RNA–Protein interactions for RNA: ENST00000585316.2

ZNF488-201, Transcript of zinc finger protein 488, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ZNF488, Length 3,496 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF488-201ENST00000585316 NISCHQ9Y2I1 1504 aa24.12■■□□□ 1.45
ZNF488-201ENST00000585316 DCAF8L2P0C7V8 631 aa21.74■■□□□ 1.07
ZNF488-201ENST00000585316 ABCC9O60706 1549 aa20.91■□□□□ 0.94
ZNF488-201ENST00000585316 SHROOM4Q9ULL8 1493 aa20.91■□□□□ 0.94
ZNF488-201ENST00000585316 CCDC180Q9P1Z9 1646 aa20.54■□□□□ 0.88
ZNF488-201ENST00000585316 SUPT5HO00267 1087 aaKnown RBP20.11■□□□□ 0.81
ZNF488-201ENST00000585316 PABPN1Q86U42 306 aaKnown RBP eCLIP20.1■□□□□ 0.81
ZNF488-201ENST00000585316 ZCCHC6Q5VYS8 1495 aaKnown RBP20.08■□□□□ 0.8
ZNF488-201ENST00000585316 SCRIBQ14160 1630 aa19.81■□□□□ 0.76
ZNF488-201ENST00000585316 RB1CC1Q8TDY2 1594 aa19.54■□□□□ 0.72
ZNF488-201ENST00000585316 NACADO15069 1562 aa19.48■□□□□ 0.71
ZNF488-201ENST00000585316 DCAF1Q9Y4B6 1507 aa19.33■□□□□ 0.69
ZNF488-201ENST00000585316 CECR2Q9BXF3 1484 aa19.19■□□□□ 0.66
ZNF488-201ENST00000585316 MYO15BQ96JP2 1530 aa19.06■□□□□ 0.64
ZNF488-201ENST00000585316 EHMT2Q96KQ7 1210 aa19.06■□□□□ 0.64
ZNF488-201ENST00000585316 UNC13AQ9UPW8 1703 aa18.95■□□□□ 0.62
ZNF488-201ENST00000585316 PPARGC1BQ86YN6 1023 aaKnown RBP18.9■□□□□ 0.62
ZNF488-201ENST00000585316 BICRAQ9NZM4 1560 aa18.89■□□□□ 0.61
ZNF488-201ENST00000585316 RSF1Q96T23 1441 aaPredicted RBP18.87■□□□□ 0.61
ZNF488-201ENST00000585316 MROH2BQ7Z745 1585 aa18.87■□□□□ 0.61
ZNF488-201ENST00000585316 DNAJC5BQ9UF47 199 aa18.82■□□□□ 0.6
ZNF488-201ENST00000585316 FAM9AQ8IZU1 332 aaPredicted RBP18.8■□□□□ 0.6
ZNF488-201ENST00000585316 PCGF6Q9BYE7 350 aa18.7■□□□□ 0.58
ZNF488-201ENST00000585316 WIZO95785 1651 aa18.69■□□□□ 0.58
ZNF488-201ENST00000585316 HRCP23327 699 aa18.65■□□□□ 0.58
ZNF488-201ENST00000585316 BAZ1AQ9NRL2 1556 aaPredicted RBP18.6■□□□□ 0.57
ZNF488-201ENST00000585316 TRIM41Q8WV44 630 aa18.55■□□□□ 0.56
ZNF488-201ENST00000585316 SMARCA4P51532 1647 aa18.53■□□□□ 0.56
ZNF488-201ENST00000585316 EIF4G1Q04637 1599 aaKnown RBP18.53■□□□□ 0.56
ZNF488-201ENST00000585316 CHIC1Q5VXU3 224 aa18.5■□□□□ 0.55
ZNF488-201ENST00000585316 BAZ1BQ9UIG0 1483 aaKnown RBP18.5■□□□□ 0.55
ZNF488-201ENST00000585316 ATAD2BQ9ULI0 1458 aa18.45■□□□□ 0.54
ZNF488-201ENST00000585316 RANGAP1P46060 587 aaPredicted RBP18.42■□□□□ 0.54
ZNF488-201ENST00000585316 CC2D2AQ9P2K1 1620 aa18.39■□□□□ 0.53
ZNF488-201ENST00000585316 CCDC88BA6NC98 1476 aa18.33■□□□□ 0.53
ZNF488-201ENST00000585316 LOC105371045A0A1W2PR82 267 aa18.3■□□□□ 0.52
ZNF488-201ENST00000585316 SMARCA2P51531 1590 aa18.24■□□□□ 0.51
ZNF488-201ENST00000585316 TOP2AP11388 1531 aaKnown RBP18.18■□□□□ 0.5
ZNF488-201ENST00000585316 NESP48681 1621 aa18.18■□□□□ 0.5
ZNF488-201ENST00000585316 PELP1Q8IZL8 1130 aaKnown RBP18.17■□□□□ 0.5
ZNF488-201ENST00000585316 ABCC8Q09428 1581 aa18.13■□□□□ 0.49
ZNF488-201ENST00000585316 NCAPD3P42695 1498 aa18.13■□□□□ 0.49
ZNF488-201ENST00000585316 TTBK1Q5TCY1 1321 aaPredicted RBP18.08■□□□□ 0.48
ZNF488-201ENST00000585316 UBTFP17480 764 aaKnown RBP18■□□□□ 0.47
ZNF488-201ENST00000585316 SCAF1Q9H7N4 1312 aaKnown RBP17.98■□□□□ 0.47
ZNF488-201ENST00000585316 CADPSQ9ULU8 1353 aa17.97■□□□□ 0.47
ZNF488-201ENST00000585316 ERCC6Q03468 1493 aa17.95■□□□□ 0.46
ZNF488-201ENST00000585316 FBLN2P98095 1184 aa17.95■□□□□ 0.46
ZNF488-201ENST00000585316 WRNQ14191 1432 aaPredicted RBP eCLIP17.89■□□□□ 0.46
ZNF488-201ENST00000585316 HMGXB3Q12766 1538 aa17.87■□□□□ 0.45
ZNF488-201ENST00000585316 PEG3Q9GZU2 1588 aa17.86■□□□□ 0.45
ZNF488-201ENST00000585316 SOGA1O94964 1423 aa17.83■□□□□ 0.44
ZNF488-201ENST00000585316 FANCD2Q9BXW9 1451 aa17.82■□□□□ 0.44
ZNF488-201ENST00000585316 ATP1B4Q9UN42 357 aaPredicted RBP17.78■□□□□ 0.44
ZNF488-201ENST00000585316 RUSC2Q8N2Y8 1516 aa17.77■□□□□ 0.44
ZNF488-201ENST00000585316 TDRD9Q8NDG6 1382 aaKnown RBP17.75■□□□□ 0.43
ZNF488-201ENST00000585316 CFTRP13569 1480 aa17.74■□□□□ 0.43
ZNF488-201ENST00000585316 P3H3Q8IVL6 736 aa17.74■□□□□ 0.43
ZNF488-201ENST00000585316 CSRNP3Q8WYN3 585 aa17.73■□□□□ 0.43
ZNF488-201ENST00000585316 PDS5BQ9NTI5 1447 aa17.72■□□□□ 0.43
ZNF488-201ENST00000585316 RAD54L2Q9Y4B4 1467 aa17.69■□□□□ 0.42
ZNF488-201ENST00000585316 MYT1Q01538 1121 aa17.68■□□□□ 0.42
ZNF488-201ENST00000585316 CEP164Q9UPV0 1460 aa17.68■□□□□ 0.42
ZNF488-201ENST00000585316 ARID3CA6NKF2 412 aa17.66■□□□□ 0.42
ZNF488-201ENST00000585316 SYNJ1O43426 1573 aa17.64■□□□□ 0.41
ZNF488-201ENST00000585316 CUX2O14529 1486 aa17.61■□□□□ 0.41
ZNF488-201ENST00000585316 CUX1P39880 1505 aa17.57■□□□□ 0.4
ZNF488-201ENST00000585316 FGD5Q6ZNL6 1462 aa17.57■□□□□ 0.4
ZNF488-201ENST00000585316 AQRO60306 1485 aaKnown RBP eCLIP17.53■□□□□ 0.4
ZNF488-201ENST00000585316 TRIM26Q12899 539 aaPredicted RBP17.52■□□□□ 0.4
ZNF488-201ENST00000585316 URB2Q14146 1524 aaKnown RBP17.5■□□□□ 0.39
ZNF488-201ENST00000585316 NEUROD1Q13562 356 aa17.49■□□□□ 0.39
ZNF488-201ENST00000585316 CHMP7Q8WUX9 453 aaPredicted RBP17.49■□□□□ 0.39
ZNF488-201ENST00000585316 KIF21AQ7Z4S6 1674 aa17.48■□□□□ 0.39
ZNF488-201ENST00000585316 TOPBP1Q92547 1522 aa17.48■□□□□ 0.39
ZNF488-201ENST00000585316 GTF3C3Q9Y5Q9 886 aa17.47■□□□□ 0.39
ZNF488-201ENST00000585316 LAMC3Q9Y6N6 1575 aa17.46■□□□□ 0.39
ZNF488-201ENST00000585316 POLA1P09884 1462 aaPredicted RBP17.44■□□□□ 0.38
ZNF488-201ENST00000585316 KIF27Q86VH2 1401 aa17.44■□□□□ 0.38
ZNF488-201ENST00000585316 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.41■□□□□ 0.38
ZNF488-201ENST00000585316 HNRNPUL2Q1KMD3 747 aaKnown RBP17.41■□□□□ 0.38
ZNF488-201ENST00000585316 ZNF608Q9ULD9 1512 aaPredicted RBP17.4■□□□□ 0.38
ZNF488-201ENST00000585316 MRC2Q9UBG0 1479 aa17.39■□□□□ 0.37
ZNF488-201ENST00000585316 YTHDC1Q96MU7 727 aaKnown RBP17.37■□□□□ 0.37
ZNF488-201ENST00000585316 APLP2Q06481 763 aa17.37■□□□□ 0.37
ZNF488-201ENST00000585316 CARMIL1Q5VZK9 1371 aa17.35■□□□□ 0.37
ZNF488-201ENST00000585316 RAPGEF2Q9Y4G8 1499 aa17.35■□□□□ 0.37
ZNF488-201ENST00000585316 TOP2BQ02880 1626 aa17.33■□□□□ 0.36
ZNF488-201ENST00000585316 ACIN1Q9UKV3 1341 aaKnown RBP17.32■□□□□ 0.36
ZNF488-201ENST00000585316 IGF1RP08069 1367 aa17.31■□□□□ 0.36
ZNF488-201ENST00000585316 DNMBPQ6XZF7 1577 aa17.28■□□□□ 0.36
ZNF488-201ENST00000585316 GAPVD1Q14C86 1478 aa17.27■□□□□ 0.35
ZNF488-201ENST00000585316 ITGAEP38570 1179 aa17.24■□□□□ 0.35
ZNF488-201ENST00000585316 ZEB1P37275 1124 aaPredicted RBP17.19■□□□□ 0.34
ZNF488-201ENST00000585316 CEP162Q5TB80 1403 aa17.19■□□□□ 0.34
ZNF488-201ENST00000585316 GOLGA3Q08378 1498 aa17.19■□□□□ 0.34
ZNF488-201ENST00000585316 CLIP1P30622 1438 aa17.16■□□□□ 0.34
ZNF488-201ENST00000585316 CCER1Q8TC90 406 aaPredicted RBP17.13■□□□□ 0.33
ZNF488-201ENST00000585316 EEA1Q15075 1411 aa17.13■□□□□ 0.33
ZNF488-201ENST00000585316 SNAPC4Q5SXM2 1469 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms