Protein–RNA interactions for Protein: Q96FL8

SLC47A1, Multidrug and toxin extrusion protein 1, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1Q96FL8 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
SLC47A1Q96FL8 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SLC47A1Q96FL8 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SLC47A1Q96FL8 AC126177.7-201ENST00000547904 679 ntBASIC22.28■■□□□ 1.16
SLC47A1Q96FL8 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
SLC47A1Q96FL8 MIR7108-201ENST00000614319 87 ntBASIC22.28■■□□□ 1.16
SLC47A1Q96FL8 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
SLC47A1Q96FL8 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SLC47A1Q96FL8 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
SLC47A1Q96FL8 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
SLC47A1Q96FL8 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SLC47A1Q96FL8 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC22.27■■□□□ 1.16
SLC47A1Q96FL8 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
SLC47A1Q96FL8 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SLC47A1Q96FL8 AC097639.1-201ENST00000565519 1891 ntBASIC22.27■■□□□ 1.16
SLC47A1Q96FL8 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.15
SLC47A1Q96FL8 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
SLC47A1Q96FL8 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SLC47A1Q96FL8 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SLC47A1Q96FL8 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
SLC47A1Q96FL8 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SLC47A1Q96FL8 CASK-201ENST00000378154 2494 ntTSL 5 BASIC22.25■■□□□ 1.15
SLC47A1Q96FL8 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
SLC47A1Q96FL8 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
SLC47A1Q96FL8 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SLC47A1Q96FL8 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
SLC47A1Q96FL8 MED25-210ENST00000612854 801 ntTSL 5 BASIC22.25■■□□□ 1.15
SLC47A1Q96FL8 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
SLC47A1Q96FL8 MED25-214ENST00000622402 642 ntTSL 5 BASIC22.25■■□□□ 1.15
SLC47A1Q96FL8 SLC6A10P-202ENST00000431994 2058 ntBASIC22.25■■□□□ 1.15
SLC47A1Q96FL8 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
SLC47A1Q96FL8 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
SLC47A1Q96FL8 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC22.25■■□□□ 1.15
SLC47A1Q96FL8 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC22.25■■□□□ 1.15
SLC47A1Q96FL8 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SLC47A1Q96FL8 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
SLC47A1Q96FL8 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
SLC47A1Q96FL8 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
SLC47A1Q96FL8 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SLC47A1Q96FL8 LINC00543-201ENST00000567234 1845 ntBASIC22.24■■□□□ 1.15
SLC47A1Q96FL8 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SLC47A1Q96FL8 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
SLC47A1Q96FL8 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SLC47A1Q96FL8 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC22.23■■□□□ 1.15
SLC47A1Q96FL8 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC22.23■■□□□ 1.15
SLC47A1Q96FL8 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC22.23■■□□□ 1.15
SLC47A1Q96FL8 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC22.22■■□□□ 1.15
SLC47A1Q96FL8 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC22.22■■□□□ 1.15
SLC47A1Q96FL8 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC22.22■■□□□ 1.15
SLC47A1Q96FL8 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
SLC47A1Q96FL8 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC22.22■■□□□ 1.15
SLC47A1Q96FL8 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SLC47A1Q96FL8 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SLC47A1Q96FL8 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SLC47A1Q96FL8 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
SLC47A1Q96FL8 AC012676.1-201ENST00000574705 1949 ntBASIC22.21■■□□□ 1.15
SLC47A1Q96FL8 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SLC47A1Q96FL8 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SLC47A1Q96FL8 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SLC47A1Q96FL8 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
SLC47A1Q96FL8 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
SLC47A1Q96FL8 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC22.21■■□□□ 1.15
SLC47A1Q96FL8 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC22.21■■□□□ 1.15
SLC47A1Q96FL8 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC22.21■■□□□ 1.15
SLC47A1Q96FL8 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
SLC47A1Q96FL8 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SLC47A1Q96FL8 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC22.21■■□□□ 1.15
SLC47A1Q96FL8 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC22.21■■□□□ 1.15
SLC47A1Q96FL8 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
SLC47A1Q96FL8 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
SLC47A1Q96FL8 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
SLC47A1Q96FL8 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC22.2■■□□□ 1.14
SLC47A1Q96FL8 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
SLC47A1Q96FL8 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
SLC47A1Q96FL8 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
SLC47A1Q96FL8 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
SLC47A1Q96FL8 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
SLC47A1Q96FL8 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
SLC47A1Q96FL8 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
SLC47A1Q96FL8 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC22.19■■□□□ 1.14
SLC47A1Q96FL8 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
SLC47A1Q96FL8 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC22.19■■□□□ 1.14
SLC47A1Q96FL8 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
SLC47A1Q96FL8 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
SLC47A1Q96FL8 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
SLC47A1Q96FL8 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
SLC47A1Q96FL8 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
SLC47A1Q96FL8 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC22.18■■□□□ 1.14
SLC47A1Q96FL8 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
SLC47A1Q96FL8 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
SLC47A1Q96FL8 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
SLC47A1Q96FL8 PVT1-219ENST00000523427 938 ntTSL 3 BASIC22.17■■□□□ 1.14
SLC47A1Q96FL8 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC22.17■■□□□ 1.14
SLC47A1Q96FL8 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
SLC47A1Q96FL8 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
SLC47A1Q96FL8 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
SLC47A1Q96FL8 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
SLC47A1Q96FL8 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
SLC47A1Q96FL8 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
SLC47A1Q96FL8 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC22.16■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 345.7 ms