Protein–RNA interactions for Protein: Q8NHY2

RFWD2, E3 ubiquitin-protein ligase RFWD2, humanhuman

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2Q8NHY2 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RFWD2Q8NHY2 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
RFWD2Q8NHY2 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RFWD2Q8NHY2 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
RFWD2Q8NHY2 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RFWD2Q8NHY2 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
RFWD2Q8NHY2 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.25■□□□□ 0.19
RFWD2Q8NHY2 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC16.25■□□□□ 0.19
RFWD2Q8NHY2 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.25■□□□□ 0.19
RFWD2Q8NHY2 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.25■□□□□ 0.19
RFWD2Q8NHY2 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
RFWD2Q8NHY2 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.25■□□□□ 0.19
RFWD2Q8NHY2 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.25■□□□□ 0.19
RFWD2Q8NHY2 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.25■□□□□ 0.19
RFWD2Q8NHY2 COPE-211ENST00000600932 1144 ntTSL 5 BASIC16.25■□□□□ 0.19
RFWD2Q8NHY2 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC16.25■□□□□ 0.19
RFWD2Q8NHY2 AC010654.1-201ENST00000615722 808 ntBASIC16.25■□□□□ 0.19
RFWD2Q8NHY2 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.25■□□□□ 0.19
RFWD2Q8NHY2 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.25■□□□□ 0.19
RFWD2Q8NHY2 AP000867.4-201ENST00000641616 219 ntBASIC16.25■□□□□ 0.19
RFWD2Q8NHY2 AL009178.2-201ENST00000597278 2719 ntBASIC16.25■□□□□ 0.19
RFWD2Q8NHY2 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.25■□□□□ 0.19
RFWD2Q8NHY2 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RFWD2Q8NHY2 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RFWD2Q8NHY2 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC16.25■□□□□ 0.19
RFWD2Q8NHY2 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.25■□□□□ 0.19
RFWD2Q8NHY2 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
RFWD2Q8NHY2 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RFWD2Q8NHY2 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RFWD2Q8NHY2 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
RFWD2Q8NHY2 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RFWD2Q8NHY2 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RFWD2Q8NHY2 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RFWD2Q8NHY2 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC16.25■□□□□ 0.19
RFWD2Q8NHY2 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
RFWD2Q8NHY2 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
RFWD2Q8NHY2 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RFWD2Q8NHY2 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
RFWD2Q8NHY2 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RFWD2Q8NHY2 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RFWD2Q8NHY2 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.24■□□□□ 0.19
RFWD2Q8NHY2 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.24■□□□□ 0.19
RFWD2Q8NHY2 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RFWD2Q8NHY2 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RFWD2Q8NHY2 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RFWD2Q8NHY2 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
RFWD2Q8NHY2 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
RFWD2Q8NHY2 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
RFWD2Q8NHY2 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC16.24■□□□□ 0.19
RFWD2Q8NHY2 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC16.24■□□□□ 0.19
RFWD2Q8NHY2 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RFWD2Q8NHY2 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RFWD2Q8NHY2 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RFWD2Q8NHY2 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RFWD2Q8NHY2 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.24■□□□□ 0.19
RFWD2Q8NHY2 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
RFWD2Q8NHY2 BET1L-202ENST00000332865 533 ntTSL 5 BASIC16.24■□□□□ 0.19
RFWD2Q8NHY2 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RFWD2Q8NHY2 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RFWD2Q8NHY2 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RFWD2Q8NHY2 VENTXP7-201ENST00000475503 772 ntBASIC16.24■□□□□ 0.19
RFWD2Q8NHY2 MPDU1-223ENST00000582151 728 ntBASIC16.24■□□□□ 0.19
RFWD2Q8NHY2 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
RFWD2Q8NHY2 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC16.24■□□□□ 0.19
RFWD2Q8NHY2 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC16.24■□□□□ 0.19
RFWD2Q8NHY2 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RFWD2Q8NHY2 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.24■□□□□ 0.19
RFWD2Q8NHY2 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RFWD2Q8NHY2 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC16.24■□□□□ 0.19
RFWD2Q8NHY2 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.24■□□□□ 0.19
RFWD2Q8NHY2 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16.24■□□□□ 0.19
RFWD2Q8NHY2 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RFWD2Q8NHY2 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.24■□□□□ 0.19
RFWD2Q8NHY2 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
RFWD2Q8NHY2 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RFWD2Q8NHY2 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RFWD2Q8NHY2 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
RFWD2Q8NHY2 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RFWD2Q8NHY2 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RFWD2Q8NHY2 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RFWD2Q8NHY2 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RFWD2Q8NHY2 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RFWD2Q8NHY2 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.24■□□□□ 0.19
RFWD2Q8NHY2 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RFWD2Q8NHY2 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
RFWD2Q8NHY2 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RFWD2Q8NHY2 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RFWD2Q8NHY2 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RFWD2Q8NHY2 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RFWD2Q8NHY2 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.23■□□□□ 0.19
RFWD2Q8NHY2 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
RFWD2Q8NHY2 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RFWD2Q8NHY2 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RFWD2Q8NHY2 GSN-206ENST00000394353 2311 ntTSL 2 BASIC16.23■□□□□ 0.19
RFWD2Q8NHY2 C1R-202ENST00000536053 2347 ntTSL 2 BASIC16.23■□□□□ 0.19
RFWD2Q8NHY2 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RFWD2Q8NHY2 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RFWD2Q8NHY2 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16.23■□□□□ 0.19
RFWD2Q8NHY2 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RFWD2Q8NHY2 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms