RNA–Protein interactions for RNA: ENST00000537526.6

USP22-206, Transcript of ubiquitin specific peptidase 22, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP22, Length 4,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP22-206ENST00000537526 NISCHQ9Y2I1 1504 aa22.71■■□□□ 1.23
USP22-206ENST00000537526 DCAF8L2P0C7V8 631 aa22.26■■□□□ 1.15
USP22-206ENST00000537526 SUPT5HO00267 1087 aaKnown RBP21.69■■□□□ 1.06
USP22-206ENST00000537526 SHROOM4Q9ULL8 1493 aa21.32■■□□□ 1
USP22-206ENST00000537526 PELP1Q8IZL8 1130 aaKnown RBP20.61■□□□□ 0.89
USP22-206ENST00000537526 PCGF6Q9BYE7 350 aa20.54■□□□□ 0.88
USP22-206ENST00000537526 EHMT2Q96KQ7 1210 aa20.49■□□□□ 0.87
USP22-206ENST00000537526 ZEB1P37275 1124 aaPredicted RBP20.48■□□□□ 0.87
USP22-206ENST00000537526 APLP2Q06481 763 aa20.46■□□□□ 0.87
USP22-206ENST00000537526 FAM9AQ8IZU1 332 aaPredicted RBP20.3■□□□□ 0.84
USP22-206ENST00000537526 TRIM41Q8WV44 630 aa20.24■□□□□ 0.83
USP22-206ENST00000537526 CENPBP07199 599 aaPredicted RBP20.18■□□□□ 0.82
USP22-206ENST00000537526 CCER1Q8TC90 406 aaPredicted RBP20.03■□□□□ 0.8
USP22-206ENST00000537526 TRIM26Q12899 539 aaPredicted RBP19.94■□□□□ 0.78
USP22-206ENST00000537526 HRCP23327 699 aa19.93■□□□□ 0.78
USP22-206ENST00000537526 TTBK1Q5TCY1 1321 aaPredicted RBP19.9■□□□□ 0.78
USP22-206ENST00000537526 CHIC1Q5VXU3 224 aa19.81■□□□□ 0.76
USP22-206ENST00000537526 UBTFP17480 764 aaKnown RBP19.8■□□□□ 0.76
USP22-206ENST00000537526 MYT1Q01538 1121 aa19.77■□□□□ 0.76
USP22-206ENST00000537526 RANGAP1P46060 587 aaPredicted RBP19.6■□□□□ 0.73
USP22-206ENST00000537526 ERICH6Q7L0X2 663 aa19.54■□□□□ 0.72
USP22-206ENST00000537526 LOC105371045A0A1W2PR82 267 aa19.51■□□□□ 0.71
USP22-206ENST00000537526 NEFLP07196 543 aa19.5■□□□□ 0.71
USP22-206ENST00000537526 ATP1B4Q9UN42 357 aaPredicted RBP19.42■□□□□ 0.7
USP22-206ENST00000537526 PPARGC1BQ86YN6 1023 aaKnown RBP19.41■□□□□ 0.7
USP22-206ENST00000537526 YTHDC1Q96MU7 727 aaKnown RBP19.41■□□□□ 0.7
USP22-206ENST00000537526 HNRNPUL2Q1KMD3 747 aaKnown RBP19.12■□□□□ 0.65
USP22-206ENST00000537526 DIEXFQ68CQ4 756 aaKnown RBP19.11■□□□□ 0.65
USP22-206ENST00000537526 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.06■□□□□ 0.64
USP22-206ENST00000537526 ITGAEP38570 1179 aa19■□□□□ 0.63
USP22-206ENST00000537526 ZCCHC6Q5VYS8 1495 aaKnown RBP18.93■□□□□ 0.62
USP22-206ENST00000537526 DCAF1Q9Y4B6 1507 aa18.89■□□□□ 0.61
USP22-206ENST00000537526 ABCC9O60706 1549 aa18.8■□□□□ 0.6
USP22-206ENST00000537526 ZNF316A6NFI3 1004 aaPredicted RBP18.77■□□□□ 0.59
USP22-206ENST00000537526 GTF3C3Q9Y5Q9 886 aa18.73■□□□□ 0.59
USP22-206ENST00000537526 DAXXQ9UER7 740 aaPredicted RBP18.71■□□□□ 0.59
USP22-206ENST00000537526 CCDC180Q9P1Z9 1646 aa18.71■□□□□ 0.59
USP22-206ENST00000537526 CSRNP3Q8WYN3 585 aa18.69■□□□□ 0.58
USP22-206ENST00000537526 ACIN1Q9UKV3 1341 aaKnown RBP18.67■□□□□ 0.58
USP22-206ENST00000537526 FAM50AQ14320 339 aaKnown RBP18.66■□□□□ 0.58
USP22-206ENST00000537526 POLR3GLQ9BT43 218 aa18.66■□□□□ 0.58
USP22-206ENST00000537526 PABPN1Q86U42 306 aaKnown RBP eCLIP18.58■□□□□ 0.56
USP22-206ENST00000537526 ANP32CO43423 234 aa18.56■□□□□ 0.56
USP22-206ENST00000537526 CLSPNQ9HAW4 1339 aa18.56■□□□□ 0.56
USP22-206ENST00000537526 NEUROD1Q13562 356 aa18.51■□□□□ 0.55
USP22-206ENST00000537526 RTL5Q5HYW3 569 aaPredicted RBP18.49■□□□□ 0.55
USP22-206ENST00000537526 TRIM52Q96A61 297 aa18.48■□□□□ 0.55
USP22-206ENST00000537526 SCRIBQ14160 1630 aa18.48■□□□□ 0.55
USP22-206ENST00000537526 MYT1LQ9UL68 1186 aa18.43■□□□□ 0.54
USP22-206ENST00000537526 CDK11AQ9UQ88 783 aaPredicted RBP18.4■□□□□ 0.54
USP22-206ENST00000537526 CNGB1Q14028 1251 aaPredicted RBP18.38■□□□□ 0.53
USP22-206ENST00000537526 BCANQ96GW7 911 aa18.34■□□□□ 0.53
USP22-206ENST00000537526 MYO15BQ96JP2 1530 aa18.3■□□□□ 0.52
USP22-206ENST00000537526 EEA1Q15075 1411 aa18.27■□□□□ 0.51
USP22-206ENST00000537526 RSF1Q96T23 1441 aaPredicted RBP18.22■□□□□ 0.51
USP22-206ENST00000537526 TONSLQ96HA7 1378 aa18.16■□□□□ 0.5
USP22-206ENST00000537526 ZNF326Q5BKZ1 582 aaKnown RBP18.15■□□□□ 0.5
USP22-206ENST00000537526 SLC4A1APQ9BWU0 796 aaKnown RBP18.14■□□□□ 0.49
USP22-206ENST00000537526 P3H3Q8IVL6 736 aa18.13■□□□□ 0.49
USP22-206ENST00000537526 CLIP1P30622 1438 aa18.12■□□□□ 0.49
USP22-206ENST00000537526 SCAF1Q9H7N4 1312 aaKnown RBP18.1■□□□□ 0.49
USP22-206ENST00000537526 GOLGA3Q08378 1498 aa18.09■□□□□ 0.49
USP22-206ENST00000537526 ANP32AP39687 249 aaKnown RBP18.07■□□□□ 0.48
USP22-206ENST00000537526 FKBP8Q14318 412 aa18.07■□□□□ 0.48
USP22-206ENST00000537526 CEP162Q5TB80 1403 aa18.07■□□□□ 0.48
USP22-206ENST00000537526 RB1CC1Q8TDY2 1594 aa18.03■□□□□ 0.48
USP22-206ENST00000537526 NACADO15069 1562 aa18.03■□□□□ 0.48
USP22-206ENST00000537526 TNIKQ9UKE5 1360 aa18.03■□□□□ 0.48
USP22-206ENST00000537526 DDX10Q13206 875 aaKnown RBP18.02■□□□□ 0.48
USP22-206ENST00000537526 MIER1Q8N108 512 aa17.99■□□□□ 0.47
USP22-206ENST00000537526 HNRNPUQ00839 825 aaKnown RBP eCLIP17.98■□□□□ 0.47
USP22-206ENST00000537526 WRNQ14191 1432 aaPredicted RBP eCLIP17.93■□□□□ 0.46
USP22-206ENST00000537526 CEP164Q9UPV0 1460 aa17.93■□□□□ 0.46
USP22-206ENST00000537526 FBLN2P98095 1184 aa17.92■□□□□ 0.46
USP22-206ENST00000537526 CANXP27824 592 aaKnown RBP17.91■□□□□ 0.46
USP22-206ENST00000537526 ZBTB47Q9UFB7 747 aaPredicted RBP17.9■□□□□ 0.46
USP22-206ENST00000537526 ZNF777Q9ULD5 760 aaPredicted RBP17.88■□□□□ 0.45
USP22-206ENST00000537526 MTUS2Q5JR59 1369 aa17.87■□□□□ 0.45
USP22-206ENST00000537526 BAZ1AQ9NRL2 1556 aaPredicted RBP17.86■□□□□ 0.45
USP22-206ENST00000537526 ARID3CA6NKF2 412 aa17.84■□□□□ 0.45
USP22-206ENST00000537526 NEFMP07197 916 aa17.83■□□□□ 0.44
USP22-206ENST00000537526 FAM9BQ8IZU0 186 aa17.82■□□□□ 0.44
USP22-206ENST00000537526 KIF27Q86VH2 1401 aa17.77■□□□□ 0.44
USP22-206ENST00000537526 EIF4G2P78344 907 aaKnown RBP eCLIP17.77■□□□□ 0.44
USP22-206ENST00000537526 MRS2Q9HD23 443 aa17.77■□□□□ 0.44
USP22-206ENST00000537526 TMC1Q8TDI8 760 aa17.77■□□□□ 0.43
USP22-206ENST00000537526 CCDC136Q96JN2 1154 aa17.76■□□□□ 0.43
USP22-206ENST00000537526 BAZ1BQ9UIG0 1483 aaKnown RBP17.74■□□□□ 0.43
USP22-206ENST00000537526 NPM2Q86SE8 214 aaKnown RBP17.74■□□□□ 0.43
USP22-206ENST00000537526 CHIC2Q9UKJ5 165 aa17.73■□□□□ 0.43
USP22-206ENST00000537526 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.71■□□□□ 0.43
USP22-206ENST00000537526 UPF2Q9HAU5 1272 aaKnown RBP17.68■□□□□ 0.42
USP22-206ENST00000537526 TSPY4P0CV99 314 aa17.68■□□□□ 0.42
USP22-206ENST00000537526 TSPY10P0CW01 314 aa17.68■□□□□ 0.42
USP22-206ENST00000537526 TIMELESSQ9UNS1 1208 aa17.66■□□□□ 0.42
USP22-206ENST00000537526 CECR2Q9BXF3 1484 aa17.66■□□□□ 0.42
USP22-206ENST00000537526 CCNB3Q8WWL7 1395 aa17.6■□□□□ 0.41
USP22-206ENST00000537526 VPS8Q8N3P4 1428 aa17.59■□□□□ 0.41
USP22-206ENST00000537526 WDR43Q15061 677 aaKnown RBP eCLIP17.59■□□□□ 0.41
USP22-206ENST00000537526 FHAD1B1AJZ9 1412 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms