RNA–Protein interactions for RNA: ENST00000335674.1

LCE3A-201, Transcript of late cornified envelope 3A, humanhuman

APPRIS P1 BASIC

Gene LCE3A, Length 270 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3A-201ENST00000335674 NISCHQ9Y2I1 1504 aa38.84■■■■□ 3.81
LCE3A-201ENST00000335674 CCDC180Q9P1Z9 1646 aa34.85■■■■□ 3.17
LCE3A-201ENST00000335674 ABCC9O60706 1549 aa34.45■■■■□ 3.11
LCE3A-201ENST00000335674 RB1CC1Q8TDY2 1594 aa33.01■■■□□ 2.88
LCE3A-201ENST00000335674 NACADO15069 1562 aa32.87■■■□□ 2.85
LCE3A-201ENST00000335674 MYO15BQ96JP2 1530 aa32.56■■■□□ 2.8
LCE3A-201ENST00000335674 DCAF8L2P0C7V8 631 aa32.48■■■□□ 2.79
LCE3A-201ENST00000335674 UNC13AQ9UPW8 1703 aa32.27■■■□□ 2.76
LCE3A-201ENST00000335674 ZCCHC6Q5VYS8 1495 aaKnown RBP32.26■■■□□ 2.75
LCE3A-201ENST00000335674 DCAF1Q9Y4B6 1507 aa32.19■■■□□ 2.74
LCE3A-201ENST00000335674 DNAJC5BQ9UF47 199 aa32.09■■■□□ 2.73
LCE3A-201ENST00000335674 PABPN1Q86U42 306 aaKnown RBP eCLIP32.04■■■□□ 2.72
LCE3A-201ENST00000335674 BICRAQ9NZM4 1560 aa32.02■■■□□ 2.72
LCE3A-201ENST00000335674 SHROOM4Q9ULL8 1493 aa31.74■■■□□ 2.67
LCE3A-201ENST00000335674 SCRIBQ14160 1630 aa31.63■■■□□ 2.65
LCE3A-201ENST00000335674 EIF4G1Q04637 1599 aaKnown RBP31.22■■■□□ 2.59
LCE3A-201ENST00000335674 CC2D2AQ9P2K1 1620 aa31.21■■■□□ 2.59
LCE3A-201ENST00000335674 CECR2Q9BXF3 1484 aa31.07■■■□□ 2.56
LCE3A-201ENST00000335674 NCAPD3P42695 1498 aa30.31■■■□□ 2.44
LCE3A-201ENST00000335674 SMARCA4P51532 1647 aa30.26■■■□□ 2.44
LCE3A-201ENST00000335674 ATAD2BQ9ULI0 1458 aa30.22■■■□□ 2.43
LCE3A-201ENST00000335674 SMARCA2P51531 1590 aa30.2■■■□□ 2.42
LCE3A-201ENST00000335674 BAZ1AQ9NRL2 1556 aaPredicted RBP30.16■■■□□ 2.42
LCE3A-201ENST00000335674 HMGXB3Q12766 1538 aa30.15■■■□□ 2.42
LCE3A-201ENST00000335674 PEG3Q9GZU2 1588 aa30.03■■■□□ 2.4
LCE3A-201ENST00000335674 BAZ1BQ9UIG0 1483 aaKnown RBP29.93■■■□□ 2.38
LCE3A-201ENST00000335674 MROH2BQ7Z745 1585 aa29.89■■■□□ 2.38
LCE3A-201ENST00000335674 ERCC6Q03468 1493 aa29.76■■■□□ 2.35
LCE3A-201ENST00000335674 CUX2O14529 1486 aa29.74■■■□□ 2.35
LCE3A-201ENST00000335674 NESP48681 1621 aa29.67■■■□□ 2.34
LCE3A-201ENST00000335674 LAMC3Q9Y6N6 1575 aa29.62■■■□□ 2.33
LCE3A-201ENST00000335674 WIZO95785 1651 aa29.54■■■□□ 2.32
LCE3A-201ENST00000335674 THOC2Q8NI27 1593 aaKnown RBP29.42■■■□□ 2.3
LCE3A-201ENST00000335674 PDS5BQ9NTI5 1447 aa29.39■■■□□ 2.3
LCE3A-201ENST00000335674 DNAJC5Q9H3Z4 198 aa29.38■■■□□ 2.29
LCE3A-201ENST00000335674 CADPSQ9ULU8 1353 aa29.37■■■□□ 2.29
LCE3A-201ENST00000335674 KIF21AQ7Z4S6 1674 aa29.36■■■□□ 2.29
LCE3A-201ENST00000335674 RSF1Q96T23 1441 aaPredicted RBP29.36■■■□□ 2.29
LCE3A-201ENST00000335674 TOP2AP11388 1531 aaKnown RBP29.23■■■□□ 2.27
LCE3A-201ENST00000335674 MRC2Q9UBG0 1479 aa29.12■■■□□ 2.25
LCE3A-201ENST00000335674 CFTRP13569 1480 aa29.1■■■□□ 2.25
LCE3A-201ENST00000335674 WDR62O43379 1518 aa29.08■■■□□ 2.25
LCE3A-201ENST00000335674 CEP164Q9UPV0 1460 aa29.05■■■□□ 2.24
LCE3A-201ENST00000335674 FANCD2Q9BXW9 1451 aa29.02■■■□□ 2.24
LCE3A-201ENST00000335674 PRDM2Q13029 1718 aa28.91■■■□□ 2.22
LCE3A-201ENST00000335674 CCDC88BA6NC98 1476 aa28.85■■■□□ 2.21
LCE3A-201ENST00000335674 URB2Q14146 1524 aaKnown RBP28.76■■■□□ 2.19
LCE3A-201ENST00000335674 ABCC8Q09428 1581 aa28.53■■■□□ 2.16
LCE3A-201ENST00000335674 TOPBP1Q92547 1522 aa28.5■■■□□ 2.15
LCE3A-201ENST00000335674 IFT140Q96RY7 1462 aa28.47■■■□□ 2.15
LCE3A-201ENST00000335674 DNMBPQ6XZF7 1577 aa28.45■■■□□ 2.14
LCE3A-201ENST00000335674 ZNF608Q9ULD9 1512 aaPredicted RBP28.33■■■□□ 2.13
LCE3A-201ENST00000335674 OSCARQ8IYS5 282 aa28.32■■■□□ 2.12
LCE3A-201ENST00000335674 TARBP1Q13395 1621 aaKnown RBP28.26■■■□□ 2.11
LCE3A-201ENST00000335674 EIF4G3O43432 1585 aaKnown RBP28.25■■■□□ 2.11
LCE3A-201ENST00000335674 POLA1P09884 1462 aaPredicted RBP28.22■■■□□ 2.11
LCE3A-201ENST00000335674 AQRO60306 1485 aaKnown RBP eCLIP28.09■■■□□ 2.09
LCE3A-201ENST00000335674 WDR97A6NE52 1622 aa28.09■■■□□ 2.09
LCE3A-201ENST00000335674 CUX1P39880 1505 aa28.08■■■□□ 2.09
LCE3A-201ENST00000335674 SOGA1O94964 1423 aa28.07■■■□□ 2.08
LCE3A-201ENST00000335674 SUPT5HO00267 1087 aaKnown RBP28.06■■■□□ 2.08
LCE3A-201ENST00000335674 TRIM41Q8WV44 630 aa28.06■■■□□ 2.08
LCE3A-201ENST00000335674 FGD5Q6ZNL6 1462 aa28.06■■■□□ 2.08
LCE3A-201ENST00000335674 RAD54L2Q9Y4B4 1467 aa28.06■■■□□ 2.08
LCE3A-201ENST00000335674 CHD1O14646 1710 aa28■■■□□ 2.07
LCE3A-201ENST00000335674 RIMBP3CA6NJZ7 1639 aa27.96■■■□□ 2.07
LCE3A-201ENST00000335674 RIMBP3BA6NNM3 1639 aa27.96■■■□□ 2.07
LCE3A-201ENST00000335674 RIMBP3Q9UFD9 1639 aa27.96■■■□□ 2.07
LCE3A-201ENST00000335674 TDRD9Q8NDG6 1382 aaKnown RBP27.95■■■□□ 2.06
LCE3A-201ENST00000335674 ARHGEF11O15085 1522 aa27.9■■■□□ 2.06
LCE3A-201ENST00000335674 MAGI1Q96QZ7 1491 aaPredicted RBP27.86■■■□□ 2.05
LCE3A-201ENST00000335674 SNAPC4Q5SXM2 1469 aa27.85■■■□□ 2.05
LCE3A-201ENST00000335674 GRIN2BQ13224 1484 aa27.84■■■□□ 2.05
LCE3A-201ENST00000335674 ABCA10Q8WWZ4 1543 aa27.81■■■□□ 2.04
LCE3A-201ENST00000335674 FBLN2P98095 1184 aa27.8■■■□□ 2.04
LCE3A-201ENST00000335674 PBRM1Q86U86 1689 aa27.77■■■□□ 2.04
LCE3A-201ENST00000335674 ABCA5Q8WWZ7 1642 aa27.76■■■□□ 2.03
LCE3A-201ENST00000335674 GAPVD1Q14C86 1478 aa27.76■■■□□ 2.03
LCE3A-201ENST00000335674 BIVM-ERCC5R4GMW8 1640 aa27.75■■■□□ 2.03
LCE3A-201ENST00000335674 SYNJ2O15056 1496 aa27.74■■■□□ 2.03
LCE3A-201ENST00000335674 TOP2BQ02880 1626 aa27.74■■■□□ 2.03
LCE3A-201ENST00000335674 SYNJ1O43426 1573 aa27.71■■■□□ 2.03
LCE3A-201ENST00000335674 WRNQ14191 1432 aaPredicted RBP eCLIP27.71■■■□□ 2.03
LCE3A-201ENST00000335674 CLASP1Q7Z460 1538 aa27.71■■■□□ 2.03
LCE3A-201ENST00000335674 CHMP7Q8WUX9 453 aaPredicted RBP27.7■■■□□ 2.02
LCE3A-201ENST00000335674 ARAP1Q96P48 1450 aa27.63■■■□□ 2.01
LCE3A-201ENST00000335674 CYB5RLQ6IPT4 315 aa27.58■■■□□ 2.01
LCE3A-201ENST00000335674 ADAMTS12P58397 1594 aa27.52■■■□□ 2
LCE3A-201ENST00000335674 ERICH3Q5RHP9 1530 aa27.48■■□□□ 1.99
LCE3A-201ENST00000335674 GRIN2AQ12879 1464 aa27.48■■□□□ 1.99
LCE3A-201ENST00000335674 FHAD1B1AJZ9 1412 aa27.43■■□□□ 1.98
LCE3A-201ENST00000335674 NUP160Q12769 1436 aa27.41■■□□□ 1.98
LCE3A-201ENST00000335674 CEP170Q5SW79 1584 aa27.37■■□□□ 1.97
LCE3A-201ENST00000335674 SHROOM2Q13796 1616 aa27.3■■□□□ 1.96
LCE3A-201ENST00000335674 ERCC6L2Q5T890 1561 aa27.21■■□□□ 1.95
LCE3A-201ENST00000335674 TRHP20396 242 aaPredicted RBP27.18■■□□□ 1.94
LCE3A-201ENST00000335674 KIF27Q86VH2 1401 aa27.16■■□□□ 1.94
LCE3A-201ENST00000335674 CUL7Q14999 1698 aa27.14■■□□□ 1.93
LCE3A-201ENST00000335674 RUSC2Q8N2Y8 1516 aa27.13■■□□□ 1.93
LCE3A-201ENST00000335674 IGF1RP08069 1367 aa27.1■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms