RNA–Protein interactions for RNA: ENST00000448048.6

AGAP4-203, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene AGAP4, Length 2,439 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGAP4-203ENST00000448048 NISCHQ9Y2I1 1504 aa29.1■■■□□ 2.25
AGAP4-203ENST00000448048 CCDC180Q9P1Z9 1646 aa24.9■■□□□ 1.58
AGAP4-203ENST00000448048 SHROOM4Q9ULL8 1493 aa24.55■■□□□ 1.52
AGAP4-203ENST00000448048 DCAF8L2P0C7V8 631 aa24.5■■□□□ 1.51
AGAP4-203ENST00000448048 ZCCHC6Q5VYS8 1495 aaKnown RBP24.47■■□□□ 1.51
AGAP4-203ENST00000448048 SUPT5HO00267 1087 aaKnown RBP23.79■■□□□ 1.4
AGAP4-203ENST00000448048 DCAF1Q9Y4B6 1507 aa23.79■■□□□ 1.4
AGAP4-203ENST00000448048 ABCC9O60706 1549 aa23.76■■□□□ 1.39
AGAP4-203ENST00000448048 SCRIBQ14160 1630 aa23.38■■□□□ 1.33
AGAP4-203ENST00000448048 MYO15BQ96JP2 1530 aa23.3■■□□□ 1.32
AGAP4-203ENST00000448048 NACADO15069 1562 aa23.21■■□□□ 1.31
AGAP4-203ENST00000448048 RB1CC1Q8TDY2 1594 aa22.97■■□□□ 1.27
AGAP4-203ENST00000448048 RSF1Q96T23 1441 aaPredicted RBP22.84■■□□□ 1.25
AGAP4-203ENST00000448048 CECR2Q9BXF3 1484 aa22.82■■□□□ 1.24
AGAP4-203ENST00000448048 CHIC1Q5VXU3 224 aa22.79■■□□□ 1.24
AGAP4-203ENST00000448048 PABPN1Q86U42 306 aaKnown RBP eCLIP22.68■■□□□ 1.22
AGAP4-203ENST00000448048 MROH2BQ7Z745 1585 aa22.64■■□□□ 1.22
AGAP4-203ENST00000448048 UNC13AQ9UPW8 1703 aa22.64■■□□□ 1.21
AGAP4-203ENST00000448048 WIZO95785 1651 aa22.48■■□□□ 1.19
AGAP4-203ENST00000448048 BICRAQ9NZM4 1560 aa22.42■■□□□ 1.18
AGAP4-203ENST00000448048 BAZ1AQ9NRL2 1556 aaPredicted RBP22.36■■□□□ 1.17
AGAP4-203ENST00000448048 SMARCA4P51532 1647 aa22.26■■□□□ 1.15
AGAP4-203ENST00000448048 LOC105371045A0A1W2PR82 267 aa22.19■■□□□ 1.14
AGAP4-203ENST00000448048 TRIM41Q8WV44 630 aa22.15■■□□□ 1.14
AGAP4-203ENST00000448048 TOP2AP11388 1531 aaKnown RBP22.05■■□□□ 1.12
AGAP4-203ENST00000448048 FAM9AQ8IZU1 332 aaPredicted RBP22.04■■□□□ 1.12
AGAP4-203ENST00000448048 HRCP23327 699 aa22.02■■□□□ 1.12
AGAP4-203ENST00000448048 CCDC88BA6NC98 1476 aa22.02■■□□□ 1.12
AGAP4-203ENST00000448048 SMARCA2P51531 1590 aa21.94■■□□□ 1.1
AGAP4-203ENST00000448048 EHMT2Q96KQ7 1210 aa21.94■■□□□ 1.1
AGAP4-203ENST00000448048 ATAD2BQ9ULI0 1458 aa21.87■■□□□ 1.09
AGAP4-203ENST00000448048 EIF4G1Q04637 1599 aaKnown RBP21.83■■□□□ 1.09
AGAP4-203ENST00000448048 PEG3Q9GZU2 1588 aa21.82■■□□□ 1.08
AGAP4-203ENST00000448048 ABCC8Q09428 1581 aa21.8■■□□□ 1.08
AGAP4-203ENST00000448048 PCGF6Q9BYE7 350 aa21.78■■□□□ 1.08
AGAP4-203ENST00000448048 BAZ1BQ9UIG0 1483 aaKnown RBP21.77■■□□□ 1.07
AGAP4-203ENST00000448048 NCAPD3P42695 1498 aa21.53■■□□□ 1.04
AGAP4-203ENST00000448048 PPARGC1BQ86YN6 1023 aaKnown RBP21.5■■□□□ 1.03
AGAP4-203ENST00000448048 SOGA1O94964 1423 aa21.5■■□□□ 1.03
AGAP4-203ENST00000448048 WRNQ14191 1432 aaPredicted RBP eCLIP21.46■■□□□ 1.03
AGAP4-203ENST00000448048 RUSC2Q8N2Y8 1516 aa21.45■■□□□ 1.02
AGAP4-203ENST00000448048 HMGXB3Q12766 1538 aa21.42■■□□□ 1.02
AGAP4-203ENST00000448048 SYNJ1O43426 1573 aa21.38■■□□□ 1.01
AGAP4-203ENST00000448048 CC2D2AQ9P2K1 1620 aa21.34■■□□□ 1.01
AGAP4-203ENST00000448048 TRIM26Q12899 539 aaPredicted RBP21.3■■□□□ 1
AGAP4-203ENST00000448048 CSRNP3Q8WYN3 585 aa21.3■■□□□ 1
AGAP4-203ENST00000448048 CFTRP13569 1480 aa21.2■□□□□ 0.98
AGAP4-203ENST00000448048 UBTFP17480 764 aaKnown RBP21.2■□□□□ 0.98
AGAP4-203ENST00000448048 DNAJC5BQ9UF47 199 aa21.19■□□□□ 0.98
AGAP4-203ENST00000448048 TOP2BQ02880 1626 aa21.11■□□□□ 0.97
AGAP4-203ENST00000448048 EEA1Q15075 1411 aa21.11■□□□□ 0.97
AGAP4-203ENST00000448048 CADPSQ9ULU8 1353 aa21.11■□□□□ 0.97
AGAP4-203ENST00000448048 CUX1P39880 1505 aa21.1■□□□□ 0.97
AGAP4-203ENST00000448048 CEP162Q5TB80 1403 aa21.06■□□□□ 0.96
AGAP4-203ENST00000448048 RANGAP1P46060 587 aaPredicted RBP21.05■□□□□ 0.96
AGAP4-203ENST00000448048 TNIKQ9UKE5 1360 aa21.04■□□□□ 0.96
AGAP4-203ENST00000448048 TTBK1Q5TCY1 1321 aaPredicted RBP21.04■□□□□ 0.96
AGAP4-203ENST00000448048 BIVM-ERCC5R4GMW8 1640 aa21.02■□□□□ 0.96
AGAP4-203ENST00000448048 NESP48681 1621 aa21.01■□□□□ 0.95
AGAP4-203ENST00000448048 GOLGA3Q08378 1498 aa21■□□□□ 0.95
AGAP4-203ENST00000448048 ZEB1P37275 1124 aaPredicted RBP20.97■□□□□ 0.95
AGAP4-203ENST00000448048 RAPGEF2Q9Y4G8 1499 aa20.97■□□□□ 0.95
AGAP4-203ENST00000448048 CEP164Q9UPV0 1460 aa20.94■□□□□ 0.94
AGAP4-203ENST00000448048 FANCD2Q9BXW9 1451 aa20.89■□□□□ 0.94
AGAP4-203ENST00000448048 KIF21BO75037 1637 aa20.87■□□□□ 0.93
AGAP4-203ENST00000448048 PRDM2Q13029 1718 aa20.87■□□□□ 0.93
AGAP4-203ENST00000448048 KIF27Q86VH2 1401 aa20.83■□□□□ 0.92
AGAP4-203ENST00000448048 FGD5Q6ZNL6 1462 aa20.82■□□□□ 0.92
AGAP4-203ENST00000448048 CLIP1P30622 1438 aa20.79■□□□□ 0.92
AGAP4-203ENST00000448048 CUX2O14529 1486 aa20.79■□□□□ 0.92
AGAP4-203ENST00000448048 PRXQ9BXM0 1461 aa20.78■□□□□ 0.92
AGAP4-203ENST00000448048 RAD54L2Q9Y4B4 1467 aa20.74■□□□□ 0.91
AGAP4-203ENST00000448048 IGF1RP08069 1367 aa20.72■□□□□ 0.91
AGAP4-203ENST00000448048 TOPBP1Q92547 1522 aa20.68■□□□□ 0.9
AGAP4-203ENST00000448048 LAMC3Q9Y6N6 1575 aa20.66■□□□□ 0.9
AGAP4-203ENST00000448048 POLA1P09884 1462 aaPredicted RBP20.65■□□□□ 0.9
AGAP4-203ENST00000448048 URB2Q14146 1524 aaKnown RBP20.64■□□□□ 0.89
AGAP4-203ENST00000448048 ERICH3Q5RHP9 1530 aa20.64■□□□□ 0.89
AGAP4-203ENST00000448048 DNMBPQ6XZF7 1577 aa20.63■□□□□ 0.89
AGAP4-203ENST00000448048 CARMIL1Q5VZK9 1371 aa20.6■□□□□ 0.89
AGAP4-203ENST00000448048 VPS8Q8N3P4 1428 aa20.59■□□□□ 0.89
AGAP4-203ENST00000448048 PDS5BQ9NTI5 1447 aa20.59■□□□□ 0.89
AGAP4-203ENST00000448048 KIF21AQ7Z4S6 1674 aa20.56■□□□□ 0.88
AGAP4-203ENST00000448048 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.55■□□□□ 0.88
AGAP4-203ENST00000448048 TDRD9Q8NDG6 1382 aaKnown RBP20.55■□□□□ 0.88
AGAP4-203ENST00000448048 ARAP1Q96P48 1450 aa20.52■□□□□ 0.88
AGAP4-203ENST00000448048 APLP2Q06481 763 aa20.52■□□□□ 0.87
AGAP4-203ENST00000448048 ABCA10Q8WWZ4 1543 aa20.52■□□□□ 0.87
AGAP4-203ENST00000448048 SCAF1Q9H7N4 1312 aaKnown RBP20.5■□□□□ 0.87
AGAP4-203ENST00000448048 P3H3Q8IVL6 736 aa20.48■□□□□ 0.87
AGAP4-203ENST00000448048 PELP1Q8IZL8 1130 aaKnown RBP20.46■□□□□ 0.87
AGAP4-203ENST00000448048 ARHGAP35Q9NRY4 1499 aa20.46■□□□□ 0.87
AGAP4-203ENST00000448048 KANK4Q5T7N3 995 aaPredicted RBP20.45■□□□□ 0.86
AGAP4-203ENST00000448048 HNRNPUL2Q1KMD3 747 aaKnown RBP20.41■□□□□ 0.86
AGAP4-203ENST00000448048 CCER1Q8TC90 406 aaPredicted RBP20.38■□□□□ 0.85
AGAP4-203ENST00000448048 GAPVD1Q14C86 1478 aa20.35■□□□□ 0.85
AGAP4-203ENST00000448048 WDR97A6NE52 1622 aa20.33■□□□□ 0.85
AGAP4-203ENST00000448048 AQRO60306 1485 aaKnown RBP eCLIP20.32■□□□□ 0.84
AGAP4-203ENST00000448048 ATP1B4Q9UN42 357 aaPredicted RBP20.31■□□□□ 0.84
AGAP4-203ENST00000448048 MRC2Q9UBG0 1479 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms