Protein–RNA interactions for Protein: Q8N813

C3orf56, Putative uncharacterized protein C3orf56, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56Q8N813 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
C3orf56Q8N813 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC12.86□□□□□ -0.35
C3orf56Q8N813 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
C3orf56Q8N813 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
C3orf56Q8N813 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
C3orf56Q8N813 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
C3orf56Q8N813 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
C3orf56Q8N813 LINC00896-202ENST00000609602 2128 ntBASIC12.86□□□□□ -0.35
C3orf56Q8N813 PKD1P5-201ENST00000532415 10291 ntBASIC12.86□□□□□ -0.35
C3orf56Q8N813 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC12.86□□□□□ -0.35
C3orf56Q8N813 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC12.86□□□□□ -0.35
C3orf56Q8N813 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC12.86□□□□□ -0.35
C3orf56Q8N813 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC12.86□□□□□ -0.35
C3orf56Q8N813 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
C3orf56Q8N813 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
C3orf56Q8N813 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
C3orf56Q8N813 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
C3orf56Q8N813 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
C3orf56Q8N813 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
C3orf56Q8N813 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC12.86□□□□□ -0.35
C3orf56Q8N813 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
C3orf56Q8N813 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC12.85□□□□□ -0.35
C3orf56Q8N813 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
C3orf56Q8N813 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
C3orf56Q8N813 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC12.85□□□□□ -0.35
C3orf56Q8N813 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
C3orf56Q8N813 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
C3orf56Q8N813 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC12.85□□□□□ -0.35
C3orf56Q8N813 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
C3orf56Q8N813 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
C3orf56Q8N813 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
C3orf56Q8N813 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC12.85□□□□□ -0.35
C3orf56Q8N813 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
C3orf56Q8N813 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
C3orf56Q8N813 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC12.85□□□□□ -0.35
C3orf56Q8N813 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
C3orf56Q8N813 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC12.85□□□□□ -0.35
C3orf56Q8N813 BNIP3P42-201ENST00000454982 569 ntBASIC12.85□□□□□ -0.35
C3orf56Q8N813 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC12.85□□□□□ -0.35
C3orf56Q8N813 RAB35-202ENST00000534951 939 ntTSL 2 BASIC12.85□□□□□ -0.35
C3orf56Q8N813 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC12.85□□□□□ -0.35
C3orf56Q8N813 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
C3orf56Q8N813 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC12.85□□□□□ -0.35
C3orf56Q8N813 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC12.85□□□□□ -0.35
C3orf56Q8N813 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC12.85□□□□□ -0.35
C3orf56Q8N813 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC12.85□□□□□ -0.35
C3orf56Q8N813 AC015936.2-201ENST00000593177 259 ntBASIC12.85□□□□□ -0.35
C3orf56Q8N813 CYP2A7P1-201ENST00000595391 815 ntBASIC12.85□□□□□ -0.35
C3orf56Q8N813 BNIP3P29-201ENST00000598302 571 ntBASIC12.85□□□□□ -0.35
C3orf56Q8N813 AC011447.5-201ENST00000616168 564 ntBASIC12.85□□□□□ -0.35
C3orf56Q8N813 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC12.85□□□□□ -0.35
C3orf56Q8N813 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC12.85□□□□□ -0.35
C3orf56Q8N813 AL109936.8-201ENST00000641772 604 ntBASIC12.85□□□□□ -0.35
C3orf56Q8N813 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC12.85□□□□□ -0.35
C3orf56Q8N813 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC12.85□□□□□ -0.35
C3orf56Q8N813 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
C3orf56Q8N813 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
C3orf56Q8N813 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
C3orf56Q8N813 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
C3orf56Q8N813 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
C3orf56Q8N813 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
C3orf56Q8N813 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
C3orf56Q8N813 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC12.85□□□□□ -0.35
C3orf56Q8N813 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
C3orf56Q8N813 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
C3orf56Q8N813 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
C3orf56Q8N813 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC12.85□□□□□ -0.35
C3orf56Q8N813 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC12.85□□□□□ -0.35
C3orf56Q8N813 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
C3orf56Q8N813 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
C3orf56Q8N813 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
C3orf56Q8N813 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC12.84□□□□□ -0.35
C3orf56Q8N813 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC12.84□□□□□ -0.35
C3orf56Q8N813 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
C3orf56Q8N813 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
C3orf56Q8N813 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC12.84□□□□□ -0.35
C3orf56Q8N813 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
C3orf56Q8N813 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
C3orf56Q8N813 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
C3orf56Q8N813 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
C3orf56Q8N813 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC12.84□□□□□ -0.35
C3orf56Q8N813 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC12.84□□□□□ -0.35
C3orf56Q8N813 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC12.84□□□□□ -0.35
C3orf56Q8N813 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC12.84□□□□□ -0.35
C3orf56Q8N813 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
C3orf56Q8N813 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC12.84□□□□□ -0.35
C3orf56Q8N813 SRD5A3P1-201ENST00000603021 949 ntBASIC12.84□□□□□ -0.35
C3orf56Q8N813 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
C3orf56Q8N813 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
C3orf56Q8N813 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC12.84□□□□□ -0.35
C3orf56Q8N813 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
C3orf56Q8N813 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
C3orf56Q8N813 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC12.84□□□□□ -0.35
C3orf56Q8N813 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
C3orf56Q8N813 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
C3orf56Q8N813 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC12.84□□□□□ -0.35
C3orf56Q8N813 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
C3orf56Q8N813 FOS-208ENST00000555686 1496 ntTSL 2 BASIC12.84□□□□□ -0.35
C3orf56Q8N813 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
C3orf56Q8N813 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms