RNA–Protein interactions for RNA: ENST00000595535.5

SPTBN4-207, Transcript of spectrin beta, non-erythrocytic 4, humanhuman

TSL 5 BASIC

Gene SPTBN4, Length 6,105 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4-207ENST00000595535 DCAF8L2P0C7V8 631 aa34.26■■■■□ 3.08
SPTBN4-207ENST00000595535 SUPT5HO00267 1087 aaKnown RBP32.12■■■□□ 2.73
SPTBN4-207ENST00000595535 SHROOM4Q9ULL8 1493 aa31.55■■■□□ 2.64
SPTBN4-207ENST00000595535 EHMT2Q96KQ7 1210 aa31.55■■■□□ 2.64
SPTBN4-207ENST00000595535 NISCHQ9Y2I1 1504 aa31.53■■■□□ 2.64
SPTBN4-207ENST00000595535 APLP2Q06481 763 aa30.73■■■□□ 2.51
SPTBN4-207ENST00000595535 PELP1Q8IZL8 1130 aaKnown RBP30.53■■■□□ 2.48
SPTBN4-207ENST00000595535 FAM9AQ8IZU1 332 aaPredicted RBP30.44■■■□□ 2.46
SPTBN4-207ENST00000595535 TTBK1Q5TCY1 1321 aaPredicted RBP30.39■■■□□ 2.46
SPTBN4-207ENST00000595535 RANGAP1P46060 587 aaPredicted RBP30.18■■■□□ 2.42
SPTBN4-207ENST00000595535 ATP1B4Q9UN42 357 aaPredicted RBP29.92■■■□□ 2.38
SPTBN4-207ENST00000595535 PCGF6Q9BYE7 350 aa29.89■■■□□ 2.37
SPTBN4-207ENST00000595535 TRIM41Q8WV44 630 aa29.65■■■□□ 2.34
SPTBN4-207ENST00000595535 CCER1Q8TC90 406 aaPredicted RBP29.51■■■□□ 2.31
SPTBN4-207ENST00000595535 UBTFP17480 764 aaKnown RBP29.49■■■□□ 2.31
SPTBN4-207ENST00000595535 ERICH6Q7L0X2 663 aa29.42■■■□□ 2.3
SPTBN4-207ENST00000595535 CENPBP07199 599 aaPredicted RBP29.34■■■□□ 2.29
SPTBN4-207ENST00000595535 ZEB1P37275 1124 aaPredicted RBP29.24■■■□□ 2.27
SPTBN4-207ENST00000595535 PPARGC1BQ86YN6 1023 aaKnown RBP29.03■■■□□ 2.24
SPTBN4-207ENST00000595535 YTHDC1Q96MU7 727 aaKnown RBP29■■■□□ 2.23
SPTBN4-207ENST00000595535 NEFLP07196 543 aa28.95■■■□□ 2.22
SPTBN4-207ENST00000595535 MYT1LQ9UL68 1186 aa28.95■■■□□ 2.22
SPTBN4-207ENST00000595535 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.84■■■□□ 2.21
SPTBN4-207ENST00000595535 HNRNPUL2Q1KMD3 747 aaKnown RBP28.84■■■□□ 2.21
SPTBN4-207ENST00000595535 ITGAEP38570 1179 aa28.71■■■□□ 2.19
SPTBN4-207ENST00000595535 POLR3GLQ9BT43 218 aa28.66■■■□□ 2.18
SPTBN4-207ENST00000595535 CHIC1Q5VXU3 224 aa28.57■■■□□ 2.16
SPTBN4-207ENST00000595535 CNGB1Q14028 1251 aaPredicted RBP28.41■■■□□ 2.14
SPTBN4-207ENST00000595535 TRIM26Q12899 539 aaPredicted RBP28.41■■■□□ 2.14
SPTBN4-207ENST00000595535 DAXXQ9UER7 740 aaPredicted RBP28.26■■■□□ 2.11
SPTBN4-207ENST00000595535 LOC105371045A0A1W2PR82 267 aa28.23■■■□□ 2.11
SPTBN4-207ENST00000595535 SLC4A1APQ9BWU0 796 aaKnown RBP28.23■■■□□ 2.11
SPTBN4-207ENST00000595535 HRCP23327 699 aa28.06■■■□□ 2.08
SPTBN4-207ENST00000595535 PABPN1Q86U42 306 aaKnown RBP eCLIP28.02■■■□□ 2.08
SPTBN4-207ENST00000595535 FAM50AQ14320 339 aaKnown RBP27.89■■■□□ 2.06
SPTBN4-207ENST00000595535 MYT1Q01538 1121 aa27.89■■■□□ 2.05
SPTBN4-207ENST00000595535 ABCC9O60706 1549 aa27.84■■■□□ 2.05
SPTBN4-207ENST00000595535 TRIM52Q96A61 297 aa27.8■■■□□ 2.04
SPTBN4-207ENST00000595535 CLSPNQ9HAW4 1339 aa27.73■■■□□ 2.03
SPTBN4-207ENST00000595535 FBLN2P98095 1184 aa27.73■■■□□ 2.03
SPTBN4-207ENST00000595535 NEUROD1Q13562 356 aa27.64■■■□□ 2.02
SPTBN4-207ENST00000595535 ZNF316A6NFI3 1004 aaPredicted RBP27.59■■■□□ 2.01
SPTBN4-207ENST00000595535 ZNF326Q5BKZ1 582 aaKnown RBP27.55■■■□□ 2
SPTBN4-207ENST00000595535 DIEXFQ68CQ4 756 aaKnown RBP27.54■■■□□ 2
SPTBN4-207ENST00000595535 ARID3CA6NKF2 412 aa27.41■■□□□ 1.98
SPTBN4-207ENST00000595535 RTL5Q5HYW3 569 aaPredicted RBP27.39■■□□□ 1.98
SPTBN4-207ENST00000595535 BCANQ96GW7 911 aa27.35■■□□□ 1.97
SPTBN4-207ENST00000595535 SLC24A1O60721 1099 aa27.33■■□□□ 1.96
SPTBN4-207ENST00000595535 P3H3Q8IVL6 736 aa27.28■■□□□ 1.96
SPTBN4-207ENST00000595535 ZBTB47Q9UFB7 747 aaPredicted RBP27.24■■□□□ 1.95
SPTBN4-207ENST00000595535 BCL11AQ9H165 835 aa27.23■■□□□ 1.95
SPTBN4-207ENST00000595535 ANP32CO43423 234 aa27.23■■□□□ 1.95
SPTBN4-207ENST00000595535 ZNF777Q9ULD5 760 aaPredicted RBP27.12■■□□□ 1.93
SPTBN4-207ENST00000595535 CANXP27824 592 aaKnown RBP27.1■■□□□ 1.93
SPTBN4-207ENST00000595535 PLPPR3Q6T4P5 718 aa27.06■■□□□ 1.92
SPTBN4-207ENST00000595535 NEFMP07197 916 aa27.03■■□□□ 1.92
SPTBN4-207ENST00000595535 CDK11AQ9UQ88 783 aaPredicted RBP26.94■■□□□ 1.9
SPTBN4-207ENST00000595535 ESF1Q9H501 851 aaKnown RBP26.91■■□□□ 1.9
SPTBN4-207ENST00000595535 GTF3C3Q9Y5Q9 886 aa26.88■■□□□ 1.89
SPTBN4-207ENST00000595535 CHGAP10645 457 aaKnown RBP26.83■■□□□ 1.89
SPTBN4-207ENST00000595535 CSRNP3Q8WYN3 585 aa26.82■■□□□ 1.88
SPTBN4-207ENST00000595535 STAG3Q9UJ98 1225 aa26.78■■□□□ 1.88
SPTBN4-207ENST00000595535 NPM1P06748 294 aaKnown RBP eCLIP26.67■■□□□ 1.86
SPTBN4-207ENST00000595535 NPM2Q86SE8 214 aaKnown RBP26.58■■□□□ 1.84
SPTBN4-207ENST00000595535 SCRIBQ14160 1630 aa26.54■■□□□ 1.84
SPTBN4-207ENST00000595535 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.53■■□□□ 1.84
SPTBN4-207ENST00000595535 TONSLQ96HA7 1378 aa26.52■■□□□ 1.84
SPTBN4-207ENST00000595535 ANP32AP39687 249 aaKnown RBP26.51■■□□□ 1.83
SPTBN4-207ENST00000595535 CHIC2Q9UKJ5 165 aa26.45■■□□□ 1.83
SPTBN4-207ENST00000595535 SALL2Q9Y467 1007 aaPredicted RBP26.43■■□□□ 1.82
SPTBN4-207ENST00000595535 FAM9BQ8IZU0 186 aa26.4■■□□□ 1.82
SPTBN4-207ENST00000595535 SCAF1Q9H7N4 1312 aaKnown RBP26.39■■□□□ 1.82
SPTBN4-207ENST00000595535 SENP3Q9H4L4 574 aaPredicted RBP26.38■■□□□ 1.81
SPTBN4-207ENST00000595535 HSP90AA1P07900 732 aaKnown RBP26.36■■□□□ 1.81
SPTBN4-207ENST00000595535 HNRNPUQ00839 825 aaKnown RBP eCLIP26.34■■□□□ 1.81
SPTBN4-207ENST00000595535 DDX10Q13206 875 aaKnown RBP26.33■■□□□ 1.81
SPTBN4-207ENST00000595535 ACIN1Q9UKV3 1341 aaKnown RBP26.33■■□□□ 1.81
SPTBN4-207ENST00000595535 FKBP8Q14318 412 aa26.32■■□□□ 1.8
SPTBN4-207ENST00000595535 PLEKHG5O94827 1062 aa26.3■■□□□ 1.8
SPTBN4-207ENST00000595535 KDM2AQ9Y2K7 1162 aa26.28■■□□□ 1.8
SPTBN4-207ENST00000595535 A0A0G2JS52 829 aa26.28■■□□□ 1.8
SPTBN4-207ENST00000595535 CHMP7Q8WUX9 453 aaPredicted RBP26.26■■□□□ 1.79
SPTBN4-207ENST00000595535 UPF2Q9HAU5 1272 aaKnown RBP26.23■■□□□ 1.79
SPTBN4-207ENST00000595535 TSPY4P0CV99 314 aa26.22■■□□□ 1.79
SPTBN4-207ENST00000595535 TSPY10P0CW01 314 aa26.22■■□□□ 1.79
SPTBN4-207ENST00000595535 TMC1Q8TDI8 760 aa26.22■■□□□ 1.79
SPTBN4-207ENST00000595535 ZBTB7CA1YPR0 619 aa26.19■■□□□ 1.78
SPTBN4-207ENST00000595535 ANP32BQ92688 251 aaKnown RBP26.19■■□□□ 1.78
SPTBN4-207ENST00000595535 WDR43Q15061 677 aaKnown RBP eCLIP26.18■■□□□ 1.78
SPTBN4-207ENST00000595535 KCNH8Q96L42 1107 aa26.13■■□□□ 1.77
SPTBN4-207ENST00000595535 MTUS2Q5JR59 1369 aa26.11■■□□□ 1.77
SPTBN4-207ENST00000595535 C14orf37Q86TY3 774 aa26.08■■□□□ 1.77
SPTBN4-207ENST00000595535 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.08■■□□□ 1.77
SPTBN4-207ENST00000595535 CCDC136Q96JN2 1154 aa26.04■■□□□ 1.76
SPTBN4-207ENST00000595535 MRS2Q9HD23 443 aa26.03■■□□□ 1.76
SPTBN4-207ENST00000595535 PPP1R15AO75807 674 aaPredicted RBP26.01■■□□□ 1.75
SPTBN4-207ENST00000595535 HIRIP3Q9BW71 556 aaPredicted RBP26.01■■□□□ 1.75
SPTBN4-207ENST00000595535 ZCCHC6Q5VYS8 1495 aaKnown RBP25.99■■□□□ 1.75
SPTBN4-207ENST00000595535 RRP7BPQ9NSQ0 103 aa25.98■■□□□ 1.75
SPTBN4-207ENST00000595535 ARID4BQ4LE39 1312 aaPredicted RBP25.94■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms