Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PFDN1O60925 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PFDN1O60925 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.6□□□□□ -0.07
PFDN1O60925 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PFDN1O60925 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PFDN1O60925 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
PFDN1O60925 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
PFDN1O60925 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC14.6□□□□□ -0.07
PFDN1O60925 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
PFDN1O60925 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC14.6□□□□□ -0.07
PFDN1O60925 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PFDN1O60925 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
PFDN1O60925 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PFDN1O60925 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PFDN1O60925 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
PFDN1O60925 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
PFDN1O60925 KRT8P11-201ENST00000409686 1436 ntBASIC14.59□□□□□ -0.07
PFDN1O60925 VAMP4-201ENST00000236192 5159 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
PFDN1O60925 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC14.59□□□□□ -0.07
PFDN1O60925 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
PFDN1O60925 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PFDN1O60925 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PFDN1O60925 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PFDN1O60925 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14.59□□□□□ -0.07
PFDN1O60925 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
PFDN1O60925 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
PFDN1O60925 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
PFDN1O60925 CTBP1-AS2-206ENST00000581398 5652 ntBASIC14.59□□□□□ -0.07
PFDN1O60925 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PFDN1O60925 AC005104.2-201ENST00000427818 678 ntBASIC14.59□□□□□ -0.07
PFDN1O60925 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PFDN1O60925 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
PFDN1O60925 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC14.59□□□□□ -0.07
PFDN1O60925 BID-214ENST00000617586 542 ntTSL 5 BASIC14.59□□□□□ -0.07
PFDN1O60925 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC14.59□□□□□ -0.07
PFDN1O60925 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
PFDN1O60925 ASL-204ENST00000395331 1538 ntTSL 5 BASIC14.59□□□□□ -0.07
PFDN1O60925 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
PFDN1O60925 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC14.59□□□□□ -0.07
PFDN1O60925 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PFDN1O60925 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
PFDN1O60925 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
PFDN1O60925 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
PFDN1O60925 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PFDN1O60925 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PFDN1O60925 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PFDN1O60925 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
PFDN1O60925 EML1-203ENST00000334192 4064 ntTSL 5 BASIC14.59□□□□□ -0.07
PFDN1O60925 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC14.59□□□□□ -0.07
PFDN1O60925 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
PFDN1O60925 AL024508.2-201ENST00000607749 1894 ntBASIC14.59□□□□□ -0.07
PFDN1O60925 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
PFDN1O60925 MIR193BHG-211ENST00000641433 5365 ntBASIC14.59□□□□□ -0.07
PFDN1O60925 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC14.59□□□□□ -0.07
PFDN1O60925 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
PFDN1O60925 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC14.58□□□□□ -0.07
PFDN1O60925 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC14.58□□□□□ -0.07
PFDN1O60925 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
PFDN1O60925 NUTM2HP-201ENST00000442076 2498 ntBASIC14.58□□□□□ -0.07
PFDN1O60925 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
PFDN1O60925 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
PFDN1O60925 COL6A3-206ENST00000409809 8916 ntTSL 5 BASIC14.58□□□□□ -0.07
PFDN1O60925 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
PFDN1O60925 WDR26-201ENST00000414423 6872 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PFDN1O60925 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PFDN1O60925 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC14.58□□□□□ -0.08
PFDN1O60925 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PFDN1O60925 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PFDN1O60925 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PFDN1O60925 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PFDN1O60925 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
PFDN1O60925 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PFDN1O60925 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PFDN1O60925 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC14.58□□□□□ -0.08
PFDN1O60925 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PFDN1O60925 AC123595.1-201ENST00000440769 1046 ntBASIC14.58□□□□□ -0.08
PFDN1O60925 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
PFDN1O60925 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC14.58□□□□□ -0.08
PFDN1O60925 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC14.58□□□□□ -0.08
PFDN1O60925 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PFDN1O60925 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC14.58□□□□□ -0.08
PFDN1O60925 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC14.58□□□□□ -0.08
PFDN1O60925 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PFDN1O60925 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC14.58□□□□□ -0.08
PFDN1O60925 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PFDN1O60925 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC14.58□□□□□ -0.08
PFDN1O60925 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
PFDN1O60925 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PFDN1O60925 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
PFDN1O60925 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
PFDN1O60925 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PFDN1O60925 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC14.58□□□□□ -0.08
PFDN1O60925 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PFDN1O60925 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC14.58□□□□□ -0.08
PFDN1O60925 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PFDN1O60925 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PFDN1O60925 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
PFDN1O60925 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
PFDN1O60925 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PFDN1O60925 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms