Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC8.32□□□□□ -1.08
CDC42SE1Q9NRR8 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC8.32□□□□□ -1.08
CDC42SE1Q9NRR8 USP22-206ENST00000537526 4976 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
CDC42SE1Q9NRR8 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
CDC42SE1Q9NRR8 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC8.32□□□□□ -1.08
CDC42SE1Q9NRR8 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC8.32□□□□□ -1.08
CDC42SE1Q9NRR8 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
CDC42SE1Q9NRR8 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC8.32□□□□□ -1.08
CDC42SE1Q9NRR8 PCF11-201ENST00000298281 7677 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
CDC42SE1Q9NRR8 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC8.32□□□□□ -1.08
CDC42SE1Q9NRR8 GFRA1-204ENST00000439649 9216 ntAPPRIS P3 TSL 2 BASIC8.32□□□□□ -1.08
CDC42SE1Q9NRR8 TECTA-201ENST00000264037 6468 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
CDC42SE1Q9NRR8 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC8.32□□□□□ -1.08
CDC42SE1Q9NRR8 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
CDC42SE1Q9NRR8 TNS1-205ENST00000419504 5921 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
CDC42SE1Q9NRR8 TNS1-207ENST00000430930 5900 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
CDC42SE1Q9NRR8 ATP11A-201ENST00000375630 8768 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
CDC42SE1Q9NRR8 CXCL5-201ENST00000296027 2538 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
CDC42SE1Q9NRR8 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
CDC42SE1Q9NRR8 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC8.32□□□□□ -1.08
CDC42SE1Q9NRR8 HSPA2-201ENST00000247207 2767 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
CDC42SE1Q9NRR8 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
CDC42SE1Q9NRR8 LHCGR-201ENST00000294954 3044 ntAPPRIS P2 TSL 1 (best) BASIC8.32□□□□□ -1.08
CDC42SE1Q9NRR8 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
CDC42SE1Q9NRR8 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC8.32□□□□□ -1.08
CDC42SE1Q9NRR8 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC8.32□□□□□ -1.08
CDC42SE1Q9NRR8 FLNA-204ENST00000369856 8241 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
CDC42SE1Q9NRR8 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
CDC42SE1Q9NRR8 AC012435.1-201ENST00000563287 3385 ntTSL 2 BASIC8.31□□□□□ -1.08
CDC42SE1Q9NRR8 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC8.31□□□□□ -1.08
CDC42SE1Q9NRR8 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
CDC42SE1Q9NRR8 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
CDC42SE1Q9NRR8 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
CDC42SE1Q9NRR8 LINC00893-215ENST00000618757 2347 ntTSL 2 BASIC8.31□□□□□ -1.08
CDC42SE1Q9NRR8 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
CDC42SE1Q9NRR8 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
CDC42SE1Q9NRR8 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
CDC42SE1Q9NRR8 ERVK13-1-205ENST00000568395 5578 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
CDC42SE1Q9NRR8 P2RY8-201ENST00000381297 4198 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
CDC42SE1Q9NRR8 SLC25A25-203ENST00000373068 3431 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
CDC42SE1Q9NRR8 PDZD4-209ENST00000544474 3418 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
CDC42SE1Q9NRR8 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
CDC42SE1Q9NRR8 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
CDC42SE1Q9NRR8 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC8.31□□□□□ -1.08
CDC42SE1Q9NRR8 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
CDC42SE1Q9NRR8 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
CDC42SE1Q9NRR8 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
CDC42SE1Q9NRR8 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
CDC42SE1Q9NRR8 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
CDC42SE1Q9NRR8 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC8.31□□□□□ -1.08
CDC42SE1Q9NRR8 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC8.31□□□□□ -1.08
CDC42SE1Q9NRR8 ATG16L1-202ENST00000373525 2767 ntTSL 5 BASIC8.31□□□□□ -1.08
CDC42SE1Q9NRR8 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC8.31□□□□□ -1.08
CDC42SE1Q9NRR8 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
CDC42SE1Q9NRR8 GPR161-208ENST00000537209 8256 ntTSL 2 BASIC8.31□□□□□ -1.08
CDC42SE1Q9NRR8 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
CDC42SE1Q9NRR8 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
CDC42SE1Q9NRR8 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
CDC42SE1Q9NRR8 LSINCT5-201ENST00000626215 2647 ntBASIC8.31□□□□□ -1.08
CDC42SE1Q9NRR8 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC8.31□□□□□ -1.08
CDC42SE1Q9NRR8 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC8.31□□□□□ -1.08
CDC42SE1Q9NRR8 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
CDC42SE1Q9NRR8 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
CDC42SE1Q9NRR8 GATAD2A-201ENST00000358713 5510 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
CDC42SE1Q9NRR8 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC8.31□□□□□ -1.08
CDC42SE1Q9NRR8 TSPY21P-201ENST00000433481 731 ntBASIC8.31□□□□□ -1.08
CDC42SE1Q9NRR8 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC8.31□□□□□ -1.08
CDC42SE1Q9NRR8 LONRF2P2-201ENST00000439212 571 ntBASIC8.31□□□□□ -1.08
CDC42SE1Q9NRR8 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
CDC42SE1Q9NRR8 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
CDC42SE1Q9NRR8 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
CDC42SE1Q9NRR8 AC092437.1-201ENST00000624794 1048 ntBASIC8.31□□□□□ -1.08
CDC42SE1Q9NRR8 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC8.31□□□□□ -1.08
CDC42SE1Q9NRR8 PERM1-202ENST00000433179 3340 ntAPPRIS P2 TSL 5 BASIC8.31□□□□□ -1.08
CDC42SE1Q9NRR8 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
CDC42SE1Q9NRR8 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
CDC42SE1Q9NRR8 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC8.31□□□□□ -1.08
CDC42SE1Q9NRR8 STRC-213ENST00000541030 5305 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
CDC42SE1Q9NRR8 AL358334.2-201ENST00000553648 4714 ntTSL 2 BASIC8.31□□□□□ -1.08
CDC42SE1Q9NRR8 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC8.31□□□□□ -1.08
CDC42SE1Q9NRR8 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
CDC42SE1Q9NRR8 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC8.31□□□□□ -1.08
CDC42SE1Q9NRR8 SDC3-201ENST00000336798 6392 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
CDC42SE1Q9NRR8 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
CDC42SE1Q9NRR8 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
CDC42SE1Q9NRR8 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
CDC42SE1Q9NRR8 GAS2L1P1-201ENST00000420145 1480 ntBASIC8.31□□□□□ -1.08
CDC42SE1Q9NRR8 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
CDC42SE1Q9NRR8 AC018553.1-201ENST00000616682 1458 ntBASIC8.31□□□□□ -1.08
CDC42SE1Q9NRR8 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
CDC42SE1Q9NRR8 F2RL3-201ENST00000248076 3473 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
CDC42SE1Q9NRR8 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC8.31□□□□□ -1.08
CDC42SE1Q9NRR8 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC8.31□□□□□ -1.08
CDC42SE1Q9NRR8 TP73-207ENST00000378290 1831 ntTSL 2 BASIC8.31□□□□□ -1.08
CDC42SE1Q9NRR8 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC8.31□□□□□ -1.08
CDC42SE1Q9NRR8 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
CDC42SE1Q9NRR8 DYSF-206ENST00000409744 6564 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
CDC42SE1Q9NRR8 DYSF-209ENST00000410041 6594 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
CDC42SE1Q9NRR8 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC8.31□□□□□ -1.08
CDC42SE1Q9NRR8 OCA2-201ENST00000353809 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms