Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
COL8A2P25067 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
COL8A2P25067 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
COL8A2P25067 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
COL8A2P25067 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
COL8A2P25067 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC13.81□□□□□ -0.2
COL8A2P25067 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
COL8A2P25067 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
COL8A2P25067 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
COL8A2P25067 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
COL8A2P25067 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
COL8A2P25067 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
COL8A2P25067 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
COL8A2P25067 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC13.81□□□□□ -0.2
COL8A2P25067 HNRNPA1P40-201ENST00000426371 1278 ntBASIC13.81□□□□□ -0.2
COL8A2P25067 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC13.81□□□□□ -0.2
COL8A2P25067 AC092580.3-201ENST00000430932 139 ntBASIC13.81□□□□□ -0.2
COL8A2P25067 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC13.81□□□□□ -0.2
COL8A2P25067 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC13.81□□□□□ -0.2
COL8A2P25067 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
COL8A2P25067 AC093724.1-201ENST00000448659 1027 ntBASIC13.81□□□□□ -0.2
COL8A2P25067 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC13.81□□□□□ -0.2
COL8A2P25067 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
COL8A2P25067 HLA-J-202ENST00000469281 1241 ntBASIC13.81□□□□□ -0.2
COL8A2P25067 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
COL8A2P25067 AC027369.6-201ENST00000525520 931 ntBASIC13.81□□□□□ -0.2
COL8A2P25067 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC13.81□□□□□ -0.2
COL8A2P25067 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC13.81□□□□□ -0.2
COL8A2P25067 AL390754.1-201ENST00000619088 582 ntBASIC13.81□□□□□ -0.2
COL8A2P25067 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC13.81□□□□□ -0.2
COL8A2P25067 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
COL8A2P25067 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
COL8A2P25067 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC13.81□□□□□ -0.2
COL8A2P25067 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
COL8A2P25067 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
COL8A2P25067 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
COL8A2P25067 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
COL8A2P25067 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC13.81□□□□□ -0.2
COL8A2P25067 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
COL8A2P25067 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
COL8A2P25067 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
COL8A2P25067 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
COL8A2P25067 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
COL8A2P25067 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
COL8A2P25067 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
COL8A2P25067 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
COL8A2P25067 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
COL8A2P25067 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
COL8A2P25067 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
COL8A2P25067 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
COL8A2P25067 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
COL8A2P25067 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC13.8□□□□□ -0.2
COL8A2P25067 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
COL8A2P25067 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
COL8A2P25067 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
COL8A2P25067 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
COL8A2P25067 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC13.8□□□□□ -0.2
COL8A2P25067 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
COL8A2P25067 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC13.8□□□□□ -0.2
COL8A2P25067 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
COL8A2P25067 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC13.8□□□□□ -0.2
COL8A2P25067 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
COL8A2P25067 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
COL8A2P25067 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC13.8□□□□□ -0.2
COL8A2P25067 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
COL8A2P25067 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
COL8A2P25067 HYMAI-201ENST00000635591 3347 ntBASIC13.8□□□□□ -0.2
COL8A2P25067 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
COL8A2P25067 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
COL8A2P25067 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
COL8A2P25067 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
COL8A2P25067 VMA21-202ENST00000370361 693 ntTSL 5 BASIC13.8□□□□□ -0.2
COL8A2P25067 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
COL8A2P25067 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
COL8A2P25067 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
COL8A2P25067 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC13.8□□□□□ -0.2
COL8A2P25067 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
COL8A2P25067 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
COL8A2P25067 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC13.8□□□□□ -0.2
COL8A2P25067 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
COL8A2P25067 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
COL8A2P25067 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
COL8A2P25067 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC13.8□□□□□ -0.2
COL8A2P25067 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC13.8□□□□□ -0.2
COL8A2P25067 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC13.8□□□□□ -0.2
COL8A2P25067 AL158211.3-201ENST00000607385 239 ntBASIC13.8□□□□□ -0.2
COL8A2P25067 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
COL8A2P25067 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC13.8□□□□□ -0.2
COL8A2P25067 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC13.8□□□□□ -0.2
COL8A2P25067 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
COL8A2P25067 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
COL8A2P25067 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
COL8A2P25067 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC13.8□□□□□ -0.2
COL8A2P25067 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
COL8A2P25067 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
COL8A2P25067 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC13.8□□□□□ -0.2
COL8A2P25067 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC13.8□□□□□ -0.2
COL8A2P25067 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
COL8A2P25067 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
COL8A2P25067 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms