SYNPO2Q9UMS6 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SYNPO2Q9UMS6 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
SYNPO2Q9UMS6 NSL1-201ENST00000366976 722 ntTSL 2 BASIC18.6■□□□□ 0.57
SYNPO2Q9UMS6 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SYNPO2Q9UMS6 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC18.6■□□□□ 0.57
SYNPO2Q9UMS6 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC18.6■□□□□ 0.57
SYNPO2Q9UMS6 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC18.6■□□□□ 0.57
SYNPO2Q9UMS6 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC18.6■□□□□ 0.57
SYNPO2Q9UMS6 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC18.6■□□□□ 0.57
SYNPO2Q9UMS6 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
SYNPO2Q9UMS6 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SYNPO2Q9UMS6 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC18.6■□□□□ 0.57
SYNPO2Q9UMS6 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC18.6■□□□□ 0.57
SYNPO2Q9UMS6 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SYNPO2Q9UMS6 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SYNPO2Q9UMS6 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
SYNPO2Q9UMS6 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SYNPO2Q9UMS6 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC18.6■□□□□ 0.57
SYNPO2Q9UMS6 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
SYNPO2Q9UMS6 AC005052.1-201ENST00000625181 2492 ntBASIC18.6■□□□□ 0.57
SYNPO2Q9UMS6 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms