Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 TMEM18-201ENST00000281017 2762 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
SVIPQ8NHG7 CNTROB-203ENST00000565740 2783 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
SVIPQ8NHG7 GFM2-207ENST00000509430 3047 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
SVIPQ8NHG7 FLNA-203ENST00000369850 8382 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
SVIPQ8NHG7 TIGAR-204ENST00000635110 3633 ntTSL 5 BASIC10.05□□□□□ -0.8
SVIPQ8NHG7 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
SVIPQ8NHG7 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
SVIPQ8NHG7 ZNF148-207ENST00000492394 2949 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
SVIPQ8NHG7 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
SVIPQ8NHG7 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC10.05□□□□□ -0.8
SVIPQ8NHG7 ABCB9-206ENST00000442028 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
SVIPQ8NHG7 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC10.05□□□□□ -0.8
SVIPQ8NHG7 ARHGEF34P-201ENST00000483587 4532 ntBASIC10.05□□□□□ -0.8
SVIPQ8NHG7 UBE2V2-204ENST00000520809 2450 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
SVIPQ8NHG7 FCAMR-203ENST00000400962 1898 ntAPPRIS P3 TSL 5 BASIC10.05□□□□□ -0.8
SVIPQ8NHG7 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
SVIPQ8NHG7 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
SVIPQ8NHG7 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
SVIPQ8NHG7 ZNF488-201ENST00000585316 3496 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
SVIPQ8NHG7 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC10.05□□□□□ -0.8
SVIPQ8NHG7 TRAPPC2L-211ENST00000565504 3102 ntTSL 2 BASIC10.05□□□□□ -0.8
SVIPQ8NHG7 GPR161-209ENST00000539777 7655 ntTSL 2 BASIC10.05□□□□□ -0.8
SVIPQ8NHG7 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
SVIPQ8NHG7 CHID1-205ENST00000454838 3255 ntTSL 5 BASIC10.05□□□□□ -0.8
SVIPQ8NHG7 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
SVIPQ8NHG7 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.8
SVIPQ8NHG7 DENND1B-201ENST00000235453 2195 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
SVIPQ8NHG7 LINC01238-203ENST00000429456 2170 ntTSL 2 BASIC10.05□□□□□ -0.8
SVIPQ8NHG7 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC10.05□□□□□ -0.8
SVIPQ8NHG7 SNRK-201ENST00000296088 5183 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
SVIPQ8NHG7 SH3KBP1-203ENST00000379716 3819 ntTSL 2 BASIC10.05□□□□□ -0.8
SVIPQ8NHG7 LINC01471-201ENST00000461398 3079 ntTSL 5 BASIC10.05□□□□□ -0.8
SVIPQ8NHG7 DPP9-214ENST00000598800 3098 ntTSL 5 BASIC10.05□□□□□ -0.8
SVIPQ8NHG7 CACNA1G-217ENST00000507336 7116 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
SVIPQ8NHG7 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC10.05□□□□□ -0.8
SVIPQ8NHG7 ZNF407-201ENST00000299687 7948 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
SVIPQ8NHG7 AGPAT1-206ENST00000395499 2496 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
SVIPQ8NHG7 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
SVIPQ8NHG7 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
SVIPQ8NHG7 NUP62-201ENST00000352066 2870 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SVIPQ8NHG7 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
SVIPQ8NHG7 FAM155A-201ENST00000375915 8503 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SVIPQ8NHG7 AC092902.5-201ENST00000641650 3256 ntBASIC10.04□□□□□ -0.8
SVIPQ8NHG7 SMIM2-AS1-203ENST00000618753 2101 ntTSL 4 BASIC10.04□□□□□ -0.8
SVIPQ8NHG7 HNRNPUL1-202ENST00000352456 3426 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
SVIPQ8NHG7 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SVIPQ8NHG7 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SVIPQ8NHG7 ADGRG5-202ENST00000349457 3557 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SVIPQ8NHG7 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC10.04□□□□□ -0.8
SVIPQ8NHG7 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
SVIPQ8NHG7 PLOD2-201ENST00000282903 3732 ntAPPRIS P4 TSL 1 (best) BASIC10.04□□□□□ -0.8
SVIPQ8NHG7 GNG11-201ENST00000248564 3055 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SVIPQ8NHG7 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC10.04□□□□□ -0.8
SVIPQ8NHG7 AGAP4-203ENST00000448048 2439 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
SVIPQ8NHG7 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SVIPQ8NHG7 CLSTN3-207ENST00000537408 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
SVIPQ8NHG7 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SVIPQ8NHG7 LINC02487-201ENST00000400831 2557 ntTSL 2 BASIC10.04□□□□□ -0.8
SVIPQ8NHG7 PLCB3-201ENST00000279230 4197 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SVIPQ8NHG7 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
SVIPQ8NHG7 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC10.04□□□□□ -0.8
SVIPQ8NHG7 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SVIPQ8NHG7 MMS19-203ENST00000370782 3532 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
SVIPQ8NHG7 HM13-224ENST00000498035 3932 ntTSL 2 BASIC10.04□□□□□ -0.8
SVIPQ8NHG7 CTBP2-201ENST00000309035 3669 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
SVIPQ8NHG7 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
SVIPQ8NHG7 CACNA1G-214ENST00000505165 6633 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
SVIPQ8NHG7 RPUSD4-208ENST00000533628 2053 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
SVIPQ8NHG7 CHCHD1-202ENST00000372837 1202 ntTSL 2 BASIC10.04□□□□□ -0.8
SVIPQ8NHG7 SEPT7P2-202ENST00000398921 823 ntBASIC10.04□□□□□ -0.8
SVIPQ8NHG7 PGGT1BP1-201ENST00000455321 1023 ntBASIC10.04□□□□□ -0.8
SVIPQ8NHG7 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC10.04□□□□□ -0.8
SVIPQ8NHG7 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC10.04□□□□□ -0.8
SVIPQ8NHG7 PLEKHG5-205ENST00000377740 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
SVIPQ8NHG7 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SVIPQ8NHG7 PPP2R2B-204ENST00000394413 1982 ntTSL 2 BASIC10.04□□□□□ -0.8
SVIPQ8NHG7 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
SVIPQ8NHG7 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SVIPQ8NHG7 MYLK-204ENST00000360304 7738 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
SVIPQ8NHG7 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC10.04□□□□□ -0.8
SVIPQ8NHG7 CCDC144CP-201ENST00000340196 2823 ntTSL 2 BASIC10.04□□□□□ -0.8
SVIPQ8NHG7 API5-203ENST00000455725 2257 ntTSL 2 BASIC10.04□□□□□ -0.8
SVIPQ8NHG7 KDM2A-201ENST00000308783 3666 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
SVIPQ8NHG7 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SVIPQ8NHG7 NOS3-201ENST00000297494 4388 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SVIPQ8NHG7 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC10.04□□□□□ -0.8
SVIPQ8NHG7 SYBU-222ENST00000529175 2717 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
SVIPQ8NHG7 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SVIPQ8NHG7 PKP4P1-201ENST00000426801 2158 ntBASIC10.04□□□□□ -0.8
SVIPQ8NHG7 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC10.04□□□□□ -0.8
SVIPQ8NHG7 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC10.04□□□□□ -0.8
SVIPQ8NHG7 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC10.04□□□□□ -0.8
SVIPQ8NHG7 VPS13A-204ENST00000376634 10269 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
SVIPQ8NHG7 PIK3CG-205ENST00000496166 5197 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SVIPQ8NHG7 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
SVIPQ8NHG7 HNRNPMP1-201ENST00000560685 1768 ntBASIC10.03□□□□□ -0.8
SVIPQ8NHG7 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SVIPQ8NHG7 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
SVIPQ8NHG7 LRRN2-202ENST00000367176 3211 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SVIPQ8NHG7 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms