RNA–Protein interactions for RNA: ENST00000340196.8

CCDC144CP-201, Transcript of coiled-coil domain containing 144C, pseudogene, humanhuman

TSL 2 BASIC

Gene CCDC144CP, Length 2,823 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144CP-201ENST00000340196 NISCHQ9Y2I1 1504 aa24.72■■□□□ 1.55
CCDC144CP-201ENST00000340196 CCDC180Q9P1Z9 1646 aa21.53■■□□□ 1.04
CCDC144CP-201ENST00000340196 CHIC1Q5VXU3 224 aa21.23■□□□□ 0.99
CCDC144CP-201ENST00000340196 SHROOM4Q9ULL8 1493 aa21.05■□□□□ 0.96
CCDC144CP-201ENST00000340196 AEBP2Q6ZN18 517 aaPredicted RBP20.83■□□□□ 0.92
CCDC144CP-201ENST00000340196 ZCCHC6Q5VYS8 1495 aaKnown RBP20.79■□□□□ 0.92
CCDC144CP-201ENST00000340196 SUPT5HO00267 1087 aaKnown RBP20.73■□□□□ 0.91
CCDC144CP-201ENST00000340196 DCAF1Q9Y4B6 1507 aa20.49■□□□□ 0.87
CCDC144CP-201ENST00000340196 DCAF8L2P0C7V8 631 aa20.24■□□□□ 0.83
CCDC144CP-201ENST00000340196 MYO15BQ96JP2 1530 aa20.23■□□□□ 0.83
CCDC144CP-201ENST00000340196 ABCC9O60706 1549 aa20.16■□□□□ 0.82
CCDC144CP-201ENST00000340196 NACADO15069 1562 aa20.01■□□□□ 0.79
CCDC144CP-201ENST00000340196 PCGF6Q9BYE7 350 aa19.97■□□□□ 0.79
CCDC144CP-201ENST00000340196 HRCP23327 699 aa19.96■□□□□ 0.79
CCDC144CP-201ENST00000340196 PPARGC1BQ86YN6 1023 aaKnown RBP19.88■□□□□ 0.77
CCDC144CP-201ENST00000340196 RB1CC1Q8TDY2 1594 aa19.79■□□□□ 0.76
CCDC144CP-201ENST00000340196 LOC105371045A0A1W2PR82 267 aa19.75■□□□□ 0.75
CCDC144CP-201ENST00000340196 SCRIBQ14160 1630 aa19.72■□□□□ 0.75
CCDC144CP-201ENST00000340196 UNC13AQ9UPW8 1703 aa19.43■□□□□ 0.7
CCDC144CP-201ENST00000340196 EHMT2Q96KQ7 1210 aa19.32■□□□□ 0.68
CCDC144CP-201ENST00000340196 FAM9AQ8IZU1 332 aaPredicted RBP19.24■□□□□ 0.67
CCDC144CP-201ENST00000340196 TRIM26Q12899 539 aaPredicted RBP19.23■□□□□ 0.67
CCDC144CP-201ENST00000340196 BICRAQ9NZM4 1560 aa19.22■□□□□ 0.67
CCDC144CP-201ENST00000340196 RSF1Q96T23 1441 aaPredicted RBP19.21■□□□□ 0.67
CCDC144CP-201ENST00000340196 CECR2Q9BXF3 1484 aa19.17■□□□□ 0.66
CCDC144CP-201ENST00000340196 PELP1Q8IZL8 1130 aaKnown RBP19.17■□□□□ 0.66
CCDC144CP-201ENST00000340196 MROH2BQ7Z745 1585 aa19.08■□□□□ 0.64
CCDC144CP-201ENST00000340196 TRIM41Q8WV44 630 aa19.07■□□□□ 0.64
CCDC144CP-201ENST00000340196 PHF23Q9BUL5 403 aaPredicted RBP19.07■□□□□ 0.64
CCDC144CP-201ENST00000340196 BAZ1AQ9NRL2 1556 aaPredicted RBP19.07■□□□□ 0.64
CCDC144CP-201ENST00000340196 PABPN1Q86U42 306 aaKnown RBP eCLIP19.02■□□□□ 0.64
CCDC144CP-201ENST00000340196 SMARCA4P51532 1647 aa18.97■□□□□ 0.63
CCDC144CP-201ENST00000340196 WIZO95785 1651 aa18.93■□□□□ 0.62
CCDC144CP-201ENST00000340196 PEG3Q9GZU2 1588 aa18.79■□□□□ 0.6
CCDC144CP-201ENST00000340196 SCAF1Q9H7N4 1312 aaKnown RBP18.76■□□□□ 0.59
CCDC144CP-201ENST00000340196 TOP2AP11388 1531 aaKnown RBP18.74■□□□□ 0.59
CCDC144CP-201ENST00000340196 ZEB1P37275 1124 aaPredicted RBP18.74■□□□□ 0.59
CCDC144CP-201ENST00000340196 TTBK1Q5TCY1 1321 aaPredicted RBP18.73■□□□□ 0.59
CCDC144CP-201ENST00000340196 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.7■□□□□ 0.58
CCDC144CP-201ENST00000340196 ATAD2BQ9ULI0 1458 aa18.63■□□□□ 0.57
CCDC144CP-201ENST00000340196 SMARCA2P51531 1590 aa18.63■□□□□ 0.57
CCDC144CP-201ENST00000340196 EIF4G1Q04637 1599 aaKnown RBP18.6■□□□□ 0.57
CCDC144CP-201ENST00000340196 CCDC88BA6NC98 1476 aa18.55■□□□□ 0.56
CCDC144CP-201ENST00000340196 CCER1Q8TC90 406 aaPredicted RBP18.53■□□□□ 0.56
CCDC144CP-201ENST00000340196 MYT1Q01538 1121 aa18.52■□□□□ 0.56
CCDC144CP-201ENST00000340196 BAZ1BQ9UIG0 1483 aaKnown RBP18.5■□□□□ 0.55
CCDC144CP-201ENST00000340196 NCAPD3P42695 1498 aa18.48■□□□□ 0.55
CCDC144CP-201ENST00000340196 HMGXB3Q12766 1538 aa18.46■□□□□ 0.55
CCDC144CP-201ENST00000340196 NEUROD1Q13562 356 aa18.42■□□□□ 0.54
CCDC144CP-201ENST00000340196 ABCC8Q09428 1581 aa18.38■□□□□ 0.53
CCDC144CP-201ENST00000340196 ACIN1Q9UKV3 1341 aaKnown RBP18.32■□□□□ 0.52
CCDC144CP-201ENST00000340196 DIEXFQ68CQ4 756 aaKnown RBP18.3■□□□□ 0.52
CCDC144CP-201ENST00000340196 CC2D2AQ9P2K1 1620 aa18.29■□□□□ 0.52
CCDC144CP-201ENST00000340196 SOGA1O94964 1423 aa18.26■□□□□ 0.51
CCDC144CP-201ENST00000340196 GTF3C3Q9Y5Q9 886 aa18.25■□□□□ 0.51
CCDC144CP-201ENST00000340196 CEP162Q5TB80 1403 aa18.22■□□□□ 0.51
CCDC144CP-201ENST00000340196 RUSC2Q8N2Y8 1516 aa18.21■□□□□ 0.51
CCDC144CP-201ENST00000340196 UBTFP17480 764 aaKnown RBP18.19■□□□□ 0.5
CCDC144CP-201ENST00000340196 YTHDC1Q96MU7 727 aaKnown RBP18.17■□□□□ 0.5
CCDC144CP-201ENST00000340196 CFTRP13569 1480 aa18.09■□□□□ 0.49
CCDC144CP-201ENST00000340196 HNRNPUL2Q1KMD3 747 aaKnown RBP18.09■□□□□ 0.49
CCDC144CP-201ENST00000340196 RANGAP1P46060 587 aaPredicted RBP18.08■□□□□ 0.49
CCDC144CP-201ENST00000340196 WRNQ14191 1432 aaPredicted RBP eCLIP18.07■□□□□ 0.48
CCDC144CP-201ENST00000340196 CSRNP3Q8WYN3 585 aa18.07■□□□□ 0.48
CCDC144CP-201ENST00000340196 CENPBP07199 599 aaPredicted RBP18.05■□□□□ 0.48
CCDC144CP-201ENST00000340196 TNIKQ9UKE5 1360 aa18.03■□□□□ 0.48
CCDC144CP-201ENST00000340196 PRDM2Q13029 1718 aa18.02■□□□□ 0.48
CCDC144CP-201ENST00000340196 ZNF316A6NFI3 1004 aaPredicted RBP17.99■□□□□ 0.47
CCDC144CP-201ENST00000340196 CADPSQ9ULU8 1353 aa17.98■□□□□ 0.47
CCDC144CP-201ENST00000340196 SYNJ1O43426 1573 aa17.98■□□□□ 0.47
CCDC144CP-201ENST00000340196 MIER1Q8N108 512 aa17.95■□□□□ 0.46
CCDC144CP-201ENST00000340196 TOP2BQ02880 1626 aa17.93■□□□□ 0.46
CCDC144CP-201ENST00000340196 BIVM-ERCC5R4GMW8 1640 aa17.91■□□□□ 0.46
CCDC144CP-201ENST00000340196 EEA1Q15075 1411 aa17.89■□□□□ 0.45
CCDC144CP-201ENST00000340196 GOLGA3Q08378 1498 aa17.88■□□□□ 0.45
CCDC144CP-201ENST00000340196 CUX1P39880 1505 aa17.84■□□□□ 0.45
CCDC144CP-201ENST00000340196 LAMC3Q9Y6N6 1575 aa17.82■□□□□ 0.44
CCDC144CP-201ENST00000340196 CLIP1P30622 1438 aa17.79■□□□□ 0.44
CCDC144CP-201ENST00000340196 DNAJC5BQ9UF47 199 aa17.77■□□□□ 0.44
CCDC144CP-201ENST00000340196 FANCD2Q9BXW9 1451 aa17.76■□□□□ 0.43
CCDC144CP-201ENST00000340196 NESP48681 1621 aa17.76■□□□□ 0.43
CCDC144CP-201ENST00000340196 RAPGEF2Q9Y4G8 1499 aa17.74■□□□□ 0.43
CCDC144CP-201ENST00000340196 PLPPR3Q6T4P5 718 aa17.72■□□□□ 0.43
CCDC144CP-201ENST00000340196 CEP164Q9UPV0 1460 aa17.72■□□□□ 0.43
CCDC144CP-201ENST00000340196 APLP2Q06481 763 aa17.71■□□□□ 0.43
CCDC144CP-201ENST00000340196 VPS8Q8N3P4 1428 aa17.68■□□□□ 0.42
CCDC144CP-201ENST00000340196 PDS5BQ9NTI5 1447 aa17.65■□□□□ 0.42
CCDC144CP-201ENST00000340196 KIF21BO75037 1637 aa17.65■□□□□ 0.42
CCDC144CP-201ENST00000340196 DNMBPQ6XZF7 1577 aa17.64■□□□□ 0.41
CCDC144CP-201ENST00000340196 KANK4Q5T7N3 995 aaPredicted RBP17.62■□□□□ 0.41
CCDC144CP-201ENST00000340196 FGD5Q6ZNL6 1462 aa17.6■□□□□ 0.41
CCDC144CP-201ENST00000340196 TOPBP1Q92547 1522 aa17.6■□□□□ 0.41
CCDC144CP-201ENST00000340196 KIF27Q86VH2 1401 aa17.59■□□□□ 0.41
CCDC144CP-201ENST00000340196 ITGAEP38570 1179 aa17.57■□□□□ 0.4
CCDC144CP-201ENST00000340196 KIF21AQ7Z4S6 1674 aa17.56■□□□□ 0.4
CCDC144CP-201ENST00000340196 URB2Q14146 1524 aaKnown RBP17.55■□□□□ 0.4
CCDC144CP-201ENST00000340196 DHX57Q6P158 1386 aaKnown RBP17.54■□□□□ 0.4
CCDC144CP-201ENST00000340196 PRXQ9BXM0 1461 aa17.54■□□□□ 0.4
CCDC144CP-201ENST00000340196 POLA1P09884 1462 aaPredicted RBP17.52■□□□□ 0.4
CCDC144CP-201ENST00000340196 ERICH3Q5RHP9 1530 aa17.52■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms