RNA–Protein interactions for RNA: ENST00000309035.10

CTBP2-201, Transcript of C-terminal binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene CTBP2, Length 3,669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTBP2-201ENST00000309035 NISCHQ9Y2I1 1504 aa23.29■■□□□ 1.32
CTBP2-201ENST00000309035 SHROOM4Q9ULL8 1493 aa20.57■□□□□ 0.88
CTBP2-201ENST00000309035 SUPT5HO00267 1087 aaKnown RBP20.48■□□□□ 0.87
CTBP2-201ENST00000309035 CCDC180Q9P1Z9 1646 aa20.14■□□□□ 0.82
CTBP2-201ENST00000309035 DCAF8L2P0C7V8 631 aa20.07■□□□□ 0.8
CTBP2-201ENST00000309035 PCGF6Q9BYE7 350 aa19.87■□□□□ 0.77
CTBP2-201ENST00000309035 PPARGC1BQ86YN6 1023 aaKnown RBP19.7■□□□□ 0.74
CTBP2-201ENST00000309035 ABCC9O60706 1549 aa19.6■□□□□ 0.73
CTBP2-201ENST00000309035 HRCP23327 699 aa19.6■□□□□ 0.73
CTBP2-201ENST00000309035 ZCCHC6Q5VYS8 1495 aaKnown RBP19.48■□□□□ 0.71
CTBP2-201ENST00000309035 EHMT2Q96KQ7 1210 aa19.47■□□□□ 0.71
CTBP2-201ENST00000309035 CHIC1Q5VXU3 224 aa19.41■□□□□ 0.7
CTBP2-201ENST00000309035 LOC105371045A0A1W2PR82 267 aa19.35■□□□□ 0.69
CTBP2-201ENST00000309035 MYO15BQ96JP2 1530 aa19.24■□□□□ 0.67
CTBP2-201ENST00000309035 FAM9AQ8IZU1 332 aaPredicted RBP19.15■□□□□ 0.66
CTBP2-201ENST00000309035 DCAF1Q9Y4B6 1507 aa19.07■□□□□ 0.64
CTBP2-201ENST00000309035 NACADO15069 1562 aa18.94■□□□□ 0.62
CTBP2-201ENST00000309035 RB1CC1Q8TDY2 1594 aa18.87■□□□□ 0.61
CTBP2-201ENST00000309035 TTBK1Q5TCY1 1321 aaPredicted RBP18.86■□□□□ 0.61
CTBP2-201ENST00000309035 TRIM26Q12899 539 aaPredicted RBP18.84■□□□□ 0.61
CTBP2-201ENST00000309035 SCRIBQ14160 1630 aa18.82■□□□□ 0.6
CTBP2-201ENST00000309035 PELP1Q8IZL8 1130 aaKnown RBP18.7■□□□□ 0.58
CTBP2-201ENST00000309035 TRIM41Q8WV44 630 aa18.69■□□□□ 0.58
CTBP2-201ENST00000309035 PABPN1Q86U42 306 aaKnown RBP eCLIP18.63■□□□□ 0.57
CTBP2-201ENST00000309035 SCAF1Q9H7N4 1312 aaKnown RBP18.52■□□□□ 0.56
CTBP2-201ENST00000309035 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.51■□□□□ 0.55
CTBP2-201ENST00000309035 ZEB1P37275 1124 aaPredicted RBP18.5■□□□□ 0.55
CTBP2-201ENST00000309035 CCER1Q8TC90 406 aaPredicted RBP18.5■□□□□ 0.55
CTBP2-201ENST00000309035 YTHDC1Q96MU7 727 aaKnown RBP18.39■□□□□ 0.53
CTBP2-201ENST00000309035 GTF3C3Q9Y5Q9 886 aa18.23■□□□□ 0.51
CTBP2-201ENST00000309035 NEUROD1Q13562 356 aa18.22■□□□□ 0.51
CTBP2-201ENST00000309035 UNC13AQ9UPW8 1703 aa18.21■□□□□ 0.51
CTBP2-201ENST00000309035 CECR2Q9BXF3 1484 aa18.2■□□□□ 0.5
CTBP2-201ENST00000309035 DIEXFQ68CQ4 756 aaKnown RBP18.16■□□□□ 0.5
CTBP2-201ENST00000309035 CENPBP07199 599 aaPredicted RBP18.16■□□□□ 0.5
CTBP2-201ENST00000309035 RANGAP1P46060 587 aaPredicted RBP18.14■□□□□ 0.5
CTBP2-201ENST00000309035 ACIN1Q9UKV3 1341 aaKnown RBP18.12■□□□□ 0.49
CTBP2-201ENST00000309035 BICRAQ9NZM4 1560 aa18.12■□□□□ 0.49
CTBP2-201ENST00000309035 RSF1Q96T23 1441 aaPredicted RBP18.11■□□□□ 0.49
CTBP2-201ENST00000309035 MROH2BQ7Z745 1585 aa18.03■□□□□ 0.48
CTBP2-201ENST00000309035 BAZ1AQ9NRL2 1556 aaPredicted RBP18.02■□□□□ 0.48
CTBP2-201ENST00000309035 UBTFP17480 764 aaKnown RBP17.99■□□□□ 0.47
CTBP2-201ENST00000309035 HNRNPUL2Q1KMD3 747 aaKnown RBP17.96■□□□□ 0.47
CTBP2-201ENST00000309035 MYT1Q01538 1121 aa17.94■□□□□ 0.46
CTBP2-201ENST00000309035 SMARCA4P51532 1647 aa17.88■□□□□ 0.45
CTBP2-201ENST00000309035 WIZO95785 1651 aa17.85■□□□□ 0.45
CTBP2-201ENST00000309035 EIF4G1Q04637 1599 aaKnown RBP17.72■□□□□ 0.43
CTBP2-201ENST00000309035 ZNF316A6NFI3 1004 aaPredicted RBP17.71■□□□□ 0.43
CTBP2-201ENST00000309035 BAZ1BQ9UIG0 1483 aaKnown RBP17.71■□□□□ 0.43
CTBP2-201ENST00000309035 ATAD2BQ9ULI0 1458 aa17.7■□□□□ 0.42
CTBP2-201ENST00000309035 APLP2Q06481 763 aa17.7■□□□□ 0.42
CTBP2-201ENST00000309035 MIER1Q8N108 512 aa17.7■□□□□ 0.42
CTBP2-201ENST00000309035 SMARCA2P51531 1590 aa17.68■□□□□ 0.42
CTBP2-201ENST00000309035 TOP2AP11388 1531 aaKnown RBP17.63■□□□□ 0.41
CTBP2-201ENST00000309035 ITGAEP38570 1179 aa17.57■□□□□ 0.4
CTBP2-201ENST00000309035 CCDC88BA6NC98 1476 aa17.56■□□□□ 0.4
CTBP2-201ENST00000309035 BCANQ96GW7 911 aa17.52■□□□□ 0.39
CTBP2-201ENST00000309035 NCAPD3P42695 1498 aa17.51■□□□□ 0.39
CTBP2-201ENST00000309035 CC2D2AQ9P2K1 1620 aa17.51■□□□□ 0.39
CTBP2-201ENST00000309035 PEG3Q9GZU2 1588 aa17.5■□□□□ 0.39
CTBP2-201ENST00000309035 CSRNP3Q8WYN3 585 aa17.46■□□□□ 0.39
CTBP2-201ENST00000309035 CEP162Q5TB80 1403 aa17.44■□□□□ 0.38
CTBP2-201ENST00000309035 HMGXB3Q12766 1538 aa17.4■□□□□ 0.38
CTBP2-201ENST00000309035 SOGA1O94964 1423 aa17.39■□□□□ 0.37
CTBP2-201ENST00000309035 ABCC8Q09428 1581 aa17.37■□□□□ 0.37
CTBP2-201ENST00000309035 DNAJC5BQ9UF47 199 aa17.32■□□□□ 0.36
CTBP2-201ENST00000309035 ATP1B4Q9UN42 357 aaPredicted RBP17.28■□□□□ 0.36
CTBP2-201ENST00000309035 RUSC2Q8N2Y8 1516 aa17.25■□□□□ 0.35
CTBP2-201ENST00000309035 CADPSQ9ULU8 1353 aa17.21■□□□□ 0.35
CTBP2-201ENST00000309035 ERICH6Q7L0X2 663 aa17.19■□□□□ 0.34
CTBP2-201ENST00000309035 HIRIP3Q9BW71 556 aaPredicted RBP17.19■□□□□ 0.34
CTBP2-201ENST00000309035 SUPT16HQ9Y5B9 1047 aaKnown RBP17.18■□□□□ 0.34
CTBP2-201ENST00000309035 WRNQ14191 1432 aaPredicted RBP eCLIP17.17■□□□□ 0.34
CTBP2-201ENST00000309035 BCL11AQ9H165 835 aa17.16■□□□□ 0.34
CTBP2-201ENST00000309035 TNIKQ9UKE5 1360 aa17.16■□□□□ 0.34
CTBP2-201ENST00000309035 KCNH8Q96L42 1107 aa17.15■□□□□ 0.34
CTBP2-201ENST00000309035 CFTRP13569 1480 aa17.11■□□□□ 0.33
CTBP2-201ENST00000309035 FKBP8Q14318 412 aa17.11■□□□□ 0.33
CTBP2-201ENST00000309035 CLIP1P30622 1438 aa17.1■□□□□ 0.33
CTBP2-201ENST00000309035 NEFLP07196 543 aa17.08■□□□□ 0.33
CTBP2-201ENST00000309035 DDX10Q13206 875 aaKnown RBP17.08■□□□□ 0.33
CTBP2-201ENST00000309035 TRIM52Q96A61 297 aa17.07■□□□□ 0.32
CTBP2-201ENST00000309035 NESP48681 1621 aa17.07■□□□□ 0.32
CTBP2-201ENST00000309035 CNGB1Q14028 1251 aaPredicted RBP17.04■□□□□ 0.32
CTBP2-201ENST00000309035 GOLGA3Q08378 1498 aa17.03■□□□□ 0.32
CTBP2-201ENST00000309035 FAM50AQ14320 339 aaKnown RBP17.02■□□□□ 0.31
CTBP2-201ENST00000309035 FANCD2Q9BXW9 1451 aa17.01■□□□□ 0.31
CTBP2-201ENST00000309035 TSHZ2Q9NRE2 1034 aa17.01■□□□□ 0.31
CTBP2-201ENST00000309035 PDS5BQ9NTI5 1447 aa17■□□□□ 0.31
CTBP2-201ENST00000309035 KANK4Q5T7N3 995 aaPredicted RBP16.99■□□□□ 0.31
CTBP2-201ENST00000309035 IRX6P78412 446 aaPredicted RBP16.97■□□□□ 0.31
CTBP2-201ENST00000309035 P3H3Q8IVL6 736 aa16.97■□□□□ 0.31
CTBP2-201ENST00000309035 ANP32EQ9BTT0 268 aa16.95■□□□□ 0.3
CTBP2-201ENST00000309035 CEP164Q9UPV0 1460 aa16.93■□□□□ 0.3
CTBP2-201ENST00000309035 SYNJ1O43426 1573 aa16.91■□□□□ 0.3
CTBP2-201ENST00000309035 LAMC3Q9Y6N6 1575 aa16.91■□□□□ 0.3
CTBP2-201ENST00000309035 SIN3AQ96ST3 1273 aa16.91■□□□□ 0.3
CTBP2-201ENST00000309035 ERCC6Q03468 1493 aa16.91■□□□□ 0.3
CTBP2-201ENST00000309035 CUX1P39880 1505 aa16.84■□□□□ 0.29
CTBP2-201ENST00000309035 VPS8Q8N3P4 1428 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms