Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
TM4SF4P48230 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TM4SF4P48230 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TM4SF4P48230 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TM4SF4P48230 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
TM4SF4P48230 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC18.34■□□□□ 0.53
TM4SF4P48230 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TM4SF4P48230 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TM4SF4P48230 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.34■□□□□ 0.53
TM4SF4P48230 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
TM4SF4P48230 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TM4SF4P48230 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TM4SF4P48230 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC18.34■□□□□ 0.53
TM4SF4P48230 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TM4SF4P48230 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
TM4SF4P48230 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TM4SF4P48230 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TM4SF4P48230 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TM4SF4P48230 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC18.34■□□□□ 0.53
TM4SF4P48230 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC18.34■□□□□ 0.53
TM4SF4P48230 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TM4SF4P48230 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC18.34■□□□□ 0.53
TM4SF4P48230 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
TM4SF4P48230 FAM197Y7-201ENST00000432892 766 ntBASIC18.34■□□□□ 0.53
TM4SF4P48230 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
TM4SF4P48230 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC18.34■□□□□ 0.53
TM4SF4P48230 APOA2-204ENST00000464492 530 ntTSL 3 BASIC18.34■□□□□ 0.53
TM4SF4P48230 TMEM198B-204ENST00000484016 896 ntBASIC18.34■□□□□ 0.53
TM4SF4P48230 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC18.34■□□□□ 0.53
TM4SF4P48230 AC243562.2-201ENST00000561247 970 ntBASIC18.34■□□□□ 0.53
TM4SF4P48230 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC18.34■□□□□ 0.53
TM4SF4P48230 U62317.3-201ENST00000608319 855 ntBASIC18.34■□□□□ 0.53
TM4SF4P48230 AC132938.4-201ENST00000623835 848 ntBASIC18.34■□□□□ 0.53
TM4SF4P48230 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
TM4SF4P48230 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TM4SF4P48230 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC18.34■□□□□ 0.53
TM4SF4P48230 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TM4SF4P48230 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
TM4SF4P48230 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TM4SF4P48230 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
TM4SF4P48230 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TM4SF4P48230 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
TM4SF4P48230 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.33■□□□□ 0.53
TM4SF4P48230 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
TM4SF4P48230 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
TM4SF4P48230 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
TM4SF4P48230 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
TM4SF4P48230 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TM4SF4P48230 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TM4SF4P48230 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TM4SF4P48230 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TM4SF4P48230 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
TM4SF4P48230 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TM4SF4P48230 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC18.33■□□□□ 0.52
TM4SF4P48230 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC18.33■□□□□ 0.52
TM4SF4P48230 MTX1P1-201ENST00000440904 838 ntBASIC18.33■□□□□ 0.52
TM4SF4P48230 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC18.33■□□□□ 0.52
TM4SF4P48230 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TM4SF4P48230 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC18.33■□□□□ 0.52
TM4SF4P48230 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC18.33■□□□□ 0.52
TM4SF4P48230 IFT20-206ENST00000578122 834 ntTSL 2 BASIC18.33■□□□□ 0.52
TM4SF4P48230 IFT20-208ENST00000578985 831 ntTSL 3 BASIC18.33■□□□□ 0.52
TM4SF4P48230 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TM4SF4P48230 AC128714.1-201ENST00000637035 887 ntBASIC18.33■□□□□ 0.52
TM4SF4P48230 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TM4SF4P48230 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC18.33■□□□□ 0.52
TM4SF4P48230 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
TM4SF4P48230 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
TM4SF4P48230 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TM4SF4P48230 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TM4SF4P48230 AC015818.8-201ENST00000587907 1519 ntBASIC18.33■□□□□ 0.52
TM4SF4P48230 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TM4SF4P48230 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC18.33■□□□□ 0.52
TM4SF4P48230 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC18.33■□□□□ 0.52
TM4SF4P48230 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
TM4SF4P48230 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TM4SF4P48230 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
TM4SF4P48230 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.32■□□□□ 0.52
TM4SF4P48230 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TM4SF4P48230 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
TM4SF4P48230 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
TM4SF4P48230 AC004408.2-201ENST00000623613 2777 ntBASIC18.32■□□□□ 0.52
TM4SF4P48230 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
TM4SF4P48230 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
TM4SF4P48230 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
TM4SF4P48230 LINC01144-201ENST00000626198 1710 ntBASIC18.32■□□□□ 0.52
TM4SF4P48230 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.32■□□□□ 0.52
TM4SF4P48230 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TM4SF4P48230 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TM4SF4P48230 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TM4SF4P48230 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC18.32■□□□□ 0.52
TM4SF4P48230 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC18.32■□□□□ 0.52
TM4SF4P48230 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
TM4SF4P48230 GUK1-206ENST00000366723 845 ntTSL 5 BASIC18.32■□□□□ 0.52
TM4SF4P48230 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC18.32■□□□□ 0.52
TM4SF4P48230 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TM4SF4P48230 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC18.32■□□□□ 0.52
TM4SF4P48230 AC026410.3-201ENST00000514280 936 ntBASIC18.32■□□□□ 0.52
TM4SF4P48230 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TM4SF4P48230 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms