Protein–RNA interactions for Protein: Q96KA5

CLPTM1L, Cleft lip and palate transmembrane protein 1-like protein, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1LQ96KA5 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLPTM1LQ96KA5 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLPTM1LQ96KA5 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLPTM1LQ96KA5 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC15.79■□□□□ 0.12
CLPTM1LQ96KA5 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLPTM1LQ96KA5 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CLPTM1LQ96KA5 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CLPTM1LQ96KA5 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CLPTM1LQ96KA5 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLPTM1LQ96KA5 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC15.79■□□□□ 0.12
CLPTM1LQ96KA5 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLPTM1LQ96KA5 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
CLPTM1LQ96KA5 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLPTM1LQ96KA5 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CLPTM1LQ96KA5 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC15.79■□□□□ 0.12
CLPTM1LQ96KA5 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC15.79■□□□□ 0.12
CLPTM1LQ96KA5 SPDYE13P-201ENST00000445314 798 ntBASIC15.79■□□□□ 0.12
CLPTM1LQ96KA5 AC091607.1-201ENST00000490318 1060 ntBASIC15.79■□□□□ 0.12
CLPTM1LQ96KA5 DUT-205ENST00000558813 769 ntTSL 2 BASIC15.79■□□□□ 0.12
CLPTM1LQ96KA5 AC011840.4-201ENST00000578471 627 ntBASIC15.79■□□□□ 0.12
CLPTM1LQ96KA5 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC15.79■□□□□ 0.12
CLPTM1LQ96KA5 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CLPTM1LQ96KA5 DFFB-212ENST00000625756 649 ntTSL 5 BASIC15.79■□□□□ 0.12
CLPTM1LQ96KA5 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLPTM1LQ96KA5 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CLPTM1LQ96KA5 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CLPTM1LQ96KA5 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC15.79■□□□□ 0.12
CLPTM1LQ96KA5 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLPTM1LQ96KA5 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC15.79■□□□□ 0.12
CLPTM1LQ96KA5 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLPTM1LQ96KA5 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CLPTM1LQ96KA5 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC15.79■□□□□ 0.12
CLPTM1LQ96KA5 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC15.79■□□□□ 0.12
CLPTM1LQ96KA5 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLPTM1LQ96KA5 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CLPTM1LQ96KA5 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC15.79■□□□□ 0.12
CLPTM1LQ96KA5 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC15.79■□□□□ 0.12
CLPTM1LQ96KA5 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLPTM1LQ96KA5 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLPTM1LQ96KA5 PMPCAP1-201ENST00000508114 1576 ntBASIC15.79■□□□□ 0.12
CLPTM1LQ96KA5 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
CLPTM1LQ96KA5 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CLPTM1LQ96KA5 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC15.78■□□□□ 0.12
CLPTM1LQ96KA5 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC15.78■□□□□ 0.12
CLPTM1LQ96KA5 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CLPTM1LQ96KA5 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLPTM1LQ96KA5 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLPTM1LQ96KA5 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLPTM1LQ96KA5 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC15.78■□□□□ 0.12
CLPTM1LQ96KA5 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CLPTM1LQ96KA5 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLPTM1LQ96KA5 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLPTM1LQ96KA5 TOP3BP1-201ENST00000420768 1380 ntBASIC15.78■□□□□ 0.12
CLPTM1LQ96KA5 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLPTM1LQ96KA5 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLPTM1LQ96KA5 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC15.78■□□□□ 0.12
CLPTM1LQ96KA5 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC15.78■□□□□ 0.12
CLPTM1LQ96KA5 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLPTM1LQ96KA5 AC112907.2-201ENST00000448639 330 ntBASIC15.78■□□□□ 0.12
CLPTM1LQ96KA5 YBX1P2-201ENST00000489612 999 ntBASIC15.78■□□□□ 0.12
CLPTM1LQ96KA5 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC15.78■□□□□ 0.12
CLPTM1LQ96KA5 MIR4492-201ENST00000581627 80 ntBASIC15.78■□□□□ 0.12
CLPTM1LQ96KA5 AC011467.2-201ENST00000598425 242 ntBASIC15.78■□□□□ 0.12
CLPTM1LQ96KA5 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
CLPTM1LQ96KA5 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC15.78■□□□□ 0.12
CLPTM1LQ96KA5 POR-201ENST00000394893 2532 ntTSL 5 BASIC15.78■□□□□ 0.12
CLPTM1LQ96KA5 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CLPTM1LQ96KA5 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC15.78■□□□□ 0.12
CLPTM1LQ96KA5 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLPTM1LQ96KA5 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC15.78■□□□□ 0.12
CLPTM1LQ96KA5 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLPTM1LQ96KA5 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CLPTM1LQ96KA5 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CLPTM1LQ96KA5 AC005089.1-201ENST00000619486 2241 ntBASIC15.78■□□□□ 0.12
CLPTM1LQ96KA5 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CLPTM1LQ96KA5 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
CLPTM1LQ96KA5 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
CLPTM1LQ96KA5 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
CLPTM1LQ96KA5 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
CLPTM1LQ96KA5 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC15.77■□□□□ 0.12
CLPTM1LQ96KA5 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CLPTM1LQ96KA5 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
CLPTM1LQ96KA5 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CLPTM1LQ96KA5 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC15.77■□□□□ 0.12
CLPTM1LQ96KA5 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC15.77■□□□□ 0.12
CLPTM1LQ96KA5 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CLPTM1LQ96KA5 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CLPTM1LQ96KA5 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC15.77■□□□□ 0.12
CLPTM1LQ96KA5 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CLPTM1LQ96KA5 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CLPTM1LQ96KA5 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CLPTM1LQ96KA5 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC15.77■□□□□ 0.12
CLPTM1LQ96KA5 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CLPTM1LQ96KA5 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC15.77■□□□□ 0.12
CLPTM1LQ96KA5 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CLPTM1LQ96KA5 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC15.77■□□□□ 0.12
CLPTM1LQ96KA5 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC15.77■□□□□ 0.12
CLPTM1LQ96KA5 AC009533.2-201ENST00000543664 586 ntBASIC15.77■□□□□ 0.12
CLPTM1LQ96KA5 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.11
CLPTM1LQ96KA5 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms