Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
RAB5BP61020 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC12.83□□□□□ -0.36
RAB5BP61020 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
RAB5BP61020 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RAB5BP61020 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
RAB5BP61020 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
RAB5BP61020 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RAB5BP61020 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
RAB5BP61020 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RAB5BP61020 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RAB5BP61020 AC091951.1-201ENST00000512854 2465 ntBASIC12.83□□□□□ -0.36
RAB5BP61020 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
RAB5BP61020 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
RAB5BP61020 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
RAB5BP61020 COL6A3-203ENST00000353578 9963 ntTSL 5 BASIC12.83□□□□□ -0.36
RAB5BP61020 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RAB5BP61020 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RAB5BP61020 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RAB5BP61020 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RAB5BP61020 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
RAB5BP61020 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
RAB5BP61020 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
RAB5BP61020 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
RAB5BP61020 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
RAB5BP61020 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RAB5BP61020 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
RAB5BP61020 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
RAB5BP61020 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RAB5BP61020 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
RAB5BP61020 GOLGA7B-203ENST00000596005 6378 ntTSL 2 BASIC12.82□□□□□ -0.36
RAB5BP61020 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
RAB5BP61020 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RAB5BP61020 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
RAB5BP61020 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RAB5BP61020 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RAB5BP61020 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC12.82□□□□□ -0.36
RAB5BP61020 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
RAB5BP61020 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
RAB5BP61020 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
RAB5BP61020 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC12.82□□□□□ -0.36
RAB5BP61020 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
RAB5BP61020 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RAB5BP61020 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
RAB5BP61020 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RAB5BP61020 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
RAB5BP61020 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RAB5BP61020 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RAB5BP61020 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RAB5BP61020 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC12.82□□□□□ -0.36
RAB5BP61020 ELP6-205ENST00000439305 880 ntTSL 2 BASIC12.82□□□□□ -0.36
RAB5BP61020 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
RAB5BP61020 AC009065.1-201ENST00000564055 1225 ntBASIC12.82□□□□□ -0.36
RAB5BP61020 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC12.82□□□□□ -0.36
RAB5BP61020 STRCP1-201ENST00000509801 5328 ntBASIC12.82□□□□□ -0.36
RAB5BP61020 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
RAB5BP61020 API5-202ENST00000420461 2009 ntTSL 2 BASIC12.82□□□□□ -0.36
RAB5BP61020 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RAB5BP61020 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC12.82□□□□□ -0.36
RAB5BP61020 MED29-202ENST00000594368 1471 ntTSL 2 BASIC12.82□□□□□ -0.36
RAB5BP61020 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RAB5BP61020 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RAB5BP61020 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
RAB5BP61020 AL928921.2-201ENST00000641325 2442 ntBASIC12.82□□□□□ -0.36
RAB5BP61020 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RAB5BP61020 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC12.82□□□□□ -0.36
RAB5BP61020 AL024508.2-201ENST00000607749 1894 ntBASIC12.82□□□□□ -0.36
RAB5BP61020 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC12.82□□□□□ -0.36
RAB5BP61020 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
RAB5BP61020 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
RAB5BP61020 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
RAB5BP61020 TBX3-202ENST00000349155 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RAB5BP61020 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC12.82□□□□□ -0.36
RAB5BP61020 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC12.82□□□□□ -0.36
RAB5BP61020 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
RAB5BP61020 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RAB5BP61020 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RAB5BP61020 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC12.82□□□□□ -0.36
RAB5BP61020 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
RAB5BP61020 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RAB5BP61020 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
RAB5BP61020 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
RAB5BP61020 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
RAB5BP61020 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RAB5BP61020 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAB5BP61020 PPT1-213ENST00000641319 2388 ntBASIC12.81□□□□□ -0.36
RAB5BP61020 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAB5BP61020 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
RAB5BP61020 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC12.81□□□□□ -0.36
RAB5BP61020 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAB5BP61020 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAB5BP61020 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC12.81□□□□□ -0.36
RAB5BP61020 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC12.81□□□□□ -0.36
RAB5BP61020 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAB5BP61020 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
RAB5BP61020 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC12.81□□□□□ -0.36
RAB5BP61020 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAB5BP61020 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
RAB5BP61020 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAB5BP61020 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RAB5BP61020 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC12.81□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms