RNA–Protein interactions for RNA: ENST00000498035.5

HM13-224, Transcript of histocompatibility minor 13, humanhuman

TSL 2 BASIC

Gene HM13, Length 3,932 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HM13-224ENST00000498035 SLC24A1O60721 1099 aa16.94■□□□□ 0.3
HM13-224ENST00000498035 NISCHQ9Y2I1 1504 aa16.26■□□□□ 0.19
HM13-224ENST00000498035 MYT1Q01538 1121 aa15.75■□□□□ 0.11
HM13-224ENST00000498035 EHMT2Q96KQ7 1210 aa15.57■□□□□ 0.08
HM13-224ENST00000498035 PELP1Q8IZL8 1130 aaKnown RBP15.56■□□□□ 0.08
HM13-224ENST00000498035 DAXXQ9UER7 740 aaPredicted RBP15.49■□□□□ 0.07
HM13-224ENST00000498035 PRKCSHP14314 528 aaPredicted RBP15.46■□□□□ 0.07
HM13-224ENST00000498035 TTBK1Q5TCY1 1321 aaPredicted RBP15.43■□□□□ 0.06
HM13-224ENST00000498035 ERICH6Q7L0X2 663 aa15.31■□□□□ 0.04
HM13-224ENST00000498035 PLPPR3Q6T4P5 718 aa15.23■□□□□ 0.03
HM13-224ENST00000498035 APLP2Q06481 763 aa15.1■□□□□ 0.01
HM13-224ENST00000498035 RTN4Q9NQC3 1192 aaKnown RBP15.07■□□□□ 0
HM13-224ENST00000498035 DCAF8L2P0C7V8 631 aa15.03■□□□□ -0
HM13-224ENST00000498035 NCBP3Q53F19 620 aaKnown RBP14.89□□□□□ -0.03
HM13-224ENST00000498035 EIF5BO60841 1220 aaKnown RBP14.61□□□□□ -0.07
HM13-224ENST00000498035 SHROOM4Q9ULL8 1493 aa14.59□□□□□ -0.07
HM13-224ENST00000498035 RANGAP1P46060 587 aaPredicted RBP14.51□□□□□ -0.09
HM13-224ENST00000498035 SUPT5HO00267 1087 aaKnown RBP14.49□□□□□ -0.09
HM13-224ENST00000498035 TIMELESSQ9UNS1 1208 aa14.48□□□□□ -0.09
HM13-224ENST00000498035 AMER1Q5JTC6 1135 aaPredicted RBP14.38□□□□□ -0.11
HM13-224ENST00000498035 CHIC1Q5VXU3 224 aa14.37□□□□□ -0.11
HM13-224ENST00000498035 ARXQ96QS3 562 aa14.37□□□□□ -0.11
HM13-224ENST00000498035 TULP1O00294 542 aaPredicted RBP14.35□□□□□ -0.11
HM13-224ENST00000498035 KLHL34Q8N239 644 aa14.29□□□□□ -0.12
HM13-224ENST00000498035 KCNA4P22459 653 aa14.25□□□□□ -0.13
HM13-224ENST00000498035 PLEKHG5O94827 1062 aa14.24□□□□□ -0.13
HM13-224ENST00000498035 BCL11AQ9H165 835 aa14.16□□□□□ -0.14
HM13-224ENST00000498035 PODXL2Q9NZ53 605 aa14.13□□□□□ -0.15
HM13-224ENST00000498035 HOMEZQ8IX15 550 aa14.07□□□□□ -0.16
HM13-224ENST00000498035 TAOK2Q9UL54 1235 aa13.99□□□□□ -0.17
HM13-224ENST00000498035 CSRNP3Q8WYN3 585 aa13.96□□□□□ -0.18
HM13-224ENST00000498035 TPRNQ4KMQ1 711 aa13.95□□□□□ -0.18
HM13-224ENST00000498035 FAM9AQ8IZU1 332 aaPredicted RBP13.82□□□□□ -0.2
HM13-224ENST00000498035 NPM2Q86SE8 214 aaKnown RBP13.74□□□□□ -0.21
HM13-224ENST00000498035 C14orf37Q86TY3 774 aa13.72□□□□□ -0.21
HM13-224ENST00000498035 BCANQ96GW7 911 aa13.7□□□□□ -0.22
HM13-224ENST00000498035 AEBP2Q6ZN18 517 aaPredicted RBP13.67□□□□□ -0.22
HM13-224ENST00000498035 GTF3C3Q9Y5Q9 886 aa13.63□□□□□ -0.23
HM13-224ENST00000498035 CCDC180Q9P1Z9 1646 aa13.58□□□□□ -0.24
HM13-224ENST00000498035 ZCCHC6Q5VYS8 1495 aaKnown RBP13.58□□□□□ -0.24
HM13-224ENST00000498035 ABCC9O60706 1549 aa13.55□□□□□ -0.24
HM13-224ENST00000498035 HAP1P54257 671 aaPredicted RBP13.53□□□□□ -0.24
HM13-224ENST00000498035 PDIA4P13667 645 aaKnown RBP13.5□□□□□ -0.25
HM13-224ENST00000498035 TRIM41Q8WV44 630 aa13.46□□□□□ -0.26
HM13-224ENST00000498035 LOC105371045A0A1W2PR82 267 aa13.36□□□□□ -0.27
HM13-224ENST00000498035 TRIM26Q12899 539 aaPredicted RBP13.35□□□□□ -0.27
HM13-224ENST00000498035 PDE4CQ08493 712 aa13.34□□□□□ -0.27
HM13-224ENST00000498035 PLCB2Q00722 1185 aa13.33□□□□□ -0.28
HM13-224ENST00000498035 PCGF6Q9BYE7 350 aa13.32□□□□□ -0.28
HM13-224ENST00000498035 UBE2Q2Q8WVN8 375 aa13.3□□□□□ -0.28
HM13-224ENST00000498035 CHMP4AQ9BY43 222 aa13.29□□□□□ -0.28
HM13-224ENST00000498035 DHX37Q8IY37 1157 aaKnown RBP13.27□□□□□ -0.29
HM13-224ENST00000498035 TMEM132AQ24JP5 1023 aa13.23□□□□□ -0.29
HM13-224ENST00000498035 PKNOX2Q96KN3 472 aa13.22□□□□□ -0.29
HM13-224ENST00000498035 NEFLP07196 543 aa13.21□□□□□ -0.29
HM13-224ENST00000498035 PABPN1Q86U42 306 aaKnown RBP eCLIP13.2□□□□□ -0.3
HM13-224ENST00000498035 FBXO3Q9UK99 471 aa13.19□□□□□ -0.3
HM13-224ENST00000498035 SCRIBQ14160 1630 aa13.18□□□□□ -0.3
HM13-224ENST00000498035 PHF23Q9BUL5 403 aaPredicted RBP13.17□□□□□ -0.3
HM13-224ENST00000498035 UBTFP17480 764 aaKnown RBP13.15□□□□□ -0.3
HM13-224ENST00000498035 SLC4A1APQ9BWU0 796 aaKnown RBP13.13□□□□□ -0.31
HM13-224ENST00000498035 CDK11BP21127 795 aaKnown RBP13.11□□□□□ -0.31
HM13-224ENST00000498035 CDK11AQ9UQ88 783 aaPredicted RBP13.11□□□□□ -0.31
HM13-224ENST00000498035 CENPBP07199 599 aaPredicted RBP13.09□□□□□ -0.31
HM13-224ENST00000498035 HRCP23327 699 aa13.08□□□□□ -0.32
HM13-224ENST00000498035 DCAF1Q9Y4B6 1507 aa13.07□□□□□ -0.32
HM13-224ENST00000498035 BCL11BQ9C0K0 894 aaPredicted RBP13.06□□□□□ -0.32
HM13-224ENST00000498035 SAMD1Q6SPF0 538 aaPredicted RBP13.04□□□□□ -0.32
HM13-224ENST00000498035 POLR3GLQ9BT43 218 aa13.02□□□□□ -0.33
HM13-224ENST00000498035 TAF7LQ5H9L4 462 aa13.01□□□□□ -0.33
HM13-224ENST00000498035 BRD2P25440 801 aaKnown RBP12.99□□□□□ -0.33
HM13-224ENST00000498035 ANO8Q9HCE9 1232 aaPredicted RBP12.99□□□□□ -0.33
HM13-224ENST00000498035 PPARGC1BQ86YN6 1023 aaKnown RBP12.97□□□□□ -0.33
HM13-224ENST00000498035 CFAP44Q96MT7 982 aa12.97□□□□□ -0.33
HM13-224ENST00000498035 CCDC136Q96JN2 1154 aa12.96□□□□□ -0.34
HM13-224ENST00000498035 NACADO15069 1562 aa12.94□□□□□ -0.34
HM13-224ENST00000498035 RSF1Q96T23 1441 aaPredicted RBP12.92□□□□□ -0.34
HM13-224ENST00000498035 RB1CC1Q8TDY2 1594 aa12.9□□□□□ -0.35
HM13-224ENST00000498035 SCAF1Q9H7N4 1312 aaKnown RBP12.85□□□□□ -0.35
HM13-224ENST00000498035 A0A0U1RQG5 324 aaPredicted RBP12.84□□□□□ -0.35
HM13-224ENST00000498035 UNC13AQ9UPW8 1703 aa12.84□□□□□ -0.35
HM13-224ENST00000498035 IGSF3O75054 1194 aa12.83□□□□□ -0.36
HM13-224ENST00000498035 FBLN2P98095 1184 aa12.83□□□□□ -0.36
HM13-224ENST00000498035 CNKSR2Q8WXI2 1034 aa12.83□□□□□ -0.36
HM13-224ENST00000498035 PPP6R1Q9UPN7 881 aa12.82□□□□□ -0.36
HM13-224ENST00000498035 CCER1Q8TC90 406 aaPredicted RBP12.82□□□□□ -0.36
HM13-224ENST00000498035 KDM2AQ9Y2K7 1162 aa12.82□□□□□ -0.36
HM13-224ENST00000498035 ZEB1P37275 1124 aaPredicted RBP12.82□□□□□ -0.36
HM13-224ENST00000498035 IRX6P78412 446 aaPredicted RBP12.81□□□□□ -0.36
HM13-224ENST00000498035 FGD1P98174 961 aa12.79□□□□□ -0.36
HM13-224ENST00000498035 MYO15BQ96JP2 1530 aa12.78□□□□□ -0.36
HM13-224ENST00000498035 CECR2Q9BXF3 1484 aa12.77□□□□□ -0.36
HM13-224ENST00000498035 ATP1B4Q9UN42 357 aaPredicted RBP12.74□□□□□ -0.37
HM13-224ENST00000498035 PAXIP1Q6ZW49 1069 aaPredicted RBP12.74□□□□□ -0.37
HM13-224ENST00000498035 EIF4G1Q04637 1599 aaKnown RBP12.73□□□□□ -0.37
HM13-224ENST00000498035 VSIG10Q8N0Z9 540 aa12.72□□□□□ -0.37
HM13-224ENST00000498035 ARID3AQ99856 593 aa12.71□□□□□ -0.37
HM13-224ENST00000498035 HSP90B1P14625 803 aaKnown RBP12.7□□□□□ -0.38
HM13-224ENST00000498035 FKBP8Q14318 412 aa12.69□□□□□ -0.38
HM13-224ENST00000498035 MROH2BQ7Z745 1585 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms