RNA–Protein interactions for RNA: ENST00000235453.8

DENND1B-201, Transcript of DENN domain containing 1B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DENND1B, Length 2,195 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND1B-201ENST00000235453 NISCHQ9Y2I1 1504 aa19.28■□□□□ 0.68
DENND1B-201ENST00000235453 PELP1Q8IZL8 1130 aaKnown RBP17.68■□□□□ 0.42
DENND1B-201ENST00000235453 MYT1Q01538 1121 aa17.3■□□□□ 0.36
DENND1B-201ENST00000235453 HRCP23327 699 aa17.11■□□□□ 0.33
DENND1B-201ENST00000235453 TTBK1Q5TCY1 1321 aaPredicted RBP16.53■□□□□ 0.24
DENND1B-201ENST00000235453 CCDC180Q9P1Z9 1646 aa16.5■□□□□ 0.23
DENND1B-201ENST00000235453 SCAF1Q9H7N4 1312 aaKnown RBP16.36■□□□□ 0.21
DENND1B-201ENST00000235453 SHROOM4Q9ULL8 1493 aa16.32■□□□□ 0.2
DENND1B-201ENST00000235453 PPARGC1BQ86YN6 1023 aaKnown RBP16.32■□□□□ 0.2
DENND1B-201ENST00000235453 ZCCHC6Q5VYS8 1495 aaKnown RBP16.25■□□□□ 0.19
DENND1B-201ENST00000235453 SLC24A1O60721 1099 aa16.19■□□□□ 0.18
DENND1B-201ENST00000235453 PCGF6Q9BYE7 350 aa16.16■□□□□ 0.18
DENND1B-201ENST00000235453 DCAF8L2P0C7V8 631 aa16.11■□□□□ 0.17
DENND1B-201ENST00000235453 DCAF1Q9Y4B6 1507 aa16.1■□□□□ 0.17
DENND1B-201ENST00000235453 MYO15BQ96JP2 1530 aa16.06■□□□□ 0.16
DENND1B-201ENST00000235453 ZEB1P37275 1124 aaPredicted RBP16.04■□□□□ 0.16
DENND1B-201ENST00000235453 ACIN1Q9UKV3 1341 aaKnown RBP15.9■□□□□ 0.14
DENND1B-201ENST00000235453 SUPT5HO00267 1087 aaKnown RBP15.83■□□□□ 0.13
DENND1B-201ENST00000235453 TRIM26Q12899 539 aaPredicted RBP15.79■□□□□ 0.12
DENND1B-201ENST00000235453 AEBP2Q6ZN18 517 aaPredicted RBP15.71■□□□□ 0.11
DENND1B-201ENST00000235453 CHIC1Q5VXU3 224 aa15.7■□□□□ 0.1
DENND1B-201ENST00000235453 CENPBP07199 599 aaPredicted RBP15.69■□□□□ 0.1
DENND1B-201ENST00000235453 NEUROD1Q13562 356 aa15.68■□□□□ 0.1
DENND1B-201ENST00000235453 BCL11AQ9H165 835 aa15.64■□□□□ 0.09
DENND1B-201ENST00000235453 GTF3C3Q9Y5Q9 886 aa15.64■□□□□ 0.09
DENND1B-201ENST00000235453 ABCC9O60706 1549 aa15.6■□□□□ 0.09
DENND1B-201ENST00000235453 SCRIBQ14160 1630 aa15.5■□□□□ 0.07
DENND1B-201ENST00000235453 PRKCSHP14314 528 aaPredicted RBP15.49■□□□□ 0.07
DENND1B-201ENST00000235453 FAM9AQ8IZU1 332 aaPredicted RBP15.44■□□□□ 0.06
DENND1B-201ENST00000235453 ERICH6Q7L0X2 663 aa15.43■□□□□ 0.06
DENND1B-201ENST00000235453 ANP32EQ9BTT0 268 aa15.36■□□□□ 0.05
DENND1B-201ENST00000235453 APLP2Q06481 763 aa15.31■□□□□ 0.04
DENND1B-201ENST00000235453 NACADO15069 1562 aa15.3■□□□□ 0.04
DENND1B-201ENST00000235453 CLSPNQ9HAW4 1339 aa15.25■□□□□ 0.03
DENND1B-201ENST00000235453 DIEXFQ68CQ4 756 aaKnown RBP15.22■□□□□ 0.03
DENND1B-201ENST00000235453 DAXXQ9UER7 740 aaPredicted RBP15.2■□□□□ 0.02
DENND1B-201ENST00000235453 RSF1Q96T23 1441 aaPredicted RBP15.15■□□□□ 0.02
DENND1B-201ENST00000235453 LOC105371045A0A1W2PR82 267 aa15.13■□□□□ 0.01
DENND1B-201ENST00000235453 RB1CC1Q8TDY2 1594 aa15.13■□□□□ 0.01
DENND1B-201ENST00000235453 CECR2Q9BXF3 1484 aa15.11■□□□□ 0.01
DENND1B-201ENST00000235453 TRIM41Q8WV44 630 aa15.08■□□□□ 0.01
DENND1B-201ENST00000235453 CSRNP3Q8WYN3 585 aa15.05■□□□□ -0
DENND1B-201ENST00000235453 UNC13AQ9UPW8 1703 aa15.02□□□□□ -0.01
DENND1B-201ENST00000235453 MROH2BQ7Z745 1585 aa15.01□□□□□ -0.01
DENND1B-201ENST00000235453 TSHZ2Q9NRE2 1034 aa14.96□□□□□ -0.01
DENND1B-201ENST00000235453 WIZO95785 1651 aa14.95□□□□□ -0.02
DENND1B-201ENST00000235453 ZNF316A6NFI3 1004 aaPredicted RBP14.88□□□□□ -0.03
DENND1B-201ENST00000235453 PABPN1Q86U42 306 aaKnown RBP eCLIP14.87□□□□□ -0.03
DENND1B-201ENST00000235453 SUPT16HQ9Y5B9 1047 aaKnown RBP14.85□□□□□ -0.03
DENND1B-201ENST00000235453 CCER1Q8TC90 406 aaPredicted RBP14.84□□□□□ -0.03
DENND1B-201ENST00000235453 BAZ1AQ9NRL2 1556 aaPredicted RBP14.8□□□□□ -0.04
DENND1B-201ENST00000235453 BICRAQ9NZM4 1560 aa14.8□□□□□ -0.04
DENND1B-201ENST00000235453 MYT1LQ9UL68 1186 aa14.78□□□□□ -0.04
DENND1B-201ENST00000235453 SMARCA4P51532 1647 aa14.76□□□□□ -0.05
DENND1B-201ENST00000235453 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.74□□□□□ -0.05
DENND1B-201ENST00000235453 MIER1Q8N108 512 aa14.71□□□□□ -0.05
DENND1B-201ENST00000235453 YTHDC1Q96MU7 727 aaKnown RBP14.71□□□□□ -0.05
DENND1B-201ENST00000235453 TOP2AP11388 1531 aaKnown RBP14.63□□□□□ -0.07
DENND1B-201ENST00000235453 ERICH6BQ5W0A0 696 aa14.61□□□□□ -0.07
DENND1B-201ENST00000235453 EHMT2Q96KQ7 1210 aa14.61□□□□□ -0.07
DENND1B-201ENST00000235453 CCDC88BA6NC98 1476 aa14.6□□□□□ -0.07
DENND1B-201ENST00000235453 EIF4G1Q04637 1599 aaKnown RBP14.59□□□□□ -0.07
DENND1B-201ENST00000235453 SMARCA2P51531 1590 aa14.58□□□□□ -0.08
DENND1B-201ENST00000235453 UBE2Q2Q8WVN8 375 aa14.57□□□□□ -0.08
DENND1B-201ENST00000235453 RBM19Q9Y4C8 960 aaKnown RBP14.53□□□□□ -0.08
DENND1B-201ENST00000235453 ABCC8Q09428 1581 aa14.52□□□□□ -0.08
DENND1B-201ENST00000235453 FANCIQ9NVI1 1328 aa14.51□□□□□ -0.09
DENND1B-201ENST00000235453 WRNQ14191 1432 aaPredicted RBP eCLIP14.5□□□□□ -0.09
DENND1B-201ENST00000235453 NCBP3Q53F19 620 aaKnown RBP14.49□□□□□ -0.09
DENND1B-201ENST00000235453 ANO8Q9HCE9 1232 aaPredicted RBP14.47□□□□□ -0.09
DENND1B-201ENST00000235453 PEG3Q9GZU2 1588 aa14.45□□□□□ -0.1
DENND1B-201ENST00000235453 MSH5O43196 834 aa14.43□□□□□ -0.1
DENND1B-201ENST00000235453 ATAD2BQ9ULI0 1458 aa14.43□□□□□ -0.1
DENND1B-201ENST00000235453 DEKP35659 375 aaKnown RBP14.37□□□□□ -0.11
DENND1B-201ENST00000235453 BAZ1BQ9UIG0 1483 aaKnown RBP14.37□□□□□ -0.11
DENND1B-201ENST00000235453 SOGA1O94964 1423 aa14.3□□□□□ -0.12
DENND1B-201ENST00000235453 SALL2Q9Y467 1007 aaPredicted RBP14.28□□□□□ -0.12
DENND1B-201ENST00000235453 RUSC2Q8N2Y8 1516 aa14.28□□□□□ -0.12
DENND1B-201ENST00000235453 EIF5BO60841 1220 aaKnown RBP14.23□□□□□ -0.13
DENND1B-201ENST00000235453 SYNJ1O43426 1573 aa14.23□□□□□ -0.13
DENND1B-201ENST00000235453 FKBP8Q14318 412 aa14.21□□□□□ -0.13
DENND1B-201ENST00000235453 ARXQ96QS3 562 aa14.18□□□□□ -0.14
DENND1B-201ENST00000235453 NEFLP07196 543 aa14.17□□□□□ -0.14
DENND1B-201ENST00000235453 NCAPD3P42695 1498 aa14.16□□□□□ -0.14
DENND1B-201ENST00000235453 HMGXB3Q12766 1538 aa14.14□□□□□ -0.15
DENND1B-201ENST00000235453 BCANQ96GW7 911 aa14.12□□□□□ -0.15
DENND1B-201ENST00000235453 CDK11AQ9UQ88 783 aaPredicted RBP14.08□□□□□ -0.16
DENND1B-201ENST00000235453 PKNOX2Q96KN3 472 aa14.07□□□□□ -0.16
DENND1B-201ENST00000235453 UBTFP17480 764 aaKnown RBP14.07□□□□□ -0.16
DENND1B-201ENST00000235453 CEP162Q5TB80 1403 aa14.06□□□□□ -0.16
DENND1B-201ENST00000235453 EEA1Q15075 1411 aa14.05□□□□□ -0.16
DENND1B-201ENST00000235453 C11orf95C9JLR9 678 aaPredicted RBP14.05□□□□□ -0.16
DENND1B-201ENST00000235453 CCDC136Q96JN2 1154 aa14.04□□□□□ -0.16
DENND1B-201ENST00000235453 TOP2BQ02880 1626 aa14.03□□□□□ -0.16
DENND1B-201ENST00000235453 CC2D2AQ9P2K1 1620 aa14.03□□□□□ -0.16
DENND1B-201ENST00000235453 TNIKQ9UKE5 1360 aa14.03□□□□□ -0.16
DENND1B-201ENST00000235453 NOP58Q9Y2X3 529 aaKnown RBP14□□□□□ -0.17
DENND1B-201ENST00000235453 RTN4Q9NQC3 1192 aaKnown RBP14□□□□□ -0.17
DENND1B-201ENST00000235453 GOLGA3Q08378 1498 aa14□□□□□ -0.17
DENND1B-201ENST00000235453 CUX1P39880 1505 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms