Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC15.33■□□□□ 0.04
TRBV5-3A0A0A0MS03 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC15.33■□□□□ 0.04
TRBV5-3A0A0A0MS03 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC15.33■□□□□ 0.04
TRBV5-3A0A0A0MS03 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC15.33■□□□□ 0.04
TRBV5-3A0A0A0MS03 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRBV5-3A0A0A0MS03 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC15.33■□□□□ 0.04
TRBV5-3A0A0A0MS03 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRBV5-3A0A0A0MS03 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRBV5-3A0A0A0MS03 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRBV5-3A0A0A0MS03 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRBV5-3A0A0A0MS03 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
TRBV5-3A0A0A0MS03 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
TRBV5-3A0A0A0MS03 GSN-206ENST00000394353 2311 ntTSL 2 BASIC15.33■□□□□ 0.04
TRBV5-3A0A0A0MS03 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRBV5-3A0A0A0MS03 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRBV5-3A0A0A0MS03 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRBV5-3A0A0A0MS03 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRBV5-3A0A0A0MS03 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.33■□□□□ 0.04
TRBV5-3A0A0A0MS03 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRBV5-3A0A0A0MS03 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC15.33■□□□□ 0.04
TRBV5-3A0A0A0MS03 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV5-3A0A0A0MS03 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.32■□□□□ 0.04
TRBV5-3A0A0A0MS03 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC15.32■□□□□ 0.04
TRBV5-3A0A0A0MS03 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV5-3A0A0A0MS03 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV5-3A0A0A0MS03 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC15.32■□□□□ 0.04
TRBV5-3A0A0A0MS03 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV5-3A0A0A0MS03 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV5-3A0A0A0MS03 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV5-3A0A0A0MS03 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC15.32■□□□□ 0.04
TRBV5-3A0A0A0MS03 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.32■□□□□ 0.04
TRBV5-3A0A0A0MS03 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV5-3A0A0A0MS03 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV5-3A0A0A0MS03 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV5-3A0A0A0MS03 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV5-3A0A0A0MS03 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV5-3A0A0A0MS03 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
TRBV5-3A0A0A0MS03 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV5-3A0A0A0MS03 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV5-3A0A0A0MS03 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC15.32■□□□□ 0.04
TRBV5-3A0A0A0MS03 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV5-3A0A0A0MS03 KRT18P67-201ENST00000432816 1264 ntBASIC15.32■□□□□ 0.04
TRBV5-3A0A0A0MS03 FAM197Y8-203ENST00000450145 560 ntBASIC15.32■□□□□ 0.04
TRBV5-3A0A0A0MS03 MOK-208ENST00000519058 917 ntTSL 2 BASIC15.32■□□□□ 0.04
TRBV5-3A0A0A0MS03 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
TRBV5-3A0A0A0MS03 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
TRBV5-3A0A0A0MS03 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV5-3A0A0A0MS03 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC15.32■□□□□ 0.04
TRBV5-3A0A0A0MS03 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC15.32■□□□□ 0.04
TRBV5-3A0A0A0MS03 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC15.32■□□□□ 0.04
TRBV5-3A0A0A0MS03 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
TRBV5-3A0A0A0MS03 AC148477.8-201ENST00000624298 468 ntBASIC15.32■□□□□ 0.04
TRBV5-3A0A0A0MS03 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
TRBV5-3A0A0A0MS03 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV5-3A0A0A0MS03 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV5-3A0A0A0MS03 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC15.32■□□□□ 0.04
TRBV5-3A0A0A0MS03 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV5-3A0A0A0MS03 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV5-3A0A0A0MS03 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV5-3A0A0A0MS03 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV5-3A0A0A0MS03 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV5-3A0A0A0MS03 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV5-3A0A0A0MS03 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
TRBV5-3A0A0A0MS03 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
TRBV5-3A0A0A0MS03 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV5-3A0A0A0MS03 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC15.32■□□□□ 0.04
TRBV5-3A0A0A0MS03 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV5-3A0A0A0MS03 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
TRBV5-3A0A0A0MS03 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV5-3A0A0A0MS03 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV5-3A0A0A0MS03 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC15.31■□□□□ 0.04
TRBV5-3A0A0A0MS03 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRBV5-3A0A0A0MS03 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRBV5-3A0A0A0MS03 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRBV5-3A0A0A0MS03 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRBV5-3A0A0A0MS03 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRBV5-3A0A0A0MS03 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
TRBV5-3A0A0A0MS03 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRBV5-3A0A0A0MS03 PKD1P1-201ENST00000458669 6805 ntBASIC15.31■□□□□ 0.04
TRBV5-3A0A0A0MS03 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRBV5-3A0A0A0MS03 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.31■□□□□ 0.04
TRBV5-3A0A0A0MS03 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRBV5-3A0A0A0MS03 AL109954.1-202ENST00000564051 2148 ntBASIC15.31■□□□□ 0.04
TRBV5-3A0A0A0MS03 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC15.31■□□□□ 0.04
TRBV5-3A0A0A0MS03 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC15.31■□□□□ 0.04
TRBV5-3A0A0A0MS03 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRBV5-3A0A0A0MS03 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
TRBV5-3A0A0A0MS03 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC15.31■□□□□ 0.04
TRBV5-3A0A0A0MS03 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
TRBV5-3A0A0A0MS03 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
TRBV5-3A0A0A0MS03 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
TRBV5-3A0A0A0MS03 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
TRBV5-3A0A0A0MS03 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC15.31■□□□□ 0.04
TRBV5-3A0A0A0MS03 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC15.31■□□□□ 0.04
TRBV5-3A0A0A0MS03 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
TRBV5-3A0A0A0MS03 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
TRBV5-3A0A0A0MS03 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
TRBV5-3A0A0A0MS03 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC15.31■□□□□ 0.04
TRBV5-3A0A0A0MS03 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC15.31■□□□□ 0.04
TRBV5-3A0A0A0MS03 AL513480.1-201ENST00000451731 511 ntBASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms