Protein–RNA interactions for Protein: O00421

CCRL2, C-C chemokine receptor-like 2, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCRL2O00421 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCRL2O00421 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC14.87□□□□□ -0.03
CCRL2O00421 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.87□□□□□ -0.03
CCRL2O00421 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCRL2O00421 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCRL2O00421 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
CCRL2O00421 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CCRL2O00421 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCRL2O00421 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCRL2O00421 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCRL2O00421 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CCRL2O00421 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC14.87□□□□□ -0.03
CCRL2O00421 POU5F1P6-201ENST00000466990 990 ntBASIC14.87□□□□□ -0.03
CCRL2O00421 PPOX-219ENST00000544598 813 ntTSL 2 BASIC14.87□□□□□ -0.03
CCRL2O00421 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC14.87□□□□□ -0.03
CCRL2O00421 AL138831.2-201ENST00000606564 490 ntBASIC14.87□□□□□ -0.03
CCRL2O00421 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC14.87□□□□□ -0.03
CCRL2O00421 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CCRL2O00421 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCRL2O00421 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CCRL2O00421 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC14.87□□□□□ -0.03
CCRL2O00421 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CCRL2O00421 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC14.87□□□□□ -0.03
CCRL2O00421 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCRL2O00421 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC14.87□□□□□ -0.03
CCRL2O00421 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC14.87□□□□□ -0.03
CCRL2O00421 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC14.87□□□□□ -0.03
CCRL2O00421 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
CCRL2O00421 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCRL2O00421 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
CCRL2O00421 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.87□□□□□ -0.03
CCRL2O00421 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC14.87□□□□□ -0.03
CCRL2O00421 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC14.87□□□□□ -0.03
CCRL2O00421 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
CCRL2O00421 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
CCRL2O00421 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC14.87□□□□□ -0.03
CCRL2O00421 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CCRL2O00421 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCRL2O00421 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CCRL2O00421 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC14.87□□□□□ -0.03
CCRL2O00421 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC14.87□□□□□ -0.03
CCRL2O00421 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCRL2O00421 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
CCRL2O00421 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
CCRL2O00421 AC069224.1-201ENST00000566372 1715 ntBASIC14.86□□□□□ -0.03
CCRL2O00421 AC139749.1-202ENST00000617529 3139 ntBASIC14.86□□□□□ -0.03
CCRL2O00421 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCRL2O00421 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCRL2O00421 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CCRL2O00421 SSR4P1-203ENST00000599569 2260 ntBASIC14.86□□□□□ -0.03
CCRL2O00421 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CCRL2O00421 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCRL2O00421 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCRL2O00421 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCRL2O00421 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
CCRL2O00421 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC14.86□□□□□ -0.03
CCRL2O00421 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCRL2O00421 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC14.86□□□□□ -0.03
CCRL2O00421 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCRL2O00421 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
CCRL2O00421 SPDYE15P-201ENST00000424157 909 ntBASIC14.86□□□□□ -0.03
CCRL2O00421 ACTG1P4-201ENST00000425123 1122 ntBASIC14.86□□□□□ -0.03
CCRL2O00421 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC14.86□□□□□ -0.03
CCRL2O00421 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CCRL2O00421 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC14.86□□□□□ -0.03
CCRL2O00421 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC14.86□□□□□ -0.03
CCRL2O00421 AC139887.4-201ENST00000607877 719 ntBASIC14.86□□□□□ -0.03
CCRL2O00421 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCRL2O00421 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCRL2O00421 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCRL2O00421 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC14.86□□□□□ -0.03
CCRL2O00421 HNRNPRP1-201ENST00000453465 1695 ntBASIC14.86□□□□□ -0.03
CCRL2O00421 AC016027.1-202ENST00000607927 1699 ntBASIC14.86□□□□□ -0.03
CCRL2O00421 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCRL2O00421 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCRL2O00421 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCRL2O00421 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
CCRL2O00421 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCRL2O00421 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCRL2O00421 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC14.86□□□□□ -0.03
CCRL2O00421 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC14.86□□□□□ -0.03
CCRL2O00421 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCRL2O00421 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
CCRL2O00421 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCRL2O00421 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCRL2O00421 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC14.86□□□□□ -0.03
CCRL2O00421 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC14.86□□□□□ -0.03
CCRL2O00421 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCRL2O00421 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCRL2O00421 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CCRL2O00421 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC14.85□□□□□ -0.03
CCRL2O00421 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC14.85□□□□□ -0.03
CCRL2O00421 AC006486.2-201ENST00000624246 2199 ntBASIC14.85□□□□□ -0.03
CCRL2O00421 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCRL2O00421 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CCRL2O00421 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCRL2O00421 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCRL2O00421 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CCRL2O00421 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.85□□□□□ -0.03
CCRL2O00421 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms