Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC14.24□□□□□ -0.13
UBA52P62987 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
UBA52P62987 SLC9A7P1-201ENST00000554295 3311 ntBASIC14.24□□□□□ -0.13
UBA52P62987 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
UBA52P62987 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC14.24□□□□□ -0.13
UBA52P62987 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
UBA52P62987 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
UBA52P62987 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC14.24□□□□□ -0.13
UBA52P62987 AC092053.1-201ENST00000605787 1936 ntBASIC14.24□□□□□ -0.13
UBA52P62987 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
UBA52P62987 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
UBA52P62987 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
UBA52P62987 BEX3-201ENST00000361298 921 ntTSL 2 BASIC14.24□□□□□ -0.13
UBA52P62987 PMS2P2-201ENST00000425039 1128 ntBASIC14.24□□□□□ -0.13
UBA52P62987 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC14.24□□□□□ -0.13
UBA52P62987 AC004967.1-201ENST00000453589 447 ntBASIC14.24□□□□□ -0.13
UBA52P62987 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC14.24□□□□□ -0.13
UBA52P62987 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
UBA52P62987 AC112482.1-201ENST00000492080 688 ntBASIC14.24□□□□□ -0.13
UBA52P62987 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
UBA52P62987 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
UBA52P62987 AP000867.4-201ENST00000641616 219 ntBASIC14.24□□□□□ -0.13
UBA52P62987 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
UBA52P62987 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
UBA52P62987 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
UBA52P62987 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
UBA52P62987 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
UBA52P62987 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
UBA52P62987 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC14.24□□□□□ -0.13
UBA52P62987 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
UBA52P62987 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC14.24□□□□□ -0.13
UBA52P62987 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC14.24□□□□□ -0.13
UBA52P62987 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
UBA52P62987 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
UBA52P62987 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
UBA52P62987 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
UBA52P62987 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
UBA52P62987 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
UBA52P62987 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
UBA52P62987 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC14.23□□□□□ -0.13
UBA52P62987 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
UBA52P62987 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC14.23□□□□□ -0.13
UBA52P62987 AC006538.1-201ENST00000567905 1585 ntBASIC14.23□□□□□ -0.13
UBA52P62987 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
UBA52P62987 AC009949.1-201ENST00000623048 1830 ntBASIC14.23□□□□□ -0.13
UBA52P62987 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
UBA52P62987 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
UBA52P62987 PMP22-202ENST00000395936 816 ntTSL 3 BASIC14.23□□□□□ -0.13
UBA52P62987 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC14.23□□□□□ -0.13
UBA52P62987 CRCP-205ENST00000431089 942 ntTSL 2 BASIC14.23□□□□□ -0.13
UBA52P62987 AC007967.2-201ENST00000432613 625 ntBASIC14.23□□□□□ -0.13
UBA52P62987 DDX43P3-201ENST00000441064 443 ntBASIC14.23□□□□□ -0.13
UBA52P62987 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
UBA52P62987 URGCP-206ENST00000446958 365 ntTSL 2 BASIC14.23□□□□□ -0.13
UBA52P62987 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
UBA52P62987 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC14.23□□□□□ -0.13
UBA52P62987 AC002347.1-201ENST00000569543 541 ntBASIC14.23□□□□□ -0.13
UBA52P62987 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC14.23□□□□□ -0.13
UBA52P62987 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC14.23□□□□□ -0.13
UBA52P62987 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
UBA52P62987 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC14.23□□□□□ -0.13
UBA52P62987 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.23□□□□□ -0.13
UBA52P62987 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
UBA52P62987 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
UBA52P62987 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
UBA52P62987 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC14.23□□□□□ -0.13
UBA52P62987 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
UBA52P62987 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
UBA52P62987 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC14.23□□□□□ -0.13
UBA52P62987 AC132938.6-201ENST00000623828 1655 ntBASIC14.23□□□□□ -0.13
UBA52P62987 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC14.23□□□□□ -0.13
UBA52P62987 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
UBA52P62987 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
UBA52P62987 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
UBA52P62987 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC14.23□□□□□ -0.13
UBA52P62987 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
UBA52P62987 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC14.22□□□□□ -0.13
UBA52P62987 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC14.22□□□□□ -0.13
UBA52P62987 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC14.22□□□□□ -0.13
UBA52P62987 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
UBA52P62987 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC14.22□□□□□ -0.13
UBA52P62987 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
UBA52P62987 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC14.22□□□□□ -0.13
UBA52P62987 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
UBA52P62987 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
UBA52P62987 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC14.22□□□□□ -0.13
UBA52P62987 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC14.22□□□□□ -0.13
UBA52P62987 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC14.22□□□□□ -0.13
UBA52P62987 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
UBA52P62987 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
UBA52P62987 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC14.22□□□□□ -0.13
UBA52P62987 AC004832.2-201ENST00000426397 482 ntBASIC14.22□□□□□ -0.13
UBA52P62987 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC14.22□□□□□ -0.13
UBA52P62987 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC14.22□□□□□ -0.13
UBA52P62987 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
UBA52P62987 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC14.22□□□□□ -0.13
UBA52P62987 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC14.22□□□□□ -0.13
UBA52P62987 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.22□□□□□ -0.13
UBA52P62987 MIR1199-201ENST00000621445 119 ntBASIC14.22□□□□□ -0.13
UBA52P62987 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms