Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
RNF103-CHMP3A0A140T963 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RNF103-CHMP3A0A140T963 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC15.85■□□□□ 0.13
RNF103-CHMP3A0A140T963 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RNF103-CHMP3A0A140T963 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RNF103-CHMP3A0A140T963 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC15.85■□□□□ 0.13
RNF103-CHMP3A0A140T963 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC15.85■□□□□ 0.13
RNF103-CHMP3A0A140T963 NMU-205ENST00000511469 756 ntTSL 3 BASIC15.85■□□□□ 0.13
RNF103-CHMP3A0A140T963 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RNF103-CHMP3A0A140T963 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC15.85■□□□□ 0.13
RNF103-CHMP3A0A140T963 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC15.85■□□□□ 0.13
RNF103-CHMP3A0A140T963 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC15.85■□□□□ 0.13
RNF103-CHMP3A0A140T963 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RNF103-CHMP3A0A140T963 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
RNF103-CHMP3A0A140T963 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC15.85■□□□□ 0.13
RNF103-CHMP3A0A140T963 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC15.85■□□□□ 0.13
RNF103-CHMP3A0A140T963 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC15.85■□□□□ 0.13
RNF103-CHMP3A0A140T963 AC013467.2-201ENST00000605472 835 ntBASIC15.85■□□□□ 0.13
RNF103-CHMP3A0A140T963 AC004706.3-202ENST00000621574 984 ntBASIC15.85■□□□□ 0.13
RNF103-CHMP3A0A140T963 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RNF103-CHMP3A0A140T963 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RNF103-CHMP3A0A140T963 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RNF103-CHMP3A0A140T963 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC15.85■□□□□ 0.13
RNF103-CHMP3A0A140T963 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
RNF103-CHMP3A0A140T963 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
RNF103-CHMP3A0A140T963 TOP3BP1-201ENST00000420768 1380 ntBASIC15.85■□□□□ 0.13
RNF103-CHMP3A0A140T963 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC15.85■□□□□ 0.13
RNF103-CHMP3A0A140T963 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC15.85■□□□□ 0.13
RNF103-CHMP3A0A140T963 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RNF103-CHMP3A0A140T963 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC15.85■□□□□ 0.13
RNF103-CHMP3A0A140T963 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC15.85■□□□□ 0.13
RNF103-CHMP3A0A140T963 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RNF103-CHMP3A0A140T963 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RNF103-CHMP3A0A140T963 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RNF103-CHMP3A0A140T963 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
RNF103-CHMP3A0A140T963 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RNF103-CHMP3A0A140T963 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RNF103-CHMP3A0A140T963 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
RNF103-CHMP3A0A140T963 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC15.84■□□□□ 0.13
RNF103-CHMP3A0A140T963 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RNF103-CHMP3A0A140T963 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RNF103-CHMP3A0A140T963 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC15.84■□□□□ 0.13
RNF103-CHMP3A0A140T963 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC15.84■□□□□ 0.13
RNF103-CHMP3A0A140T963 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RNF103-CHMP3A0A140T963 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
RNF103-CHMP3A0A140T963 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
RNF103-CHMP3A0A140T963 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RNF103-CHMP3A0A140T963 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RNF103-CHMP3A0A140T963 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RNF103-CHMP3A0A140T963 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RNF103-CHMP3A0A140T963 AKR1C7P-201ENST00000305623 895 ntBASIC15.84■□□□□ 0.13
RNF103-CHMP3A0A140T963 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
RNF103-CHMP3A0A140T963 ELK2BP-201ENST00000415014 1224 ntBASIC15.84■□□□□ 0.13
RNF103-CHMP3A0A140T963 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC15.84■□□□□ 0.13
RNF103-CHMP3A0A140T963 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RNF103-CHMP3A0A140T963 PAWRP1-201ENST00000451083 565 ntBASIC15.84■□□□□ 0.13
RNF103-CHMP3A0A140T963 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC15.84■□□□□ 0.13
RNF103-CHMP3A0A140T963 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RNF103-CHMP3A0A140T963 SAPCD2P3-201ENST00000455031 850 ntBASIC15.84■□□□□ 0.13
RNF103-CHMP3A0A140T963 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC15.84■□□□□ 0.13
RNF103-CHMP3A0A140T963 SKP2-204ENST00000508514 821 ntTSL 3 BASIC15.84■□□□□ 0.13
RNF103-CHMP3A0A140T963 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
RNF103-CHMP3A0A140T963 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RNF103-CHMP3A0A140T963 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC15.84■□□□□ 0.13
RNF103-CHMP3A0A140T963 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC15.84■□□□□ 0.13
RNF103-CHMP3A0A140T963 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC15.84■□□□□ 0.13
RNF103-CHMP3A0A140T963 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC15.84■□□□□ 0.13
RNF103-CHMP3A0A140T963 LINC01711-201ENST00000598340 967 ntBASIC15.84■□□□□ 0.13
RNF103-CHMP3A0A140T963 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RNF103-CHMP3A0A140T963 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC15.84■□□□□ 0.13
RNF103-CHMP3A0A140T963 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.84■□□□□ 0.13
RNF103-CHMP3A0A140T963 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RNF103-CHMP3A0A140T963 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC15.84■□□□□ 0.13
RNF103-CHMP3A0A140T963 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC15.84■□□□□ 0.13
RNF103-CHMP3A0A140T963 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RNF103-CHMP3A0A140T963 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
RNF103-CHMP3A0A140T963 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RNF103-CHMP3A0A140T963 AC010491.1-201ENST00000563101 2797 ntBASIC15.84■□□□□ 0.13
RNF103-CHMP3A0A140T963 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
RNF103-CHMP3A0A140T963 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
RNF103-CHMP3A0A140T963 SBF1P1-201ENST00000444527 5631 ntBASIC15.84■□□□□ 0.13
RNF103-CHMP3A0A140T963 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RNF103-CHMP3A0A140T963 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
RNF103-CHMP3A0A140T963 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RNF103-CHMP3A0A140T963 HLA-DQB2-231ENST00000435145 2026 ntBASIC15.84■□□□□ 0.13
RNF103-CHMP3A0A140T963 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
RNF103-CHMP3A0A140T963 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
RNF103-CHMP3A0A140T963 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
RNF103-CHMP3A0A140T963 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
RNF103-CHMP3A0A140T963 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
RNF103-CHMP3A0A140T963 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
RNF103-CHMP3A0A140T963 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
RNF103-CHMP3A0A140T963 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
RNF103-CHMP3A0A140T963 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
RNF103-CHMP3A0A140T963 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
RNF103-CHMP3A0A140T963 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC15.83■□□□□ 0.13
RNF103-CHMP3A0A140T963 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC15.83■□□□□ 0.12
RNF103-CHMP3A0A140T963 LINC02228-204ENST00000642115 2962 ntBASIC15.83■□□□□ 0.12
RNF103-CHMP3A0A140T963 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
RNF103-CHMP3A0A140T963 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms