Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC23.79■■□□□ 1.4
VPS11Q9H270 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
VPS11Q9H270 AC133561.1-201ENST00000568600 2415 ntBASIC23.79■■□□□ 1.4
VPS11Q9H270 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC23.79■■□□□ 1.4
VPS11Q9H270 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
VPS11Q9H270 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC23.79■■□□□ 1.4
VPS11Q9H270 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
VPS11Q9H270 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC23.79■■□□□ 1.4
VPS11Q9H270 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
VPS11Q9H270 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
VPS11Q9H270 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
VPS11Q9H270 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
VPS11Q9H270 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
VPS11Q9H270 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
VPS11Q9H270 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC23.78■■□□□ 1.4
VPS11Q9H270 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
VPS11Q9H270 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
VPS11Q9H270 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
VPS11Q9H270 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
VPS11Q9H270 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
VPS11Q9H270 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
VPS11Q9H270 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
VPS11Q9H270 AC016575.1-201ENST00000607026 382 ntBASIC23.77■■□□□ 1.4
VPS11Q9H270 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
VPS11Q9H270 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC23.77■■□□□ 1.4
VPS11Q9H270 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC23.76■■□□□ 1.39
VPS11Q9H270 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
VPS11Q9H270 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
VPS11Q9H270 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
VPS11Q9H270 AC097639.1-201ENST00000565519 1891 ntBASIC23.76■■□□□ 1.39
VPS11Q9H270 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
VPS11Q9H270 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC23.75■■□□□ 1.39
VPS11Q9H270 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC23.75■■□□□ 1.39
VPS11Q9H270 MACF1-219ENST00000484793 834 ntTSL 2 BASIC23.75■■□□□ 1.39
VPS11Q9H270 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
VPS11Q9H270 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
VPS11Q9H270 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
VPS11Q9H270 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
VPS11Q9H270 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
VPS11Q9H270 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
VPS11Q9H270 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
VPS11Q9H270 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
VPS11Q9H270 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
VPS11Q9H270 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
VPS11Q9H270 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
VPS11Q9H270 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
VPS11Q9H270 LINC00543-201ENST00000567234 1845 ntBASIC23.73■■□□□ 1.39
VPS11Q9H270 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC23.72■■□□□ 1.39
VPS11Q9H270 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
VPS11Q9H270 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC23.72■■□□□ 1.39
VPS11Q9H270 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC23.72■■□□□ 1.39
VPS11Q9H270 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
VPS11Q9H270 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
VPS11Q9H270 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC23.72■■□□□ 1.39
VPS11Q9H270 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC23.72■■□□□ 1.39
VPS11Q9H270 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
VPS11Q9H270 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
VPS11Q9H270 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
VPS11Q9H270 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
VPS11Q9H270 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
VPS11Q9H270 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC23.71■■□□□ 1.39
VPS11Q9H270 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
VPS11Q9H270 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
VPS11Q9H270 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
VPS11Q9H270 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
VPS11Q9H270 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
VPS11Q9H270 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
VPS11Q9H270 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
VPS11Q9H270 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
VPS11Q9H270 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
VPS11Q9H270 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC23.7■■□□□ 1.38
VPS11Q9H270 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.38
VPS11Q9H270 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC23.7■■□□□ 1.38
VPS11Q9H270 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
VPS11Q9H270 CASK-201ENST00000378154 2494 ntTSL 5 BASIC23.7■■□□□ 1.38
VPS11Q9H270 SLC6A10P-202ENST00000431994 2058 ntBASIC23.69■■□□□ 1.38
VPS11Q9H270 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC23.69■■□□□ 1.38
VPS11Q9H270 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
VPS11Q9H270 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
VPS11Q9H270 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC23.68■■□□□ 1.38
VPS11Q9H270 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
VPS11Q9H270 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
VPS11Q9H270 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
VPS11Q9H270 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC23.68■■□□□ 1.38
VPS11Q9H270 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC23.68■■□□□ 1.38
VPS11Q9H270 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC23.68■■□□□ 1.38
VPS11Q9H270 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC23.68■■□□□ 1.38
VPS11Q9H270 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC23.68■■□□□ 1.38
VPS11Q9H270 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
VPS11Q9H270 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
VPS11Q9H270 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
VPS11Q9H270 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
VPS11Q9H270 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
VPS11Q9H270 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
VPS11Q9H270 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
VPS11Q9H270 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
VPS11Q9H270 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC23.66■■□□□ 1.38
VPS11Q9H270 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
VPS11Q9H270 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
VPS11Q9H270 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC23.66■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms