Protein–RNA interactions for Protein: Q9NS62

THSD1, Thrombospondin type-1 domain-containing protein 1, humanhuman

Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THSD1Q9NS62 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC23.13■■□□□ 1.29
THSD1Q9NS62 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
THSD1Q9NS62 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
THSD1Q9NS62 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
THSD1Q9NS62 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
THSD1Q9NS62 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
THSD1Q9NS62 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
THSD1Q9NS62 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
THSD1Q9NS62 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
THSD1Q9NS62 AC022616.5-201ENST00000518796 181 ntBASIC23.1■■□□□ 1.29
THSD1Q9NS62 MIR4787-201ENST00000607364 84 ntBASIC23.1■■□□□ 1.29
THSD1Q9NS62 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
THSD1Q9NS62 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
THSD1Q9NS62 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC23.1■■□□□ 1.29
THSD1Q9NS62 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
THSD1Q9NS62 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC23.09■■□□□ 1.29
THSD1Q9NS62 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
THSD1Q9NS62 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC23.09■■□□□ 1.29
THSD1Q9NS62 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
THSD1Q9NS62 PEMT-206ENST00000435340 960 ntTSL 5 BASIC23.09■■□□□ 1.29
THSD1Q9NS62 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC23.09■■□□□ 1.29
THSD1Q9NS62 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC23.09■■□□□ 1.29
THSD1Q9NS62 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
THSD1Q9NS62 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
THSD1Q9NS62 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC23.09■■□□□ 1.29
THSD1Q9NS62 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
THSD1Q9NS62 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC23.08■■□□□ 1.29
THSD1Q9NS62 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
THSD1Q9NS62 KRT18P10-201ENST00000388836 1287 ntBASIC23.08■■□□□ 1.29
THSD1Q9NS62 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC23.08■■□□□ 1.29
THSD1Q9NS62 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC23.08■■□□□ 1.29
THSD1Q9NS62 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC23.08■■□□□ 1.29
THSD1Q9NS62 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
THSD1Q9NS62 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
THSD1Q9NS62 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
THSD1Q9NS62 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
THSD1Q9NS62 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC23.07■■□□□ 1.28
THSD1Q9NS62 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
THSD1Q9NS62 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC23.07■■□□□ 1.28
THSD1Q9NS62 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
THSD1Q9NS62 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC23.07■■□□□ 1.28
THSD1Q9NS62 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
THSD1Q9NS62 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC23.06■■□□□ 1.28
THSD1Q9NS62 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
THSD1Q9NS62 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC23.06■■□□□ 1.28
THSD1Q9NS62 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
THSD1Q9NS62 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
THSD1Q9NS62 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC23.05■■□□□ 1.28
THSD1Q9NS62 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
THSD1Q9NS62 KRT16P3-201ENST00000439127 1283 ntBASIC23.05■■□□□ 1.28
THSD1Q9NS62 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC23.05■■□□□ 1.28
THSD1Q9NS62 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
THSD1Q9NS62 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC23.04■■□□□ 1.28
THSD1Q9NS62 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
THSD1Q9NS62 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
THSD1Q9NS62 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC23.03■■□□□ 1.28
THSD1Q9NS62 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC23.03■■□□□ 1.28
THSD1Q9NS62 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC23.03■■□□□ 1.28
THSD1Q9NS62 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
THSD1Q9NS62 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
THSD1Q9NS62 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
THSD1Q9NS62 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC23.03■■□□□ 1.28
THSD1Q9NS62 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC23.03■■□□□ 1.28
THSD1Q9NS62 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
THSD1Q9NS62 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
THSD1Q9NS62 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
THSD1Q9NS62 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC23.02■■□□□ 1.28
THSD1Q9NS62 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC23.02■■□□□ 1.28
THSD1Q9NS62 DUSP8P4-201ENST00000399538 1761 ntBASIC23.02■■□□□ 1.28
THSD1Q9NS62 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
THSD1Q9NS62 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
THSD1Q9NS62 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
THSD1Q9NS62 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC23.02■■□□□ 1.28
THSD1Q9NS62 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
THSD1Q9NS62 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
THSD1Q9NS62 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC23.01■■□□□ 1.27
THSD1Q9NS62 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC23.01■■□□□ 1.27
THSD1Q9NS62 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
THSD1Q9NS62 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC23.01■■□□□ 1.27
THSD1Q9NS62 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
THSD1Q9NS62 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
THSD1Q9NS62 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC23.01■■□□□ 1.27
THSD1Q9NS62 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
THSD1Q9NS62 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
THSD1Q9NS62 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
THSD1Q9NS62 UNC93B8-201ENST00000511903 705 ntBASIC23■■□□□ 1.27
THSD1Q9NS62 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
THSD1Q9NS62 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC23■■□□□ 1.27
THSD1Q9NS62 AC092803.2-201ENST00000564287 1899 ntBASIC23■■□□□ 1.27
THSD1Q9NS62 AP004609.3-201ENST00000610705 1884 ntBASIC23■■□□□ 1.27
THSD1Q9NS62 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
THSD1Q9NS62 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC22.99■■□□□ 1.27
THSD1Q9NS62 AC020928.2-201ENST00000588717 2197 ntBASIC22.99■■□□□ 1.27
THSD1Q9NS62 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC22.98■■□□□ 1.27
THSD1Q9NS62 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC22.98■■□□□ 1.27
THSD1Q9NS62 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
THSD1Q9NS62 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC22.98■■□□□ 1.27
THSD1Q9NS62 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
THSD1Q9NS62 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
THSD1Q9NS62 KRT18P24-201ENST00000344739 1156 ntBASIC22.97■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms