Protein–RNA interactions for Protein: Q8WXD2

SCG3, Secretogranin-3, humanhuman

Known RBP Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3Q8WXD2 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
SCG3Q8WXD2 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.92■□□□□ 0.3
SCG3Q8WXD2 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SCG3Q8WXD2 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SCG3Q8WXD2 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SCG3Q8WXD2 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC16.92■□□□□ 0.3
SCG3Q8WXD2 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SCG3Q8WXD2 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SCG3Q8WXD2 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
SCG3Q8WXD2 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SCG3Q8WXD2 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SCG3Q8WXD2 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SCG3Q8WXD2 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SCG3Q8WXD2 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SCG3Q8WXD2 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SCG3Q8WXD2 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SCG3Q8WXD2 AC211486.1-202ENST00000416371 468 ntBASIC16.92■□□□□ 0.3
SCG3Q8WXD2 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC16.92■□□□□ 0.3
SCG3Q8WXD2 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC16.92■□□□□ 0.3
SCG3Q8WXD2 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC16.92■□□□□ 0.3
SCG3Q8WXD2 AC211476.1-201ENST00000503899 468 ntBASIC16.92■□□□□ 0.3
SCG3Q8WXD2 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
SCG3Q8WXD2 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.92■□□□□ 0.3
SCG3Q8WXD2 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
SCG3Q8WXD2 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC16.92■□□□□ 0.3
SCG3Q8WXD2 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC16.92■□□□□ 0.3
SCG3Q8WXD2 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
SCG3Q8WXD2 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SCG3Q8WXD2 PI4KAP1-204ENST00000612579 1703 ntBASIC16.92■□□□□ 0.3
SCG3Q8WXD2 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
SCG3Q8WXD2 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.92■□□□□ 0.3
SCG3Q8WXD2 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SCG3Q8WXD2 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SCG3Q8WXD2 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SCG3Q8WXD2 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
SCG3Q8WXD2 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SCG3Q8WXD2 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.91■□□□□ 0.3
SCG3Q8WXD2 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SCG3Q8WXD2 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
SCG3Q8WXD2 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SCG3Q8WXD2 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.91■□□□□ 0.3
SCG3Q8WXD2 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
SCG3Q8WXD2 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
SCG3Q8WXD2 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SCG3Q8WXD2 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.91■□□□□ 0.3
SCG3Q8WXD2 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
SCG3Q8WXD2 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SCG3Q8WXD2 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SCG3Q8WXD2 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
SCG3Q8WXD2 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.91■□□□□ 0.3
SCG3Q8WXD2 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
SCG3Q8WXD2 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC16.91■□□□□ 0.3
SCG3Q8WXD2 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SCG3Q8WXD2 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.91■□□□□ 0.3
SCG3Q8WXD2 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SCG3Q8WXD2 AC134684.3-201ENST00000641758 218 ntBASIC16.91■□□□□ 0.3
SCG3Q8WXD2 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SCG3Q8WXD2 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
SCG3Q8WXD2 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SCG3Q8WXD2 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
SCG3Q8WXD2 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
SCG3Q8WXD2 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SCG3Q8WXD2 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
SCG3Q8WXD2 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SCG3Q8WXD2 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.91■□□□□ 0.3
SCG3Q8WXD2 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SCG3Q8WXD2 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SCG3Q8WXD2 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SCG3Q8WXD2 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SCG3Q8WXD2 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SCG3Q8WXD2 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SCG3Q8WXD2 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SCG3Q8WXD2 TOP3BP1-201ENST00000420768 1380 ntBASIC16.9■□□□□ 0.3
SCG3Q8WXD2 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SCG3Q8WXD2 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
SCG3Q8WXD2 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SCG3Q8WXD2 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SCG3Q8WXD2 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SCG3Q8WXD2 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SCG3Q8WXD2 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
SCG3Q8WXD2 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SCG3Q8WXD2 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC16.9■□□□□ 0.3
SCG3Q8WXD2 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SCG3Q8WXD2 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SCG3Q8WXD2 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SCG3Q8WXD2 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC16.9■□□□□ 0.3
SCG3Q8WXD2 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC16.9■□□□□ 0.3
SCG3Q8WXD2 AP001160.2-201ENST00000596071 487 ntBASIC16.9■□□□□ 0.3
SCG3Q8WXD2 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SCG3Q8WXD2 AC007064.4-201ENST00000637740 555 ntBASIC16.9■□□□□ 0.3
SCG3Q8WXD2 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SCG3Q8WXD2 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SCG3Q8WXD2 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.9■□□□□ 0.3
SCG3Q8WXD2 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SCG3Q8WXD2 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
SCG3Q8WXD2 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.9■□□□□ 0.3
SCG3Q8WXD2 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SCG3Q8WXD2 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
SCG3Q8WXD2 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SCG3Q8WXD2 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms