Protein–RNA interactions for Protein: Q9Y5E2

PCDHB7, Protocadherin beta-7, humanhuman

Predictions only

Length 793 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB7Q9Y5E2 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC25.84■■□□□ 1.73
PCDHB7Q9Y5E2 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC25.84■■□□□ 1.73
PCDHB7Q9Y5E2 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC25.83■■□□□ 1.73
PCDHB7Q9Y5E2 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC25.83■■□□□ 1.73
PCDHB7Q9Y5E2 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC25.83■■□□□ 1.73
PCDHB7Q9Y5E2 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC25.83■■□□□ 1.73
PCDHB7Q9Y5E2 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC25.83■■□□□ 1.73
PCDHB7Q9Y5E2 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
PCDHB7Q9Y5E2 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC25.83■■□□□ 1.73
PCDHB7Q9Y5E2 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.72
PCDHB7Q9Y5E2 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC25.82■■□□□ 1.72
PCDHB7Q9Y5E2 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC25.82■■□□□ 1.72
PCDHB7Q9Y5E2 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC25.81■■□□□ 1.72
PCDHB7Q9Y5E2 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
PCDHB7Q9Y5E2 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC25.81■■□□□ 1.72
PCDHB7Q9Y5E2 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC25.81■■□□□ 1.72
PCDHB7Q9Y5E2 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
PCDHB7Q9Y5E2 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC25.8■■□□□ 1.72
PCDHB7Q9Y5E2 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
PCDHB7Q9Y5E2 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC25.79■■□□□ 1.72
PCDHB7Q9Y5E2 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
PCDHB7Q9Y5E2 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC25.79■■□□□ 1.72
PCDHB7Q9Y5E2 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC25.79■■□□□ 1.72
PCDHB7Q9Y5E2 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
PCDHB7Q9Y5E2 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC25.78■■□□□ 1.72
PCDHB7Q9Y5E2 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC25.78■■□□□ 1.72
PCDHB7Q9Y5E2 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC25.78■■□□□ 1.72
PCDHB7Q9Y5E2 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC25.78■■□□□ 1.72
PCDHB7Q9Y5E2 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
PCDHB7Q9Y5E2 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
PCDHB7Q9Y5E2 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC25.77■■□□□ 1.72
PCDHB7Q9Y5E2 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC25.77■■□□□ 1.72
PCDHB7Q9Y5E2 AC011551.1-201ENST00000614101 683 ntBASIC25.77■■□□□ 1.72
PCDHB7Q9Y5E2 GAK-223ENST00000628912 497 ntTSL 5 BASIC25.77■■□□□ 1.72
PCDHB7Q9Y5E2 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
PCDHB7Q9Y5E2 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC25.77■■□□□ 1.72
PCDHB7Q9Y5E2 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC25.76■■□□□ 1.71
PCDHB7Q9Y5E2 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC25.76■■□□□ 1.71
PCDHB7Q9Y5E2 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
PCDHB7Q9Y5E2 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
PCDHB7Q9Y5E2 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC25.75■■□□□ 1.71
PCDHB7Q9Y5E2 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
PCDHB7Q9Y5E2 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
PCDHB7Q9Y5E2 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC25.74■■□□□ 1.71
PCDHB7Q9Y5E2 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
PCDHB7Q9Y5E2 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
PCDHB7Q9Y5E2 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC25.73■■□□□ 1.71
PCDHB7Q9Y5E2 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC25.73■■□□□ 1.71
PCDHB7Q9Y5E2 TRIR-202ENST00000588213 841 ntTSL 3 BASIC25.73■■□□□ 1.71
PCDHB7Q9Y5E2 AC010997.5-201ENST00000609182 354 ntBASIC25.73■■□□□ 1.71
PCDHB7Q9Y5E2 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC25.73■■□□□ 1.71
PCDHB7Q9Y5E2 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC25.72■■□□□ 1.71
PCDHB7Q9Y5E2 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
PCDHB7Q9Y5E2 SRR-208ENST00000576848 588 ntTSL 4 BASIC25.72■■□□□ 1.71
PCDHB7Q9Y5E2 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
PCDHB7Q9Y5E2 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
PCDHB7Q9Y5E2 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC25.71■■□□□ 1.71
PCDHB7Q9Y5E2 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC25.71■■□□□ 1.71
PCDHB7Q9Y5E2 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC25.71■■□□□ 1.71
PCDHB7Q9Y5E2 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC25.7■■□□□ 1.7
PCDHB7Q9Y5E2 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC25.7■■□□□ 1.7
PCDHB7Q9Y5E2 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC25.7■■□□□ 1.7
PCDHB7Q9Y5E2 MTDHP2-201ENST00000601468 714 ntBASIC25.7■■□□□ 1.7
PCDHB7Q9Y5E2 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
PCDHB7Q9Y5E2 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC25.7■■□□□ 1.7
PCDHB7Q9Y5E2 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
PCDHB7Q9Y5E2 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC25.69■■□□□ 1.7
PCDHB7Q9Y5E2 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
PCDHB7Q9Y5E2 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC25.69■■□□□ 1.7
PCDHB7Q9Y5E2 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC25.69■■□□□ 1.7
PCDHB7Q9Y5E2 RPP21-222ENST00000433076 577 ntTSL 2 BASIC25.69■■□□□ 1.7
PCDHB7Q9Y5E2 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC25.69■■□□□ 1.7
PCDHB7Q9Y5E2 SSSCA1-AS1-201ENST00000567594 614 ntBASIC25.69■■□□□ 1.7
PCDHB7Q9Y5E2 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC25.69■■□□□ 1.7
PCDHB7Q9Y5E2 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
PCDHB7Q9Y5E2 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
PCDHB7Q9Y5E2 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
PCDHB7Q9Y5E2 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC25.69■■□□□ 1.7
PCDHB7Q9Y5E2 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC25.68■■□□□ 1.7
PCDHB7Q9Y5E2 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC25.68■■□□□ 1.7
PCDHB7Q9Y5E2 TK2-202ENST00000417693 1046 ntTSL 2 BASIC25.68■■□□□ 1.7
PCDHB7Q9Y5E2 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
PCDHB7Q9Y5E2 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC25.67■■□□□ 1.7
PCDHB7Q9Y5E2 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC25.67■■□□□ 1.7
PCDHB7Q9Y5E2 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC25.67■■□□□ 1.7
PCDHB7Q9Y5E2 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
PCDHB7Q9Y5E2 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC25.67■■□□□ 1.7
PCDHB7Q9Y5E2 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC25.67■■□□□ 1.7
PCDHB7Q9Y5E2 MIR6724-1-201ENST00000616420 92 ntBASIC25.67■■□□□ 1.7
PCDHB7Q9Y5E2 MIR6724-2-201ENST00000616483 92 ntBASIC25.67■■□□□ 1.7
PCDHB7Q9Y5E2 MIR6724-4-201ENST00000617390 92 ntBASIC25.67■■□□□ 1.7
PCDHB7Q9Y5E2 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC25.67■■□□□ 1.7
PCDHB7Q9Y5E2 MIR6724-3-201ENST00000622482 92 ntBASIC25.67■■□□□ 1.7
PCDHB7Q9Y5E2 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
PCDHB7Q9Y5E2 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
PCDHB7Q9Y5E2 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC25.66■■□□□ 1.7
PCDHB7Q9Y5E2 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC25.66■■□□□ 1.7
PCDHB7Q9Y5E2 SENP5-202ENST00000419026 973 ntTSL 3 BASIC25.66■■□□□ 1.7
PCDHB7Q9Y5E2 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
PCDHB7Q9Y5E2 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC25.66■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms