Protein–RNA interactions for Protein: A8K7I4

CLCA1, Calcium-activated chloride channel regulator 1, humanhuman

Predictions only

Length 914 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA1A8K7I4 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLCA1A8K7I4 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
CLCA1A8K7I4 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC15.4■□□□□ 0.06
CLCA1A8K7I4 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.4■□□□□ 0.06
CLCA1A8K7I4 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC15.4■□□□□ 0.06
CLCA1A8K7I4 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLCA1A8K7I4 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
CLCA1A8K7I4 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
CLCA1A8K7I4 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
CLCA1A8K7I4 UPF3AP3-201ENST00000420996 769 ntBASIC15.4■□□□□ 0.06
CLCA1A8K7I4 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CLCA1A8K7I4 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC15.4■□□□□ 0.06
CLCA1A8K7I4 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC15.4■□□□□ 0.06
CLCA1A8K7I4 RIN3-211ENST00000557762 517 ntTSL 3 BASIC15.4■□□□□ 0.06
CLCA1A8K7I4 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC15.4■□□□□ 0.06
CLCA1A8K7I4 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
CLCA1A8K7I4 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC15.4■□□□□ 0.06
CLCA1A8K7I4 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
CLCA1A8K7I4 AC010327.4-202ENST00000591484 748 ntBASIC15.4■□□□□ 0.06
CLCA1A8K7I4 AC010654.1-201ENST00000615722 808 ntBASIC15.4■□□□□ 0.06
CLCA1A8K7I4 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLCA1A8K7I4 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CLCA1A8K7I4 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CLCA1A8K7I4 FES-204ENST00000414248 2327 ntTSL 2 BASIC15.4■□□□□ 0.06
CLCA1A8K7I4 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
CLCA1A8K7I4 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC15.4■□□□□ 0.06
CLCA1A8K7I4 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLCA1A8K7I4 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLCA1A8K7I4 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
CLCA1A8K7I4 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLCA1A8K7I4 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
CLCA1A8K7I4 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
CLCA1A8K7I4 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
CLCA1A8K7I4 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLCA1A8K7I4 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
CLCA1A8K7I4 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
CLCA1A8K7I4 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC15.39■□□□□ 0.05
CLCA1A8K7I4 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC15.39■□□□□ 0.05
CLCA1A8K7I4 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CLCA1A8K7I4 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLCA1A8K7I4 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLCA1A8K7I4 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLCA1A8K7I4 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC15.39■□□□□ 0.05
CLCA1A8K7I4 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLCA1A8K7I4 DBET-201ENST00000630918 3363 ntBASIC15.39■□□□□ 0.05
CLCA1A8K7I4 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLCA1A8K7I4 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
CLCA1A8K7I4 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC15.39■□□□□ 0.05
CLCA1A8K7I4 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLCA1A8K7I4 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC15.39■□□□□ 0.05
CLCA1A8K7I4 IMP4-203ENST00000409935 958 ntTSL 5 BASIC15.39■□□□□ 0.05
CLCA1A8K7I4 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC15.39■□□□□ 0.05
CLCA1A8K7I4 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC15.39■□□□□ 0.05
CLCA1A8K7I4 CIPC-205ENST00000555437 566 ntTSL 3 BASIC15.39■□□□□ 0.05
CLCA1A8K7I4 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC15.39■□□□□ 0.05
CLCA1A8K7I4 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC15.39■□□□□ 0.05
CLCA1A8K7I4 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC15.39■□□□□ 0.05
CLCA1A8K7I4 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
CLCA1A8K7I4 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC15.39■□□□□ 0.05
CLCA1A8K7I4 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLCA1A8K7I4 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC15.39■□□□□ 0.05
CLCA1A8K7I4 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLCA1A8K7I4 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CLCA1A8K7I4 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
CLCA1A8K7I4 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC15.39■□□□□ 0.05
CLCA1A8K7I4 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CLCA1A8K7I4 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC15.39■□□□□ 0.05
CLCA1A8K7I4 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.39■□□□□ 0.05
CLCA1A8K7I4 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLCA1A8K7I4 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC15.39■□□□□ 0.05
CLCA1A8K7I4 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC15.39■□□□□ 0.05
CLCA1A8K7I4 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLCA1A8K7I4 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CLCA1A8K7I4 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLCA1A8K7I4 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLCA1A8K7I4 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CLCA1A8K7I4 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CLCA1A8K7I4 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CLCA1A8K7I4 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
CLCA1A8K7I4 AL596087.1-201ENST00000400979 1969 ntBASIC15.38■□□□□ 0.05
CLCA1A8K7I4 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
CLCA1A8K7I4 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
CLCA1A8K7I4 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CLCA1A8K7I4 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
CLCA1A8K7I4 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CLCA1A8K7I4 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CLCA1A8K7I4 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CLCA1A8K7I4 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15.38■□□□□ 0.05
CLCA1A8K7I4 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CLCA1A8K7I4 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CLCA1A8K7I4 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC15.38■□□□□ 0.05
CLCA1A8K7I4 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CLCA1A8K7I4 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CLCA1A8K7I4 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.38■□□□□ 0.05
CLCA1A8K7I4 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.38■□□□□ 0.05
CLCA1A8K7I4 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
CLCA1A8K7I4 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC15.38■□□□□ 0.05
CLCA1A8K7I4 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CLCA1A8K7I4 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CLCA1A8K7I4 ATP6V0CP3-201ENST00000417255 467 ntBASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms