RNA–Protein interactions for RNA: ENST00000541030.5

STRC-213, Transcript of stereocilin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene STRC, Length 5,305 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRC-213ENST00000541030 DCAF8L2P0C7V8 631 aa20.94■□□□□ 0.94
STRC-213ENST00000541030 PELP1Q8IZL8 1130 aaKnown RBP20.23■□□□□ 0.83
STRC-213ENST00000541030 SUPT5HO00267 1087 aaKnown RBP20.1■□□□□ 0.81
STRC-213ENST00000541030 NISCHQ9Y2I1 1504 aa19.86■□□□□ 0.77
STRC-213ENST00000541030 SHROOM4Q9ULL8 1493 aa19.53■□□□□ 0.72
STRC-213ENST00000541030 APLP2Q06481 763 aa19.45■□□□□ 0.7
STRC-213ENST00000541030 EHMT2Q96KQ7 1210 aa19.35■□□□□ 0.69
STRC-213ENST00000541030 MYT1Q01538 1121 aa19.26■□□□□ 0.67
STRC-213ENST00000541030 CCER1Q8TC90 406 aaPredicted RBP19.26■□□□□ 0.67
STRC-213ENST00000541030 ERICH6Q7L0X2 663 aa19.19■□□□□ 0.66
STRC-213ENST00000541030 CENPBP07199 599 aaPredicted RBP19.13■□□□□ 0.65
STRC-213ENST00000541030 ZEB1P37275 1124 aaPredicted RBP19.11■□□□□ 0.65
STRC-213ENST00000541030 FAM9AQ8IZU1 332 aaPredicted RBP19.1■□□□□ 0.65
STRC-213ENST00000541030 PCGF6Q9BYE7 350 aa19.04■□□□□ 0.64
STRC-213ENST00000541030 TTBK1Q5TCY1 1321 aaPredicted RBP18.79■□□□□ 0.6
STRC-213ENST00000541030 TRIM41Q8WV44 630 aa18.71■□□□□ 0.59
STRC-213ENST00000541030 NEFLP07196 543 aa18.69■□□□□ 0.58
STRC-213ENST00000541030 RANGAP1P46060 587 aaPredicted RBP18.53■□□□□ 0.56
STRC-213ENST00000541030 UBTFP17480 764 aaKnown RBP18.5■□□□□ 0.55
STRC-213ENST00000541030 ATP1B4Q9UN42 357 aaPredicted RBP18.48■□□□□ 0.55
STRC-213ENST00000541030 YTHDC1Q96MU7 727 aaKnown RBP18.44■□□□□ 0.54
STRC-213ENST00000541030 TRIM26Q12899 539 aaPredicted RBP18.32■□□□□ 0.52
STRC-213ENST00000541030 DAXXQ9UER7 740 aaPredicted RBP18.25■□□□□ 0.51
STRC-213ENST00000541030 HRCP23327 699 aa18.17■□□□□ 0.5
STRC-213ENST00000541030 PPARGC1BQ86YN6 1023 aaKnown RBP18.03■□□□□ 0.48
STRC-213ENST00000541030 ITGAEP38570 1179 aa17.87■□□□□ 0.45
STRC-213ENST00000541030 RTL5Q5HYW3 569 aaPredicted RBP17.87■□□□□ 0.45
STRC-213ENST00000541030 POLR3GLQ9BT43 218 aa17.87■□□□□ 0.45
STRC-213ENST00000541030 HNRNPUL2Q1KMD3 747 aaKnown RBP17.81■□□□□ 0.44
STRC-213ENST00000541030 CHIC1Q5VXU3 224 aa17.81■□□□□ 0.44
STRC-213ENST00000541030 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.8■□□□□ 0.44
STRC-213ENST00000541030 MYT1LQ9UL68 1186 aa17.78■□□□□ 0.44
STRC-213ENST00000541030 LOC105371045A0A1W2PR82 267 aa17.75■□□□□ 0.43
STRC-213ENST00000541030 ZNF316A6NFI3 1004 aaPredicted RBP17.75■□□□□ 0.43
STRC-213ENST00000541030 DIEXFQ68CQ4 756 aaKnown RBP17.74■□□□□ 0.43
STRC-213ENST00000541030 CLSPNQ9HAW4 1339 aa17.65■□□□□ 0.42
STRC-213ENST00000541030 CNGB1Q14028 1251 aaPredicted RBP17.58■□□□□ 0.4
STRC-213ENST00000541030 SLC4A1APQ9BWU0 796 aaKnown RBP17.52■□□□□ 0.4
STRC-213ENST00000541030 FAM50AQ14320 339 aaKnown RBP17.47■□□□□ 0.39
STRC-213ENST00000541030 CDK11AQ9UQ88 783 aaPredicted RBP17.45■□□□□ 0.38
STRC-213ENST00000541030 ANP32CO43423 234 aa17.44■□□□□ 0.38
STRC-213ENST00000541030 TRIM52Q96A61 297 aa17.42■□□□□ 0.38
STRC-213ENST00000541030 GTF3C3Q9Y5Q9 886 aa17.41■□□□□ 0.38
STRC-213ENST00000541030 NEUROD1Q13562 356 aa17.35■□□□□ 0.37
STRC-213ENST00000541030 ZBTB47Q9UFB7 747 aaPredicted RBP17.34■□□□□ 0.37
STRC-213ENST00000541030 BCANQ96GW7 911 aa17.32■□□□□ 0.36
STRC-213ENST00000541030 ACIN1Q9UKV3 1341 aaKnown RBP17.2■□□□□ 0.34
STRC-213ENST00000541030 ANP32AP39687 249 aaKnown RBP17.19■□□□□ 0.34
STRC-213ENST00000541030 CANXP27824 592 aaKnown RBP17.18■□□□□ 0.34
STRC-213ENST00000541030 ZNF326Q5BKZ1 582 aaKnown RBP17.17■□□□□ 0.34
STRC-213ENST00000541030 GLIPR1L2Q4G1C9 344 aa17.17■□□□□ 0.34
STRC-213ENST00000541030 NEFMP07197 916 aa17.14■□□□□ 0.33
STRC-213ENST00000541030 ABCC9O60706 1549 aa17.11■□□□□ 0.33
STRC-213ENST00000541030 ANP32BQ92688 251 aaKnown RBP17.09■□□□□ 0.33
STRC-213ENST00000541030 PABPN1Q86U42 306 aaKnown RBP eCLIP17.02■□□□□ 0.32
STRC-213ENST00000541030 CSRNP3Q8WYN3 585 aa16.99■□□□□ 0.31
STRC-213ENST00000541030 SLC24A1O60721 1099 aa16.91■□□□□ 0.3
STRC-213ENST00000541030 NPM2Q86SE8 214 aaKnown RBP16.91■□□□□ 0.3
STRC-213ENST00000541030 UPF2Q9HAU5 1272 aaKnown RBP16.91■□□□□ 0.3
STRC-213ENST00000541030 FKBP8Q14318 412 aa16.9■□□□□ 0.3
STRC-213ENST00000541030 TONSLQ96HA7 1378 aa16.88■□□□□ 0.29
STRC-213ENST00000541030 BCL11AQ9H165 835 aa16.86■□□□□ 0.29
STRC-213ENST00000541030 FBLN2P98095 1184 aa16.86■□□□□ 0.29
STRC-213ENST00000541030 HSP90AA1P07900 732 aaKnown RBP16.85■□□□□ 0.29
STRC-213ENST00000541030 EIF5BO60841 1220 aaKnown RBP16.84■□□□□ 0.29
STRC-213ENST00000541030 DCAF1Q9Y4B6 1507 aa16.82■□□□□ 0.28
STRC-213ENST00000541030 HNRNPUQ00839 825 aaKnown RBP eCLIP16.82■□□□□ 0.28
STRC-213ENST00000541030 P3H3Q8IVL6 736 aa16.81■□□□□ 0.28
STRC-213ENST00000541030 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.78■□□□□ 0.28
STRC-213ENST00000541030 ZNF777Q9ULD5 760 aaPredicted RBP16.77■□□□□ 0.28
STRC-213ENST00000541030 CCDC136Q96JN2 1154 aa16.73■□□□□ 0.27
STRC-213ENST00000541030 DDX10Q13206 875 aaKnown RBP16.72■□□□□ 0.27
STRC-213ENST00000541030 FAM9BQ8IZU0 186 aa16.72■□□□□ 0.27
STRC-213ENST00000541030 ARID3CA6NKF2 412 aa16.69■□□□□ 0.26
STRC-213ENST00000541030 TMC1Q8TDI8 760 aa16.68■□□□□ 0.26
STRC-213ENST00000541030 ESF1Q9H501 851 aaKnown RBP16.64■□□□□ 0.25
STRC-213ENST00000541030 WDR43Q15061 677 aaKnown RBP eCLIP16.62■□□□□ 0.25
STRC-213ENST00000541030 MRS2Q9HD23 443 aa16.6■□□□□ 0.25
STRC-213ENST00000541030 STAG3Q9UJ98 1225 aa16.59■□□□□ 0.25
STRC-213ENST00000541030 ANP32EQ9BTT0 268 aa16.59■□□□□ 0.25
STRC-213ENST00000541030 CHGAP10645 457 aaKnown RBP16.58■□□□□ 0.24
STRC-213ENST00000541030 NBR1Q14596 966 aa16.58■□□□□ 0.24
STRC-213ENST00000541030 DDRGK1Q96HY6 314 aa16.56■□□□□ 0.24
STRC-213ENST00000541030 CDK11BP21127 795 aaKnown RBP16.55■□□□□ 0.24
STRC-213ENST00000541030 TNNT2P45379 298 aaPredicted RBP16.55■□□□□ 0.24
STRC-213ENST00000541030 SALL2Q9Y467 1007 aaPredicted RBP16.54■□□□□ 0.24
STRC-213ENST00000541030 MYH16Q9H6N6 1097 aa16.52■□□□□ 0.23
STRC-213ENST00000541030 BECN1Q14457 450 aa16.51■□□□□ 0.23
STRC-213ENST00000541030 TSPY4P0CV99 314 aa16.49■□□□□ 0.23
STRC-213ENST00000541030 TSPY10P0CW01 314 aa16.49■□□□□ 0.23
STRC-213ENST00000541030 EIF4G2P78344 907 aaKnown RBP eCLIP16.48■□□□□ 0.23
STRC-213ENST00000541030 MIER1Q8N108 512 aa16.48■□□□□ 0.23
STRC-213ENST00000541030 SCAF1Q9H7N4 1312 aaKnown RBP16.47■□□□□ 0.23
STRC-213ENST00000541030 NPM1P06748 294 aaKnown RBP eCLIP16.46■□□□□ 0.23
STRC-213ENST00000541030 CHIC2Q9UKJ5 165 aa16.46■□□□□ 0.23
STRC-213ENST00000541030 MTUS2Q5JR59 1369 aa16.45■□□□□ 0.22
STRC-213ENST00000541030 SCRIBQ14160 1630 aa16.44■□□□□ 0.22
STRC-213ENST00000541030 GOLGA6L22H0YM25 854 aa16.43■□□□□ 0.22
STRC-213ENST00000541030 NCLP19338 710 aaKnown RBP16.42■□□□□ 0.22
STRC-213ENST00000541030 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms