RNA–Protein interactions for RNA: ENST00000296027.4

CXCL5-201, Transcript of C-X-C motif chemokine ligand 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL5, Length 2,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL5-201ENST00000296027 NISCHQ9Y2I1 1504 aa27.26■■□□□ 1.96
CXCL5-201ENST00000296027 SHROOM4Q9ULL8 1493 aa23.46■■□□□ 1.35
CXCL5-201ENST00000296027 ZCCHC6Q5VYS8 1495 aaKnown RBP23.03■■□□□ 1.28
CXCL5-201ENST00000296027 SUPT5HO00267 1087 aaKnown RBP23.03■■□□□ 1.28
CXCL5-201ENST00000296027 CCDC180Q9P1Z9 1646 aa23.01■■□□□ 1.27
CXCL5-201ENST00000296027 DCAF8L2P0C7V8 631 aa22.88■■□□□ 1.25
CXCL5-201ENST00000296027 CHIC1Q5VXU3 224 aa22.31■■□□□ 1.16
CXCL5-201ENST00000296027 DCAF1Q9Y4B6 1507 aa22.27■■□□□ 1.15
CXCL5-201ENST00000296027 MYO15BQ96JP2 1530 aa22.2■■□□□ 1.14
CXCL5-201ENST00000296027 PELP1Q8IZL8 1130 aaKnown RBP21.78■■□□□ 1.08
CXCL5-201ENST00000296027 SCRIBQ14160 1630 aa21.75■■□□□ 1.07
CXCL5-201ENST00000296027 LOC105371045A0A1W2PR82 267 aa21.75■■□□□ 1.07
CXCL5-201ENST00000296027 PCGF6Q9BYE7 350 aa21.7■■□□□ 1.06
CXCL5-201ENST00000296027 ABCC9O60706 1549 aa21.7■■□□□ 1.06
CXCL5-201ENST00000296027 RSF1Q96T23 1441 aaPredicted RBP21.64■■□□□ 1.05
CXCL5-201ENST00000296027 HRCP23327 699 aa21.61■■□□□ 1.05
CXCL5-201ENST00000296027 MYT1Q01538 1121 aa21.59■■□□□ 1.05
CXCL5-201ENST00000296027 TRIM41Q8WV44 630 aa21.39■■□□□ 1.01
CXCL5-201ENST00000296027 RB1CC1Q8TDY2 1594 aa21.37■■□□□ 1.01
CXCL5-201ENST00000296027 NACADO15069 1562 aa21.36■■□□□ 1.01
CXCL5-201ENST00000296027 CECR2Q9BXF3 1484 aa21.36■■□□□ 1.01
CXCL5-201ENST00000296027 FAM9AQ8IZU1 332 aaPredicted RBP21.31■■□□□ 1
CXCL5-201ENST00000296027 PPARGC1BQ86YN6 1023 aaKnown RBP21.28■■□□□ 1
CXCL5-201ENST00000296027 MROH2BQ7Z745 1585 aa21.24■□□□□ 0.99
CXCL5-201ENST00000296027 EHMT2Q96KQ7 1210 aa21.2■□□□□ 0.98
CXCL5-201ENST00000296027 TRIM26Q12899 539 aaPredicted RBP21.19■□□□□ 0.98
CXCL5-201ENST00000296027 WIZO95785 1651 aa21.1■□□□□ 0.97
CXCL5-201ENST00000296027 BAZ1AQ9NRL2 1556 aaPredicted RBP20.9■□□□□ 0.94
CXCL5-201ENST00000296027 TTBK1Q5TCY1 1321 aaPredicted RBP20.87■□□□□ 0.93
CXCL5-201ENST00000296027 PABPN1Q86U42 306 aaKnown RBP eCLIP20.74■□□□□ 0.91
CXCL5-201ENST00000296027 EIF4G1Q04637 1599 aaKnown RBP20.73■□□□□ 0.91
CXCL5-201ENST00000296027 SMARCA4P51532 1647 aa20.72■□□□□ 0.91
CXCL5-201ENST00000296027 CCDC88BA6NC98 1476 aa20.72■□□□□ 0.91
CXCL5-201ENST00000296027 TOP2AP11388 1531 aaKnown RBP20.71■□□□□ 0.91
CXCL5-201ENST00000296027 ABCC8Q09428 1581 aa20.68■□□□□ 0.9
CXCL5-201ENST00000296027 UNC13AQ9UPW8 1703 aa20.67■□□□□ 0.9
CXCL5-201ENST00000296027 ZEB1P37275 1124 aaPredicted RBP20.66■□□□□ 0.9
CXCL5-201ENST00000296027 SMARCA2P51531 1590 aa20.63■□□□□ 0.89
CXCL5-201ENST00000296027 SOGA1O94964 1423 aa20.53■□□□□ 0.88
CXCL5-201ENST00000296027 BICRAQ9NZM4 1560 aa20.49■□□□□ 0.87
CXCL5-201ENST00000296027 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.44■□□□□ 0.86
CXCL5-201ENST00000296027 RUSC2Q8N2Y8 1516 aa20.44■□□□□ 0.86
CXCL5-201ENST00000296027 CSRNP3Q8WYN3 585 aa20.43■□□□□ 0.86
CXCL5-201ENST00000296027 UBTFP17480 764 aaKnown RBP20.4■□□□□ 0.86
CXCL5-201ENST00000296027 CEP162Q5TB80 1403 aa20.4■□□□□ 0.86
CXCL5-201ENST00000296027 CCER1Q8TC90 406 aaPredicted RBP20.35■□□□□ 0.85
CXCL5-201ENST00000296027 TNIKQ9UKE5 1360 aa20.34■□□□□ 0.85
CXCL5-201ENST00000296027 WRNQ14191 1432 aaPredicted RBP eCLIP20.32■□□□□ 0.84
CXCL5-201ENST00000296027 EEA1Q15075 1411 aa20.29■□□□□ 0.84
CXCL5-201ENST00000296027 PEG3Q9GZU2 1588 aa20.28■□□□□ 0.84
CXCL5-201ENST00000296027 ATAD2BQ9ULI0 1458 aa20.26■□□□□ 0.83
CXCL5-201ENST00000296027 PRKCSHP14314 528 aaPredicted RBP20.22■□□□□ 0.83
CXCL5-201ENST00000296027 GOLGA3Q08378 1498 aa20.2■□□□□ 0.82
CXCL5-201ENST00000296027 BAZ1BQ9UIG0 1483 aaKnown RBP20.2■□□□□ 0.82
CXCL5-201ENST00000296027 SYNJ1O43426 1573 aa20.18■□□□□ 0.82
CXCL5-201ENST00000296027 RANGAP1P46060 587 aaPredicted RBP20.1■□□□□ 0.81
CXCL5-201ENST00000296027 SLC24A1O60721 1099 aa20.09■□□□□ 0.81
CXCL5-201ENST00000296027 CEP164Q9UPV0 1460 aa20.08■□□□□ 0.8
CXCL5-201ENST00000296027 CLIP1P30622 1438 aa20.02■□□□□ 0.8
CXCL5-201ENST00000296027 RAPGEF2Q9Y4G8 1499 aa20■□□□□ 0.79
CXCL5-201ENST00000296027 KIF21BO75037 1637 aa19.98■□□□□ 0.79
CXCL5-201ENST00000296027 HNRNPUL2Q1KMD3 747 aaKnown RBP19.98■□□□□ 0.79
CXCL5-201ENST00000296027 ERICH6Q7L0X2 663 aa19.98■□□□□ 0.79
CXCL5-201ENST00000296027 SCAF1Q9H7N4 1312 aaKnown RBP19.95■□□□□ 0.78
CXCL5-201ENST00000296027 DIEXFQ68CQ4 756 aaKnown RBP19.93■□□□□ 0.78
CXCL5-201ENST00000296027 APLP2Q06481 763 aa19.9■□□□□ 0.78
CXCL5-201ENST00000296027 VPS8Q8N3P4 1428 aa19.9■□□□□ 0.78
CXCL5-201ENST00000296027 TOP2BQ02880 1626 aa19.88■□□□□ 0.77
CXCL5-201ENST00000296027 NCAPD3P42695 1498 aa19.83■□□□□ 0.77
CXCL5-201ENST00000296027 BIVM-ERCC5R4GMW8 1640 aa19.77■□□□□ 0.75
CXCL5-201ENST00000296027 ZNF316A6NFI3 1004 aaPredicted RBP19.76■□□□□ 0.75
CXCL5-201ENST00000296027 NEUROD1Q13562 356 aa19.76■□□□□ 0.75
CXCL5-201ENST00000296027 CUX1P39880 1505 aa19.75■□□□□ 0.75
CXCL5-201ENST00000296027 HMGXB3Q12766 1538 aa19.75■□□□□ 0.75
CXCL5-201ENST00000296027 PRXQ9BXM0 1461 aa19.75■□□□□ 0.75
CXCL5-201ENST00000296027 ACIN1Q9UKV3 1341 aaKnown RBP19.73■□□□□ 0.75
CXCL5-201ENST00000296027 KANK4Q5T7N3 995 aaPredicted RBP19.69■□□□□ 0.74
CXCL5-201ENST00000296027 CFTRP13569 1480 aa19.69■□□□□ 0.74
CXCL5-201ENST00000296027 KIF27Q86VH2 1401 aa19.68■□□□□ 0.74
CXCL5-201ENST00000296027 ERICH3Q5RHP9 1530 aa19.67■□□□□ 0.74
CXCL5-201ENST00000296027 ARAP1Q96P48 1450 aa19.66■□□□□ 0.74
CXCL5-201ENST00000296027 CENPBP07199 599 aaPredicted RBP19.59■□□□□ 0.73
CXCL5-201ENST00000296027 BCL11AQ9H165 835 aa19.55■□□□□ 0.72
CXCL5-201ENST00000296027 GTF3C3Q9Y5Q9 886 aa19.55■□□□□ 0.72
CXCL5-201ENST00000296027 MIER1Q8N108 512 aa19.53■□□□□ 0.72
CXCL5-201ENST00000296027 YTHDC1Q96MU7 727 aaKnown RBP19.53■□□□□ 0.72
CXCL5-201ENST00000296027 CUX2O14529 1486 aa19.52■□□□□ 0.72
CXCL5-201ENST00000296027 IGF1RP08069 1367 aa19.52■□□□□ 0.71
CXCL5-201ENST00000296027 ARHGAP35Q9NRY4 1499 aa19.51■□□□□ 0.71
CXCL5-201ENST00000296027 CADPSQ9ULU8 1353 aa19.51■□□□□ 0.71
CXCL5-201ENST00000296027 ITGAEP38570 1179 aa19.48■□□□□ 0.71
CXCL5-201ENST00000296027 DHX57Q6P158 1386 aaKnown RBP19.47■□□□□ 0.71
CXCL5-201ENST00000296027 CARMIL1Q5VZK9 1371 aa19.43■□□□□ 0.7
CXCL5-201ENST00000296027 RRBP1Q9P2E9 1410 aaKnown RBP19.42■□□□□ 0.7
CXCL5-201ENST00000296027 FGD5Q6ZNL6 1462 aa19.41■□□□□ 0.7
CXCL5-201ENST00000296027 CCNB3Q8WWL7 1395 aa19.4■□□□□ 0.7
CXCL5-201ENST00000296027 CLSPNQ9HAW4 1339 aa19.38■□□□□ 0.69
CXCL5-201ENST00000296027 P3H3Q8IVL6 736 aa19.38■□□□□ 0.69
CXCL5-201ENST00000296027 CC2D2AQ9P2K1 1620 aa19.33■□□□□ 0.69
CXCL5-201ENST00000296027 PRDM2Q13029 1718 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms