RNA–Protein interactions for RNA: ENST00000565504.5

TRAPPC2L-211, Transcript of trafficking protein particle complex 2 like, humanhuman

TSL 2 BASIC

Gene TRAPPC2L, Length 3,102 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC2L-211ENST00000565504 NISCHQ9Y2I1 1504 aa25.61■■□□□ 1.69
TRAPPC2L-211ENST00000565504 SHROOM4Q9ULL8 1493 aa22.22■■□□□ 1.15
TRAPPC2L-211ENST00000565504 SUPT5HO00267 1087 aaKnown RBP21.98■■□□□ 1.11
TRAPPC2L-211ENST00000565504 ZCCHC6Q5VYS8 1495 aaKnown RBP21.69■■□□□ 1.06
TRAPPC2L-211ENST00000565504 CCDC180Q9P1Z9 1646 aa21.53■■□□□ 1.04
TRAPPC2L-211ENST00000565504 CHIC1Q5VXU3 224 aa21.44■■□□□ 1.02
TRAPPC2L-211ENST00000565504 DCAF8L2P0C7V8 631 aa21.42■■□□□ 1.02
TRAPPC2L-211ENST00000565504 MYO15BQ96JP2 1530 aa21.34■■□□□ 1.01
TRAPPC2L-211ENST00000565504 HRCP23327 699 aa21.32■■□□□ 1
TRAPPC2L-211ENST00000565504 PCGF6Q9BYE7 350 aa21.17■□□□□ 0.98
TRAPPC2L-211ENST00000565504 DCAF1Q9Y4B6 1507 aa20.94■□□□□ 0.94
TRAPPC2L-211ENST00000565504 LOC105371045A0A1W2PR82 267 aa20.87■□□□□ 0.93
TRAPPC2L-211ENST00000565504 PPARGC1BQ86YN6 1023 aaKnown RBP20.84■□□□□ 0.93
TRAPPC2L-211ENST00000565504 TRIM26Q12899 539 aaPredicted RBP20.67■□□□□ 0.9
TRAPPC2L-211ENST00000565504 ABCC9O60706 1549 aa20.5■□□□□ 0.87
TRAPPC2L-211ENST00000565504 TRIM41Q8WV44 630 aa20.44■□□□□ 0.86
TRAPPC2L-211ENST00000565504 RSF1Q96T23 1441 aaPredicted RBP20.41■□□□□ 0.86
TRAPPC2L-211ENST00000565504 ZEB1P37275 1124 aaPredicted RBP20.38■□□□□ 0.85
TRAPPC2L-211ENST00000565504 SCRIBQ14160 1630 aa20.35■□□□□ 0.85
TRAPPC2L-211ENST00000565504 FAM9AQ8IZU1 332 aaPredicted RBP20.32■□□□□ 0.84
TRAPPC2L-211ENST00000565504 RB1CC1Q8TDY2 1594 aa20.21■□□□□ 0.83
TRAPPC2L-211ENST00000565504 EHMT2Q96KQ7 1210 aa20.18■□□□□ 0.82
TRAPPC2L-211ENST00000565504 CECR2Q9BXF3 1484 aa19.99■□□□□ 0.79
TRAPPC2L-211ENST00000565504 MROH2BQ7Z745 1585 aa19.93■□□□□ 0.78
TRAPPC2L-211ENST00000565504 NACADO15069 1562 aa19.91■□□□□ 0.78
TRAPPC2L-211ENST00000565504 PELP1Q8IZL8 1130 aaKnown RBP19.86■□□□□ 0.77
TRAPPC2L-211ENST00000565504 WIZO95785 1651 aa19.83■□□□□ 0.77
TRAPPC2L-211ENST00000565504 SCAF1Q9H7N4 1312 aaKnown RBP19.83■□□□□ 0.76
TRAPPC2L-211ENST00000565504 CCER1Q8TC90 406 aaPredicted RBP19.8■□□□□ 0.76
TRAPPC2L-211ENST00000565504 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.79■□□□□ 0.76
TRAPPC2L-211ENST00000565504 BAZ1AQ9NRL2 1556 aaPredicted RBP19.7■□□□□ 0.74
TRAPPC2L-211ENST00000565504 TTBK1Q5TCY1 1321 aaPredicted RBP19.6■□□□□ 0.73
TRAPPC2L-211ENST00000565504 EIF4G1Q04637 1599 aaKnown RBP19.59■□□□□ 0.73
TRAPPC2L-211ENST00000565504 ACIN1Q9UKV3 1341 aaKnown RBP19.58■□□□□ 0.72
TRAPPC2L-211ENST00000565504 DIEXFQ68CQ4 756 aaKnown RBP19.56■□□□□ 0.72
TRAPPC2L-211ENST00000565504 CCDC88BA6NC98 1476 aa19.53■□□□□ 0.72
TRAPPC2L-211ENST00000565504 ABCC8Q09428 1581 aa19.53■□□□□ 0.72
TRAPPC2L-211ENST00000565504 WRNQ14191 1432 aaPredicted RBP eCLIP19.53■□□□□ 0.72
TRAPPC2L-211ENST00000565504 NEUROD1Q13562 356 aa19.51■□□□□ 0.71
TRAPPC2L-211ENST00000565504 CEP162Q5TB80 1403 aa19.51■□□□□ 0.71
TRAPPC2L-211ENST00000565504 TOP2AP11388 1531 aaKnown RBP19.51■□□□□ 0.71
TRAPPC2L-211ENST00000565504 CENPBP07199 599 aaPredicted RBP19.49■□□□□ 0.71
TRAPPC2L-211ENST00000565504 UBTFP17480 764 aaKnown RBP19.46■□□□□ 0.71
TRAPPC2L-211ENST00000565504 TNIKQ9UKE5 1360 aa19.46■□□□□ 0.71
TRAPPC2L-211ENST00000565504 SOGA1O94964 1423 aa19.45■□□□□ 0.7
TRAPPC2L-211ENST00000565504 CSRNP3Q8WYN3 585 aa19.44■□□□□ 0.7
TRAPPC2L-211ENST00000565504 SMARCA4P51532 1647 aa19.42■□□□□ 0.7
TRAPPC2L-211ENST00000565504 SMARCA2P51531 1590 aa19.41■□□□□ 0.7
TRAPPC2L-211ENST00000565504 EEA1Q15075 1411 aa19.39■□□□□ 0.69
TRAPPC2L-211ENST00000565504 GTF3C3Q9Y5Q9 886 aa19.38■□□□□ 0.69
TRAPPC2L-211ENST00000565504 ZNF316A6NFI3 1004 aaPredicted RBP19.32■□□□□ 0.68
TRAPPC2L-211ENST00000565504 RUSC2Q8N2Y8 1516 aa19.31■□□□□ 0.68
TRAPPC2L-211ENST00000565504 GOLGA3Q08378 1498 aa19.28■□□□□ 0.68
TRAPPC2L-211ENST00000565504 HNRNPUL2Q1KMD3 747 aaKnown RBP19.2■□□□□ 0.66
TRAPPC2L-211ENST00000565504 UNC13AQ9UPW8 1703 aa19.16■□□□□ 0.66
TRAPPC2L-211ENST00000565504 YTHDC1Q96MU7 727 aaKnown RBP19.16■□□□□ 0.66
TRAPPC2L-211ENST00000565504 CEP164Q9UPV0 1460 aa19.14■□□□□ 0.65
TRAPPC2L-211ENST00000565504 APLP2Q06481 763 aa19.14■□□□□ 0.65
TRAPPC2L-211ENST00000565504 PABPN1Q86U42 306 aaKnown RBP eCLIP19.14■□□□□ 0.65
TRAPPC2L-211ENST00000565504 CLIP1P30622 1438 aa19.1■□□□□ 0.65
TRAPPC2L-211ENST00000565504 MIER1Q8N108 512 aa19.07■□□□□ 0.64
TRAPPC2L-211ENST00000565504 KIF21BO75037 1637 aa19.04■□□□□ 0.64
TRAPPC2L-211ENST00000565504 VPS8Q8N3P4 1428 aa19.03■□□□□ 0.64
TRAPPC2L-211ENST00000565504 RANGAP1P46060 587 aaPredicted RBP19.03■□□□□ 0.64
TRAPPC2L-211ENST00000565504 SYNJ1O43426 1573 aa19.02■□□□□ 0.64
TRAPPC2L-211ENST00000565504 PEG3Q9GZU2 1588 aa18.98■□□□□ 0.63
TRAPPC2L-211ENST00000565504 BAZ1BQ9UIG0 1483 aaKnown RBP18.96■□□□□ 0.63
TRAPPC2L-211ENST00000565504 MYT1Q01538 1121 aa18.96■□□□□ 0.63
TRAPPC2L-211ENST00000565504 RAPGEF2Q9Y4G8 1499 aa18.94■□□□□ 0.62
TRAPPC2L-211ENST00000565504 BICRAQ9NZM4 1560 aa18.94■□□□□ 0.62
TRAPPC2L-211ENST00000565504 ATAD2BQ9ULI0 1458 aa18.89■□□□□ 0.61
TRAPPC2L-211ENST00000565504 CLSPNQ9HAW4 1339 aa18.83■□□□□ 0.6
TRAPPC2L-211ENST00000565504 DHX57Q6P158 1386 aaKnown RBP18.76■□□□□ 0.59
TRAPPC2L-211ENST00000565504 TOP2BQ02880 1626 aa18.76■□□□□ 0.59
TRAPPC2L-211ENST00000565504 KANK4Q5T7N3 995 aaPredicted RBP18.72■□□□□ 0.59
TRAPPC2L-211ENST00000565504 ERICH3Q5RHP9 1530 aa18.7■□□□□ 0.58
TRAPPC2L-211ENST00000565504 PRXQ9BXM0 1461 aa18.69■□□□□ 0.58
TRAPPC2L-211ENST00000565504 ARAP1Q96P48 1450 aa18.68■□□□□ 0.58
TRAPPC2L-211ENST00000565504 BIVM-ERCC5R4GMW8 1640 aa18.64■□□□□ 0.58
TRAPPC2L-211ENST00000565504 RRBP1Q9P2E9 1410 aaKnown RBP18.61■□□□□ 0.57
TRAPPC2L-211ENST00000565504 ITGAEP38570 1179 aa18.61■□□□□ 0.57
TRAPPC2L-211ENST00000565504 KIF27Q86VH2 1401 aa18.6■□□□□ 0.57
TRAPPC2L-211ENST00000565504 CCNB3Q8WWL7 1395 aa18.58■□□□□ 0.56
TRAPPC2L-211ENST00000565504 SUPT16HQ9Y5B9 1047 aaKnown RBP18.57■□□□□ 0.56
TRAPPC2L-211ENST00000565504 CUX1P39880 1505 aa18.52■□□□□ 0.56
TRAPPC2L-211ENST00000565504 CUX2O14529 1486 aa18.51■□□□□ 0.55
TRAPPC2L-211ENST00000565504 ARHGAP35Q9NRY4 1499 aa18.49■□□□□ 0.55
TRAPPC2L-211ENST00000565504 NCAPD3P42695 1498 aa18.45■□□□□ 0.54
TRAPPC2L-211ENST00000565504 RAB3GAP2Q9H2M9 1393 aa18.45■□□□□ 0.54
TRAPPC2L-211ENST00000565504 HMGXB3Q12766 1538 aa18.43■□□□□ 0.54
TRAPPC2L-211ENST00000565504 CFTRP13569 1480 aa18.4■□□□□ 0.54
TRAPPC2L-211ENST00000565504 KCNH8Q96L42 1107 aa18.37■□□□□ 0.53
TRAPPC2L-211ENST00000565504 SETD5Q9C0A6 1442 aa18.37■□□□□ 0.53
TRAPPC2L-211ENST00000565504 FAM50AQ14320 339 aaKnown RBP18.36■□□□□ 0.53
TRAPPC2L-211ENST00000565504 IGF1RP08069 1367 aa18.35■□□□□ 0.53
TRAPPC2L-211ENST00000565504 MAPKBP1O60336 1514 aa18.34■□□□□ 0.53
TRAPPC2L-211ENST00000565504 DDX10Q13206 875 aaKnown RBP18.34■□□□□ 0.53
TRAPPC2L-211ENST00000565504 TIAM1Q13009 1591 aa18.33■□□□□ 0.52
TRAPPC2L-211ENST00000565504 TSHZ2Q9NRE2 1034 aa18.33■□□□□ 0.52
TRAPPC2L-211ENST00000565504 SIN3AQ96ST3 1273 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms