Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
CDC42SE2Q9NRR3 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC11.3□□□□□ -0.6
CDC42SE2Q9NRR3 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
CDC42SE2Q9NRR3 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CDC42SE2Q9NRR3 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
CDC42SE2Q9NRR3 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
CDC42SE2Q9NRR3 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC11.29□□□□□ -0.6
CDC42SE2Q9NRR3 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
CDC42SE2Q9NRR3 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC11.29□□□□□ -0.6
CDC42SE2Q9NRR3 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
CDC42SE2Q9NRR3 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
CDC42SE2Q9NRR3 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
CDC42SE2Q9NRR3 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CDC42SE2Q9NRR3 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
CDC42SE2Q9NRR3 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
CDC42SE2Q9NRR3 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC11.29□□□□□ -0.6
CDC42SE2Q9NRR3 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC11.29□□□□□ -0.6
CDC42SE2Q9NRR3 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CDC42SE2Q9NRR3 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CDC42SE2Q9NRR3 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
CDC42SE2Q9NRR3 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC11.29□□□□□ -0.6
CDC42SE2Q9NRR3 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC11.29□□□□□ -0.6
CDC42SE2Q9NRR3 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
CDC42SE2Q9NRR3 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
CDC42SE2Q9NRR3 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
CDC42SE2Q9NRR3 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CDC42SE2Q9NRR3 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC11.29□□□□□ -0.6
CDC42SE2Q9NRR3 NMU-205ENST00000511469 756 ntTSL 3 BASIC11.29□□□□□ -0.6
CDC42SE2Q9NRR3 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
CDC42SE2Q9NRR3 MMP17-203ENST00000535004 719 ntTSL 3 BASIC11.29□□□□□ -0.6
CDC42SE2Q9NRR3 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
CDC42SE2Q9NRR3 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC11.29□□□□□ -0.6
CDC42SE2Q9NRR3 IRF8-202ENST00000562492 946 ntTSL 3 BASIC11.29□□□□□ -0.6
CDC42SE2Q9NRR3 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC11.29□□□□□ -0.6
CDC42SE2Q9NRR3 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC11.29□□□□□ -0.6
CDC42SE2Q9NRR3 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC11.29□□□□□ -0.6
CDC42SE2Q9NRR3 AC093458.2-201ENST00000623150 629 ntBASIC11.29□□□□□ -0.6
CDC42SE2Q9NRR3 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC11.29□□□□□ -0.6
CDC42SE2Q9NRR3 AC107918.4-202ENST00000641623 219 ntBASIC11.29□□□□□ -0.6
CDC42SE2Q9NRR3 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CDC42SE2Q9NRR3 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC11.29□□□□□ -0.6
CDC42SE2Q9NRR3 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CDC42SE2Q9NRR3 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
CDC42SE2Q9NRR3 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CDC42SE2Q9NRR3 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
CDC42SE2Q9NRR3 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
CDC42SE2Q9NRR3 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
CDC42SE2Q9NRR3 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CDC42SE2Q9NRR3 AC016027.1-202ENST00000607927 1699 ntBASIC11.29□□□□□ -0.6
CDC42SE2Q9NRR3 AL513477.1-201ENST00000602865 2407 ntBASIC11.29□□□□□ -0.6
CDC42SE2Q9NRR3 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
CDC42SE2Q9NRR3 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
CDC42SE2Q9NRR3 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CDC42SE2Q9NRR3 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC11.29□□□□□ -0.6
CDC42SE2Q9NRR3 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CDC42SE2Q9NRR3 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
CDC42SE2Q9NRR3 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC11.29□□□□□ -0.6
CDC42SE2Q9NRR3 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC11.29□□□□□ -0.6
CDC42SE2Q9NRR3 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CDC42SE2Q9NRR3 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
CDC42SE2Q9NRR3 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
CDC42SE2Q9NRR3 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CDC42SE2Q9NRR3 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
CDC42SE2Q9NRR3 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CDC42SE2Q9NRR3 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CDC42SE2Q9NRR3 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CDC42SE2Q9NRR3 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC11.28□□□□□ -0.6
CDC42SE2Q9NRR3 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
CDC42SE2Q9NRR3 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC11.28□□□□□ -0.6
CDC42SE2Q9NRR3 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CDC42SE2Q9NRR3 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
CDC42SE2Q9NRR3 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
CDC42SE2Q9NRR3 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CDC42SE2Q9NRR3 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
CDC42SE2Q9NRR3 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC11.28□□□□□ -0.6
CDC42SE2Q9NRR3 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
CDC42SE2Q9NRR3 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
CDC42SE2Q9NRR3 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
CDC42SE2Q9NRR3 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CDC42SE2Q9NRR3 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CDC42SE2Q9NRR3 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CDC42SE2Q9NRR3 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
CDC42SE2Q9NRR3 DFFB-203ENST00000341385 572 ntTSL 5 BASIC11.28□□□□□ -0.6
CDC42SE2Q9NRR3 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC11.28□□□□□ -0.6
CDC42SE2Q9NRR3 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CDC42SE2Q9NRR3 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
CDC42SE2Q9NRR3 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CDC42SE2Q9NRR3 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
CDC42SE2Q9NRR3 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC11.28□□□□□ -0.6
CDC42SE2Q9NRR3 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC11.28□□□□□ -0.6
CDC42SE2Q9NRR3 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
CDC42SE2Q9NRR3 AL160237.2-201ENST00000556165 472 ntBASIC11.28□□□□□ -0.6
CDC42SE2Q9NRR3 AC021087.4-201ENST00000563761 564 ntBASIC11.28□□□□□ -0.6
CDC42SE2Q9NRR3 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC11.28□□□□□ -0.6
CDC42SE2Q9NRR3 MIR3652-201ENST00000579335 131 ntBASIC11.28□□□□□ -0.6
CDC42SE2Q9NRR3 REXO1L6P-202ENST00000619970 1078 ntBASIC11.28□□□□□ -0.6
CDC42SE2Q9NRR3 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CDC42SE2Q9NRR3 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CDC42SE2Q9NRR3 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CDC42SE2Q9NRR3 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms