Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
PTPN3P26045 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PTPN3P26045 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC16.71■□□□□ 0.27
PTPN3P26045 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC16.71■□□□□ 0.27
PTPN3P26045 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PTPN3P26045 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PTPN3P26045 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
PTPN3P26045 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.71■□□□□ 0.27
PTPN3P26045 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.71■□□□□ 0.27
PTPN3P26045 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PTPN3P26045 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.71■□□□□ 0.27
PTPN3P26045 NARF-206ENST00000457415 1668 ntTSL 5 BASIC16.71■□□□□ 0.27
PTPN3P26045 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PTPN3P26045 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PTPN3P26045 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.71■□□□□ 0.27
PTPN3P26045 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PTPN3P26045 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
PTPN3P26045 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
PTPN3P26045 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.71■□□□□ 0.26
PTPN3P26045 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.71■□□□□ 0.26
PTPN3P26045 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
PTPN3P26045 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC16.7■□□□□ 0.26
PTPN3P26045 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC16.7■□□□□ 0.26
PTPN3P26045 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PTPN3P26045 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PTPN3P26045 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PTPN3P26045 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.7■□□□□ 0.26
PTPN3P26045 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.7■□□□□ 0.26
PTPN3P26045 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PTPN3P26045 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
PTPN3P26045 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PTPN3P26045 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.7■□□□□ 0.26
PTPN3P26045 AC022188.1-201ENST00000620960 1664 ntBASIC16.7■□□□□ 0.26
PTPN3P26045 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
PTPN3P26045 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.7■□□□□ 0.26
PTPN3P26045 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PTPN3P26045 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PTPN3P26045 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
PTPN3P26045 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PTPN3P26045 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PTPN3P26045 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PTPN3P26045 AP000347.1-202ENST00000435868 847 ntBASIC16.7■□□□□ 0.26
PTPN3P26045 PRYP6-201ENST00000514804 343 ntBASIC16.7■□□□□ 0.26
PTPN3P26045 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC16.7■□□□□ 0.26
PTPN3P26045 RARRES2P8-201ENST00000566335 367 ntBASIC16.7■□□□□ 0.26
PTPN3P26045 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PTPN3P26045 AC092902.6-201ENST00000641783 218 ntBASIC16.7■□□□□ 0.26
PTPN3P26045 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PTPN3P26045 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PTPN3P26045 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PTPN3P26045 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PTPN3P26045 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PTPN3P26045 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PTPN3P26045 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
PTPN3P26045 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
PTPN3P26045 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PTPN3P26045 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
PTPN3P26045 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.7■□□□□ 0.26
PTPN3P26045 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PTPN3P26045 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
PTPN3P26045 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PTPN3P26045 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
PTPN3P26045 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.69■□□□□ 0.26
PTPN3P26045 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
PTPN3P26045 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
PTPN3P26045 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
PTPN3P26045 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.69■□□□□ 0.26
PTPN3P26045 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PTPN3P26045 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PTPN3P26045 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.69■□□□□ 0.26
PTPN3P26045 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
PTPN3P26045 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PTPN3P26045 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
PTPN3P26045 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
PTPN3P26045 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
PTPN3P26045 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
PTPN3P26045 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PTPN3P26045 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PTPN3P26045 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PTPN3P26045 MCCD1P2-201ENST00000423228 335 ntBASIC16.69■□□□□ 0.26
PTPN3P26045 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC16.69■□□□□ 0.26
PTPN3P26045 FAM58CP-201ENST00000435741 640 ntBASIC16.69■□□□□ 0.26
PTPN3P26045 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PTPN3P26045 AC002347.1-201ENST00000569543 541 ntBASIC16.69■□□□□ 0.26
PTPN3P26045 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC16.69■□□□□ 0.26
PTPN3P26045 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
PTPN3P26045 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC16.69■□□□□ 0.26
PTPN3P26045 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PTPN3P26045 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PTPN3P26045 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
PTPN3P26045 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PTPN3P26045 AC010491.1-201ENST00000563101 2797 ntBASIC16.69■□□□□ 0.26
PTPN3P26045 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
PTPN3P26045 AC008894.3-201ENST00000624324 3103 ntBASIC16.69■□□□□ 0.26
PTPN3P26045 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
PTPN3P26045 NFIC-211ENST00000641145 8399 ntBASIC16.69■□□□□ 0.26
PTPN3P26045 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.69■□□□□ 0.26
PTPN3P26045 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.69■□□□□ 0.26
PTPN3P26045 BSG-215ENST00000618006 1329 ntTSL 2 BASIC16.69■□□□□ 0.26
PTPN3P26045 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms