Protein–RNA interactions for Protein: O95833

CLIC3, Chloride intracellular channel protein 3, humanhuman

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC3O95833 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CLIC3O95833 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CLIC3O95833 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLIC3O95833 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLIC3O95833 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLIC3O95833 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC15.23■□□□□ 0.03
CLIC3O95833 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLIC3O95833 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CLIC3O95833 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CLIC3O95833 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC15.22■□□□□ 0.03
CLIC3O95833 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLIC3O95833 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC15.22■□□□□ 0.03
CLIC3O95833 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
CLIC3O95833 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
CLIC3O95833 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
CLIC3O95833 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CLIC3O95833 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC15.22■□□□□ 0.03
CLIC3O95833 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CLIC3O95833 AC091951.1-201ENST00000512854 2465 ntBASIC15.22■□□□□ 0.03
CLIC3O95833 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLIC3O95833 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLIC3O95833 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLIC3O95833 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLIC3O95833 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLIC3O95833 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CLIC3O95833 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CLIC3O95833 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLIC3O95833 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CLIC3O95833 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CLIC3O95833 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLIC3O95833 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLIC3O95833 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC15.22■□□□□ 0.03
CLIC3O95833 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLIC3O95833 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC15.22■□□□□ 0.03
CLIC3O95833 KRT18P21-201ENST00000515767 1272 ntBASIC15.22■□□□□ 0.03
CLIC3O95833 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC15.22■□□□□ 0.03
CLIC3O95833 CD320-202ENST00000537716 1119 ntTSL 2 BASIC15.22■□□□□ 0.03
CLIC3O95833 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
CLIC3O95833 AL353801.3-201ENST00000609898 542 ntBASIC15.22■□□□□ 0.03
CLIC3O95833 WDR6-223ENST00000627177 207 ntTSL 2 BASIC15.22■□□□□ 0.03
CLIC3O95833 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLIC3O95833 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CLIC3O95833 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
CLIC3O95833 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
CLIC3O95833 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CLIC3O95833 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.22■□□□□ 0.03
CLIC3O95833 AC243591.1-201ENST00000452967 1364 ntBASIC15.22■□□□□ 0.03
CLIC3O95833 LINC01568-207ENST00000641790 1380 ntBASIC15.22■□□□□ 0.03
CLIC3O95833 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC15.22■□□□□ 0.03
CLIC3O95833 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLIC3O95833 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLIC3O95833 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC15.22■□□□□ 0.03
CLIC3O95833 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CLIC3O95833 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CLIC3O95833 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLIC3O95833 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLIC3O95833 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
CLIC3O95833 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC15.21■□□□□ 0.03
CLIC3O95833 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC15.21■□□□□ 0.03
CLIC3O95833 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CLIC3O95833 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLIC3O95833 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLIC3O95833 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC15.21■□□□□ 0.03
CLIC3O95833 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLIC3O95833 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
CLIC3O95833 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLIC3O95833 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
CLIC3O95833 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC15.21■□□□□ 0.03
CLIC3O95833 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC15.21■□□□□ 0.03
CLIC3O95833 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC15.21■□□□□ 0.03
CLIC3O95833 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
CLIC3O95833 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CLIC3O95833 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC15.21■□□□□ 0.03
CLIC3O95833 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC15.21■□□□□ 0.03
CLIC3O95833 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC15.21■□□□□ 0.03
CLIC3O95833 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLIC3O95833 SRP19-202ENST00000445150 833 ntTSL 2 BASIC15.21■□□□□ 0.03
CLIC3O95833 POU5F1P6-201ENST00000466990 990 ntBASIC15.21■□□□□ 0.03
CLIC3O95833 RN7SL606P-201ENST00000472779 293 ntBASIC15.21■□□□□ 0.03
CLIC3O95833 GUSBP12-201ENST00000513727 720 ntBASIC15.21■□□□□ 0.03
CLIC3O95833 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC15.21■□□□□ 0.03
CLIC3O95833 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC15.21■□□□□ 0.03
CLIC3O95833 AC004817.3-201ENST00000602957 2129 ntBASIC15.21■□□□□ 0.03
CLIC3O95833 AC124864.1-201ENST00000623408 392 ntBASIC15.21■□□□□ 0.03
CLIC3O95833 AC011558.1-201ENST00000623459 338 ntBASIC15.21■□□□□ 0.03
CLIC3O95833 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CLIC3O95833 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CLIC3O95833 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CLIC3O95833 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
CLIC3O95833 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
CLIC3O95833 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.02
CLIC3O95833 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
CLIC3O95833 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
CLIC3O95833 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CLIC3O95833 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CLIC3O95833 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CLIC3O95833 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CLIC3O95833 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CLIC3O95833 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC15.2■□□□□ 0.02
CLIC3O95833 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms