Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SPG11Q96JI7 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
SPG11Q96JI7 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SPG11Q96JI7 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
SPG11Q96JI7 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.38■□□□□ 0.85
SPG11Q96JI7 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
SPG11Q96JI7 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SPG11Q96JI7 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.37■□□□□ 0.85
SPG11Q96JI7 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.37■□□□□ 0.85
SPG11Q96JI7 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
SPG11Q96JI7 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
SPG11Q96JI7 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SPG11Q96JI7 AC135279.3-201ENST00000610945 1311 ntBASIC20.36■□□□□ 0.85
SPG11Q96JI7 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC20.36■□□□□ 0.85
SPG11Q96JI7 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.36■□□□□ 0.85
SPG11Q96JI7 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.36■□□□□ 0.85
SPG11Q96JI7 AC087623.3-201ENST00000607047 1098 ntBASIC20.36■□□□□ 0.85
SPG11Q96JI7 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SPG11Q96JI7 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
SPG11Q96JI7 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SPG11Q96JI7 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SPG11Q96JI7 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC20.36■□□□□ 0.85
SPG11Q96JI7 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SPG11Q96JI7 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SPG11Q96JI7 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SPG11Q96JI7 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SPG11Q96JI7 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SPG11Q96JI7 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.35■□□□□ 0.85
SPG11Q96JI7 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SPG11Q96JI7 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC20.35■□□□□ 0.85
SPG11Q96JI7 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
SPG11Q96JI7 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.34■□□□□ 0.85
SPG11Q96JI7 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.34■□□□□ 0.85
SPG11Q96JI7 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SPG11Q96JI7 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.34■□□□□ 0.85
SPG11Q96JI7 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.34■□□□□ 0.85
SPG11Q96JI7 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC20.33■□□□□ 0.85
SPG11Q96JI7 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC20.33■□□□□ 0.85
SPG11Q96JI7 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SPG11Q96JI7 LINC01003-201ENST00000564834 1764 ntBASIC20.32■□□□□ 0.84
SPG11Q96JI7 PBX2P1-201ENST00000493219 1291 ntBASIC20.32■□□□□ 0.84
SPG11Q96JI7 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC20.32■□□□□ 0.84
SPG11Q96JI7 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC20.32■□□□□ 0.84
SPG11Q96JI7 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.32■□□□□ 0.84
SPG11Q96JI7 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SPG11Q96JI7 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SPG11Q96JI7 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SPG11Q96JI7 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.32■□□□□ 0.84
SPG11Q96JI7 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SPG11Q96JI7 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SPG11Q96JI7 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SPG11Q96JI7 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.31■□□□□ 0.84
SPG11Q96JI7 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SPG11Q96JI7 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SPG11Q96JI7 AC011551.1-201ENST00000614101 683 ntBASIC20.31■□□□□ 0.84
SPG11Q96JI7 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
SPG11Q96JI7 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
SPG11Q96JI7 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SPG11Q96JI7 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SPG11Q96JI7 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SPG11Q96JI7 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SPG11Q96JI7 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SPG11Q96JI7 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SPG11Q96JI7 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.29■□□□□ 0.84
SPG11Q96JI7 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SPG11Q96JI7 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SPG11Q96JI7 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC20.29■□□□□ 0.84
SPG11Q96JI7 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC20.29■□□□□ 0.84
SPG11Q96JI7 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.29■□□□□ 0.84
SPG11Q96JI7 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SPG11Q96JI7 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SPG11Q96JI7 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SPG11Q96JI7 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SPG11Q96JI7 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.28■□□□□ 0.84
SPG11Q96JI7 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SPG11Q96JI7 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
SPG11Q96JI7 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SPG11Q96JI7 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SPG11Q96JI7 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SPG11Q96JI7 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
SPG11Q96JI7 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SPG11Q96JI7 PROC-203ENST00000409048 1586 ntTSL 5 BASIC20.28■□□□□ 0.84
SPG11Q96JI7 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
SPG11Q96JI7 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC20.27■□□□□ 0.84
SPG11Q96JI7 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SPG11Q96JI7 EDA-201ENST00000338901 1233 ntBASIC20.27■□□□□ 0.84
SPG11Q96JI7 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SPG11Q96JI7 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC20.26■□□□□ 0.83
SPG11Q96JI7 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.26■□□□□ 0.83
SPG11Q96JI7 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC20.26■□□□□ 0.83
SPG11Q96JI7 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.26■□□□□ 0.83
SPG11Q96JI7 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.26■□□□□ 0.83
SPG11Q96JI7 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.26■□□□□ 0.83
SPG11Q96JI7 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SPG11Q96JI7 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SPG11Q96JI7 AF131216.4-201ENST00000638924 1588 ntBASIC20.26■□□□□ 0.83
SPG11Q96JI7 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SPG11Q96JI7 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
SPG11Q96JI7 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SPG11Q96JI7 AL162430.1-201ENST00000480705 870 ntBASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms